RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 LINC00337Q8N6G1 96 aa13.08□□□□□ -0.32
FXN-202ENST00000396364 ZNF861PO60384 105 aa13.07□□□□□ -0.32
FXN-202ENST00000396364 CEND1Q8N111 149 aa13.07□□□□□ -0.32
FXN-202ENST00000396364 DIRC1Q969H9 104 aa13.06□□□□□ -0.32
FXN-202ENST00000396364 PRO1933Q9H354 126 aa13.06□□□□□ -0.32
FXN-202ENST00000396364 SPRR1AP35321 89 aa13.04□□□□□ -0.32
FXN-202ENST00000396364 KRTAP4-5Q9BYR2 181 aa13.04□□□□□ -0.32
FXN-202ENST00000396364 SRRM2Q9UQ35 2752 aaKnown RBP13.04□□□□□ -0.32
FXN-202ENST00000396364 ZNF73O43830 326 aaPredicted RBP13.03□□□□□ -0.32
FXN-202ENST00000396364 H0Y9J4 135 aa13.02□□□□□ -0.33
FXN-202ENST00000396364 RAB37Q96AX2 223 aa13.02□□□□□ -0.33
FXN-202ENST00000396364 PRLHP81277 87 aa12.99□□□□□ -0.33
FXN-202ENST00000396364 A0A0B4J2C4 111 aa12.98□□□□□ -0.33
FXN-202ENST00000396364 KRTAP4-16G5E9R7 235 aaPredicted RBP12.97□□□□□ -0.33
FXN-202ENST00000396364 KRTAP13-1Q8IUC0 172 aa12.97□□□□□ -0.33
FXN-202ENST00000396364 RPL13AP40429 203 aaKnown RBP12.96□□□□□ -0.33
FXN-202ENST00000396364 TRBV7-6A0A0J9YX20 115 aa12.95□□□□□ -0.34
FXN-202ENST00000396364 B5MCH6 92 aa12.95□□□□□ -0.34
FXN-202ENST00000396364 CFC1BP0CG36 223 aa12.95□□□□□ -0.34
FXN-202ENST00000396364 CFC1P0CG37 223 aa12.95□□□□□ -0.34
FXN-202ENST00000396364 C6orf99Q4VX62 202 aa12.95□□□□□ -0.34
FXN-202ENST00000396364 Q6ZRX8 168 aa12.95□□□□□ -0.34
FXN-202ENST00000396364 HIGD2AQ9BW72 106 aa12.95□□□□□ -0.34
FXN-202ENST00000396364 M0R143 59 aa12.94□□□□□ -0.34
FXN-202ENST00000396364 FXYD2P54710 66 aa12.94□□□□□ -0.34
FXN-202ENST00000396364 VAMP3Q15836 100 aa12.94□□□□□ -0.34
FXN-202ENST00000396364 A0A1B0GWB2 263 aa12.92□□□□□ -0.34
FXN-202ENST00000396364 COX7BP24311 80 aa12.92□□□□□ -0.34
FXN-202ENST00000396364 SMIM11BQ8TCY0 68 aa12.92□□□□□ -0.34
FXN-202ENST00000396364 PRO1854Q9UHT4 67 aa12.92□□□□□ -0.34
FXN-202ENST00000396364 NHP2Q9NX24 153 aaKnown RBP12.91□□□□□ -0.34
FXN-202ENST00000396364 ZNF706Q9Y5V0 76 aaPredicted RBP12.91□□□□□ -0.34
FXN-202ENST00000396364 CTAG1AP78358 180 aa12.9□□□□□ -0.34
FXN-202ENST00000396364 Q1RN00 199 aa12.9□□□□□ -0.34
FXN-202ENST00000396364 DHRS4-AS1Q9P1J3 65 aa12.9□□□□□ -0.34
FXN-202ENST00000396364 ELOF1P60002 83 aaKnown RBP12.89□□□□□ -0.35
FXN-202ENST00000396364 H7C2G1 150 aa12.88□□□□□ -0.35
FXN-202ENST00000396364 OXTP01178 125 aa12.88□□□□□ -0.35
FXN-202ENST00000396364 BVES-AS1Q5T3Y7 98 aa12.88□□□□□ -0.35
FXN-202ENST00000396364 SMCR5Q8TEV8 140 aa12.86□□□□□ -0.35
FXN-202ENST00000396364 PKHD1L1Q86WI1 4243 aa12.84□□□□□ -0.35
FXN-202ENST00000396364 SLC25A20O43772 301 aa12.84□□□□□ -0.35
FXN-202ENST00000396364 Q9BRP9 147 aa12.83□□□□□ -0.36
FXN-202ENST00000396364 SNCGO76070 127 aa12.82□□□□□ -0.36
FXN-202ENST00000396364 KRTAP29-1A8MX34 341 aaPredicted RBP12.81□□□□□ -0.36
FXN-202ENST00000396364 LINC01600Q96MT4 127 aa12.81□□□□□ -0.36
FXN-202ENST00000396364 FLG2Q5D862 2391 aaPredicted RBP12.81□□□□□ -0.36
FXN-202ENST00000396364 ABCA13Q86UQ4 5058 aa12.81□□□□□ -0.36
FXN-202ENST00000396364 H0YGX0 51 aa12.79□□□□□ -0.36
FXN-202ENST00000396364 K7ERJ3 54 aa12.78□□□□□ -0.36
FXN-202ENST00000396364 COX6CP09669 75 aa12.78□□□□□ -0.36
FXN-202ENST00000396364 PSMB2P49721 201 aa12.78□□□□□ -0.36
FXN-202ENST00000396364 FAM229BQ4G0N7 80 aa12.78□□□□□ -0.36
FXN-202ENST00000396364 SPRR4Q96PI1 79 aa12.78□□□□□ -0.36
FXN-202ENST00000396364 J3QL48 77 aa12.77□□□□□ -0.37
FXN-202ENST00000396364 KRTAP1-4P0C5Y4 121 aa12.76□□□□□ -0.37
FXN-202ENST00000396364 CRYGAP11844 174 aa12.76□□□□□ -0.37
FXN-202ENST00000396364 ERC2-IT1O76042 136 aa12.75□□□□□ -0.37
FXN-202ENST00000396364 LINC00575Q6W349 94 aa12.74□□□□□ -0.37
FXN-202ENST00000396364 hADV29S1A0JD25 119 aa12.73□□□□□ -0.37
FXN-202ENST00000396364 BATFQ16520 125 aa12.73□□□□□ -0.37
FXN-202ENST00000396364 GAGE2AQ6NT46 116 aa12.73□□□□□ -0.37
FXN-202ENST00000396364 TSPAN13O95857 204 aa12.72□□□□□ -0.37
FXN-202ENST00000396364 PCLOQ9Y6V0 5065 aa12.71□□□□□ -0.38
FXN-202ENST00000396364 TRIAP1O43715 76 aa12.7□□□□□ -0.38
FXN-202ENST00000396364 LINC00483Q53H64 154 aa12.69□□□□□ -0.38
FXN-202ENST00000396364 PRR26Q8N8Z3 221 aa12.69□□□□□ -0.38
FXN-202ENST00000396364 A0A1B0GX51 115 aa12.68□□□□□ -0.38
FXN-202ENST00000396364 ST20-AS1Q8NBB2 130 aa12.67□□□□□ -0.38
FXN-202ENST00000396364 ANAPC11Q9NYG5 84 aa12.67□□□□□ -0.38
FXN-202ENST00000396364 MYCBP2O75592 4640 aa12.66□□□□□ -0.38
FXN-202ENST00000396364 TEX49A0A1B0GTD5 131 aa12.66□□□□□ -0.38
FXN-202ENST00000396364 GHRHP01286 108 aa12.66□□□□□ -0.38
FXN-202ENST00000396364 SCGB1C2P0DMR2 95 aa12.66□□□□□ -0.38
FXN-202ENST00000396364 TYMSOSQ8TAI1 123 aa12.66□□□□□ -0.38
FXN-202ENST00000396364 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.65□□□□□ -0.38
FXN-202ENST00000396364 DEFB105AQ8NG35 78 aa12.65□□□□□ -0.38
FXN-202ENST00000396364 A0A087X002 238 aa12.64□□□□□ -0.39
FXN-202ENST00000396364 SPRR1BP22528 89 aa12.64□□□□□ -0.39
FXN-202ENST00000396364 KRTAP10-8P60410 259 aa12.64□□□□□ -0.39
FXN-202ENST00000396364 OCIAD2Q56VL3 154 aa12.63□□□□□ -0.39
FXN-202ENST00000396364 Q6ZQY7 126 aa12.63□□□□□ -0.39
FXN-202ENST00000396364 LAMTOR3Q9UHA4 124 aa12.63□□□□□ -0.39
FXN-202ENST00000396364 IGLV5-48A0A075B6I7 105 aa12.62□□□□□ -0.39
FXN-202ENST00000396364 DNAL4O96015 105 aa12.62□□□□□ -0.39
FXN-202ENST00000396364 LYRM7Q5U5X0 104 aa12.62□□□□□ -0.39
FXN-202ENST00000396364 PCP4L1A6NKN8 68 aa12.6□□□□□ -0.39
FXN-202ENST00000396364 MT1HL1P0DM35 61 aa12.6□□□□□ -0.39
FXN-202ENST00000396364 PPDPFLQ8WWR9 84 aa12.6□□□□□ -0.39
FXN-202ENST00000396364 FAT3Q8TDW7 4589 aa12.6□□□□□ -0.39
FXN-202ENST00000396364 LRP1Q07954 4544 aaKnown RBP12.6□□□□□ -0.39
FXN-202ENST00000396364 IGLV9-49A0A0B4J1Y8 123 aa12.58□□□□□ -0.4
FXN-202ENST00000396364 FAM218AQ96MZ4 157 aa12.58□□□□□ -0.4
FXN-202ENST00000396364 CLEC2BQ92478 149 aa12.57□□□□□ -0.4
FXN-202ENST00000396364 H3BQ85 93 aa12.56□□□□□ -0.4
FXN-202ENST00000396364 KRTAP13-2Q52LG2 175 aa12.56□□□□□ -0.4
FXN-202ENST00000396364 C9orf153Q5TBE3 101 aa12.56□□□□□ -0.4
FXN-202ENST00000396364 SSBP3-AS1Q7Z2R9 100 aa12.55□□□□□ -0.4
FXN-202ENST00000396364 C3orf22Q8N5N4 141 aa12.55□□□□□ -0.4
FXN-202ENST00000396364 SNHG12Q9BXW3 62 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms