RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 TRAV12-1A0A0B4J245 112 aa7.9□□□□□ -1.14
SEC13-206ENST00000397102 USH2AO75445 5202 aa7.89□□□□□ -1.15
SEC13-206ENST00000397102 ZNF73O43830 326 aaPredicted RBP7.89□□□□□ -1.15
SEC13-206ENST00000397102 NDUFC2O95298 119 aa7.88□□□□□ -1.15
SEC13-206ENST00000397102 CFC1P0CG37 223 aa7.88□□□□□ -1.15
SEC13-206ENST00000397102 CD164Q04900 197 aa7.88□□□□□ -1.15
SEC13-206ENST00000397102 MIEN1Q9BRT3 115 aa7.87□□□□□ -1.15
SEC13-206ENST00000397102 LAMTOR3Q9UHA4 124 aa7.87□□□□□ -1.15
SEC13-206ENST00000397102 HINT1P49773 126 aaPredicted RBP7.85□□□□□ -1.15
SEC13-206ENST00000397102 Q5XG85 94 aa7.85□□□□□ -1.15
SEC13-206ENST00000397102 IFI27L1Q96BM0 104 aa7.85□□□□□ -1.15
SEC13-206ENST00000397102 C1orf195Q5TG92 126 aa7.84□□□□□ -1.15
SEC13-206ENST00000397102 COMMD7Q86VX2 200 aa7.84□□□□□ -1.15
SEC13-206ENST00000397102 TSPEAR-AS2P59090 65 aa7.83□□□□□ -1.16
SEC13-206ENST00000397102 RPS10P5Q9NQ39 176 aa7.83□□□□□ -1.16
SEC13-206ENST00000397102 TRAPPC1Q9Y5R8 145 aa7.83□□□□□ -1.16
SEC13-206ENST00000397102 TMEM218A2RU14 115 aa7.82□□□□□ -1.16
SEC13-206ENST00000397102 H7C2G1 150 aa7.82□□□□□ -1.16
SEC13-206ENST00000397102 IFITM2Q01629 132 aa7.82□□□□□ -1.16
SEC13-206ENST00000397102 Q6Q795 121 aa7.82□□□□□ -1.16
SEC13-206ENST00000397102 KRTAP4-8Q9BYQ9 185 aa7.82□□□□□ -1.16
SEC13-206ENST00000397102 PRO1933Q9H354 126 aa7.82□□□□□ -1.16
SEC13-206ENST00000397102 CBY1Q9Y3M2 126 aa7.82□□□□□ -1.16
SEC13-206ENST00000397102 KRTAP9-8Q9BYQ0 159 aa7.81□□□□□ -1.16
SEC13-206ENST00000397102 DHRS4-AS1Q9P1J3 65 aa7.81□□□□□ -1.16
SEC13-206ENST00000397102 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
SEC13-206ENST00000397102 LEPROTO15243 131 aa7.8□□□□□ -1.16
SEC13-206ENST00000397102 UQCC3Q6UW78 93 aa7.8□□□□□ -1.16
SEC13-206ENST00000397102 Q1RN00 199 aa7.78□□□□□ -1.16
SEC13-206ENST00000397102 SOSTDC1Q6X4U4 206 aa7.78□□□□□ -1.16
SEC13-206ENST00000397102 SMIM29Q86T20 159 aa7.78□□□□□ -1.16
SEC13-206ENST00000397102 J3QQQ9 107 aa7.77□□□□□ -1.17
SEC13-206ENST00000397102 NMUP48645 174 aa7.77□□□□□ -1.17
SEC13-206ENST00000397102 CLLU1Q5K131 121 aa7.77□□□□□ -1.17
SEC13-206ENST00000397102 CHCHD1Q96BP2 118 aaKnown RBP7.77□□□□□ -1.17
SEC13-206ENST00000397102 EIF4EBP3O60516 100 aaPredicted RBP7.76□□□□□ -1.17
SEC13-206ENST00000397102 AKR1D1P51857 326 aa7.76□□□□□ -1.17
SEC13-206ENST00000397102 NPC2P61916 151 aa7.76□□□□□ -1.17
SEC13-206ENST00000397102 RHEBQ15382 184 aa7.75□□□□□ -1.17
SEC13-206ENST00000397102 TAL2Q16559 108 aa7.75□□□□□ -1.17
SEC13-206ENST00000397102 KRTAP19-1Q8IUB9 90 aa7.74□□□□□ -1.17
SEC13-206ENST00000397102 TEX49A0A1B0GTD5 131 aa7.73□□□□□ -1.17
SEC13-206ENST00000397102 LGALS3P17931 250 aaKnown RBP7.73□□□□□ -1.17
SEC13-206ENST00000397102 ELOF1P60002 83 aaKnown RBP7.73□□□□□ -1.17
SEC13-206ENST00000397102 DEFB105AQ8NG35 78 aa7.73□□□□□ -1.17
SEC13-206ENST00000397102 H0Y8G0 127 aa7.72□□□□□ -1.17
SEC13-206ENST00000397102 HERVK_113P61574 105 aa7.72□□□□□ -1.17
SEC13-206ENST00000397102 ADAMTSL4-AS1Q5T5F5 129 aa7.72□□□□□ -1.17
SEC13-206ENST00000397102 OR13C6PQ8NH95 151 aa7.72□□□□□ -1.17
SEC13-206ENST00000397102 COX7BP24311 80 aa7.71□□□□□ -1.18
SEC13-206ENST00000397102 PLNP26678 52 aa7.71□□□□□ -1.18
SEC13-206ENST00000397102 A0A0G2JQZ4 141 aa7.7□□□□□ -1.18
SEC13-206ENST00000397102 TCL1BO95988 128 aa7.7□□□□□ -1.18
SEC13-206ENST00000397102 ATP11AUNQ6ZP68 121 aa7.7□□□□□ -1.18
SEC13-206ENST00000397102 SPANXCQ9NY87 97 aa7.7□□□□□ -1.18
SEC13-206ENST00000397102 A0A0J9YXY3 114 aa7.69□□□□□ -1.18
SEC13-206ENST00000397102 MACF1Q9UPN3 7388 aaKnown RBP7.69□□□□□ -1.18
SEC13-206ENST00000397102 C20orf202A1L168 122 aa7.68□□□□□ -1.18
SEC13-206ENST00000397102 HSBP1O75506 76 aa7.68□□□□□ -1.18
SEC13-206ENST00000397102 C10orf91Q5T1B1 145 aa7.68□□□□□ -1.18
SEC13-206ENST00000397102 Q75L30 129 aa7.68□□□□□ -1.18
SEC13-206ENST00000397102 SPANXDQ9BXN6 97 aa7.68□□□□□ -1.18
SEC13-206ENST00000397102 SYNE2Q8WXH0 6885 aaKnown RBP7.68□□□□□ -1.18
SEC13-206ENST00000397102 C6orf99Q4VX62 202 aa7.67□□□□□ -1.18
SEC13-206ENST00000397102 IGLV5-48A0A075B6I7 105 aa7.65□□□□□ -1.18
SEC13-206ENST00000397102 DPM2O94777 84 aa7.65□□□□□ -1.18
SEC13-206ENST00000397102 MT2AP02795 61 aa7.65□□□□□ -1.18
SEC13-206ENST00000397102 LINC00308Q8TCZ7 52 aa7.65□□□□□ -1.18
SEC13-206ENST00000397102 LEPROTL1O95214 131 aa7.64□□□□□ -1.19
SEC13-206ENST00000397102 PCP2Q8IVA1 136 aa7.64□□□□□ -1.19
SEC13-206ENST00000397102 IGKCP01834 107 aa7.63□□□□□ -1.19
SEC13-206ENST00000397102 TRBV7-6A0A0J9YX20 115 aa7.62□□□□□ -1.19
SEC13-206ENST00000397102 OBSCN-AS1Q96MR7 158 aa7.62□□□□□ -1.19
SEC13-206ENST00000397102 LITAFQ99732 161 aa7.62□□□□□ -1.19
SEC13-206ENST00000397102 PMCHL2Q9BQD1 86 aa7.62□□□□□ -1.19
SEC13-206ENST00000397102 E9PLD3 99 aa7.6□□□□□ -1.19
SEC13-206ENST00000397102 LINC00518Q8N0U6 118 aa7.6□□□□□ -1.19
SEC13-206ENST00000397102 A0A1B0GWB2 263 aa7.59□□□□□ -1.19
SEC13-206ENST00000397102 TIMM17BO60830 172 aa7.59□□□□□ -1.19
SEC13-206ENST00000397102 MT1FP04733 61 aa7.59□□□□□ -1.19
SEC13-206ENST00000397102 TRBV20-1A0A075B6N2 111 aa7.58□□□□□ -1.2
SEC13-206ENST00000397102 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
SEC13-206ENST00000397102 HSPB8Q9UJY1 196 aa7.57□□□□□ -1.2
SEC13-206ENST00000397102 YPEL4Q96NS1 127 aa7.55□□□□□ -1.2
SEC13-206ENST00000397102 LINC00846Q9NV44 126 aa7.55□□□□□ -1.2
SEC13-206ENST00000397102 SERF1AO75920 110 aa7.54□□□□□ -1.2
SEC13-206ENST00000397102 FABP4P15090 132 aa7.54□□□□□ -1.2
SEC13-206ENST00000397102 LINC00310P59036 64 aa7.54□□□□□ -1.2
SEC13-206ENST00000397102 TRBV7-7A0A0K0K1E9 115 aa7.53□□□□□ -1.2
SEC13-206ENST00000397102 F8WEM9 126 aa7.53□□□□□ -1.2
SEC13-206ENST00000397102 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
SEC13-206ENST00000397102 Q96NJ1 140 aa7.53□□□□□ -1.2
SEC13-206ENST00000397102 A4D1N5 150 aa7.52□□□□□ -1.21
SEC13-206ENST00000397102 SNAPINO95295 136 aa7.52□□□□□ -1.21
SEC13-206ENST00000397102 NHP2Q9NX24 153 aaKnown RBP7.52□□□□□ -1.21
SEC13-206ENST00000397102 APOC3P02656 99 aa7.51□□□□□ -1.21
SEC13-206ENST00000397102 C20orf166-AS1Q96NR2 134 aa7.51□□□□□ -1.21
SEC13-206ENST00000397102 Q6JHZ5 121 aa7.5□□□□□ -1.21
SEC13-206ENST00000397102 CLEC2BQ92478 149 aa7.5□□□□□ -1.21
SEC13-206ENST00000397102 ZNF815PA8K554 130 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms