RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 S100A2P29034 98 aa10.21□□□□□ -0.77
UPK3A-202ENST00000396082 AKR1D1P51857 326 aa10.21□□□□□ -0.77
UPK3A-202ENST00000396082 SCGB1D4Q6XE38 83 aa10.21□□□□□ -0.77
UPK3A-202ENST00000396082 PPDPFQ9H3Y8 114 aa10.21□□□□□ -0.77
UPK3A-202ENST00000396082 Q6ZRX8 168 aa10.2□□□□□ -0.78
UPK3A-202ENST00000396082 OR13C6PQ8NH95 151 aa10.2□□□□□ -0.78
UPK3A-202ENST00000396082 CBY1Q9Y3M2 126 aa10.2□□□□□ -0.78
UPK3A-202ENST00000396082 ANKRD39Q53RE8 183 aa10.19□□□□□ -0.78
UPK3A-202ENST00000396082 ZNF73O43830 326 aaPredicted RBP10.18□□□□□ -0.78
UPK3A-202ENST00000396082 JOSD1Q15040 202 aaPredicted RBP10.18□□□□□ -0.78
UPK3A-202ENST00000396082 GAGE2AQ6NT46 116 aa10.18□□□□□ -0.78
UPK3A-202ENST00000396082 HINT1P49773 126 aaPredicted RBP10.17□□□□□ -0.78
UPK3A-202ENST00000396082 ERC2-IT1O76042 136 aa10.16□□□□□ -0.78
UPK3A-202ENST00000396082 S100A6P06703 90 aa10.16□□□□□ -0.78
UPK3A-202ENST00000396082 HIST3H2BBQ8N257 126 aa10.16□□□□□ -0.78
UPK3A-202ENST00000396082 Q9BRP9 147 aa10.16□□□□□ -0.78
UPK3A-202ENST00000396082 C4orf48Q5BLP8 95 aa10.14□□□□□ -0.79
UPK3A-202ENST00000396082 COPS9Q8WXC6 57 aa10.14□□□□□ -0.79
UPK3A-202ENST00000396082 HIST1H2BLQ99880 126 aa10.14□□□□□ -0.79
UPK3A-202ENST00000396082 RETNLBQ9BQ08 111 aa10.14□□□□□ -0.79
UPK3A-202ENST00000396082 SPANXDQ9BXN6 97 aa10.14□□□□□ -0.79
UPK3A-202ENST00000396082 SNRPEP62304 92 aaKnown RBP10.13□□□□□ -0.79
UPK3A-202ENST00000396082 LINC00483Q53H64 154 aa10.13□□□□□ -0.79
UPK3A-202ENST00000396082 SPAG11AQ6PDA7 123 aa10.13□□□□□ -0.79
UPK3A-202ENST00000396082 LINC00518Q8N0U6 118 aa10.13□□□□□ -0.79
UPK3A-202ENST00000396082 LPAP08519 4548 aa10.12□□□□□ -0.79
UPK3A-202ENST00000396082 PCP2Q8IVA1 136 aa10.12□□□□□ -0.79
UPK3A-202ENST00000396082 HSBP1L1C9JCN9 74 aa10.11□□□□□ -0.79
UPK3A-202ENST00000396082 CTAG1AP78358 180 aa10.11□□□□□ -0.79
UPK3A-202ENST00000396082 Q8NBF4 154 aa10.11□□□□□ -0.79
UPK3A-202ENST00000396082 IGLV9-49A0A0B4J1Y8 123 aa10.1□□□□□ -0.79
UPK3A-202ENST00000396082 IFITM1P13164 125 aa10.1□□□□□ -0.79
UPK3A-202ENST00000396082 Q6ZVH6 145 aa10.09□□□□□ -0.79
UPK3A-202ENST00000396082 MOBPQ13875 183 aa10.08□□□□□ -0.8
UPK3A-202ENST00000396082 C6orf99Q4VX62 202 aa10.06□□□□□ -0.8
UPK3A-202ENST00000396082 MUSTN1Q8IVN3 82 aa10.06□□□□□ -0.8
UPK3A-202ENST00000396082 A6NDN8 102 aa10.05□□□□□ -0.8
UPK3A-202ENST00000396082 COX7BP24311 80 aa10.05□□□□□ -0.8
UPK3A-202ENST00000396082 C9orf153Q5TBE3 101 aa10.05□□□□□ -0.8
UPK3A-202ENST00000396082 ST20-AS1Q8NBB2 130 aa10.05□□□□□ -0.8
UPK3A-202ENST00000396082 DHRS4-AS1Q9P1J3 65 aa10.05□□□□□ -0.8
UPK3A-202ENST00000396082 IGLV7-46A0A075B6I9 117 aa10.03□□□□□ -0.8
UPK3A-202ENST00000396082 C5orf52A6NGY3 159 aa10.03□□□□□ -0.8
UPK3A-202ENST00000396082 SSBP3-AS1Q7Z2R9 100 aa10.03□□□□□ -0.8
UPK3A-202ENST00000396082 SCGB1D1O95968 90 aa10.02□□□□□ -0.81
UPK3A-202ENST00000396082 SPINK1P00995 79 aa10.02□□□□□ -0.81
UPK3A-202ENST00000396082 ELOF1P60002 83 aaKnown RBP10.02□□□□□ -0.81
UPK3A-202ENST00000396082 SLC25A34Q6PIV7 304 aa10□□□□□ -0.81
UPK3A-202ENST00000396082 TRAV13-2A0A0B4J235 113 aa9.99□□□□□ -0.81
UPK3A-202ENST00000396082 A0A1B0GWB2 263 aa9.98□□□□□ -0.81
UPK3A-202ENST00000396082 CDIP1Q9H305 208 aa9.98□□□□□ -0.81
UPK3A-202ENST00000396082 TRBV7-6A0A0J9YX20 115 aa9.97□□□□□ -0.81
UPK3A-202ENST00000396082 TPRXLQ17RH7 258 aa9.97□□□□□ -0.81
UPK3A-202ENST00000396082 FP248Q71RG6 208 aaPredicted RBP9.97□□□□□ -0.81
UPK3A-202ENST00000396082 RNF213Q63HN8 5207 aa9.97□□□□□ -0.81
UPK3A-202ENST00000396082 SPRR1BP22528 89 aa9.96□□□□□ -0.82
UPK3A-202ENST00000396082 TAL2Q16559 108 aa9.96□□□□□ -0.82
UPK3A-202ENST00000396082 LAMTOR3Q9UHA4 124 aa9.96□□□□□ -0.82
UPK3A-202ENST00000396082 DEFB105AQ8NG35 78 aa9.95□□□□□ -0.82
UPK3A-202ENST00000396082 RPS29P62273 56 aaKnown RBP9.94□□□□□ -0.82
UPK3A-202ENST00000396082 A4D1N5 150 aa9.93□□□□□ -0.82
UPK3A-202ENST00000396082 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
UPK3A-202ENST00000396082 TEX49A0A1B0GTD5 131 aa9.91□□□□□ -0.82
UPK3A-202ENST00000396082 Q1RN00 199 aa9.91□□□□□ -0.82
UPK3A-202ENST00000396082 NHP2Q9NX24 153 aaKnown RBP9.91□□□□□ -0.82
UPK3A-202ENST00000396082 SLC25A20O43772 301 aa9.9□□□□□ -0.82
UPK3A-202ENST00000396082 COX8AP10176 69 aa9.9□□□□□ -0.82
UPK3A-202ENST00000396082 Q8N377 158 aa9.9□□□□□ -0.82
UPK3A-202ENST00000396082 HIST1H4GQ99525 98 aa9.9□□□□□ -0.82
UPK3A-202ENST00000396082 VAMP3Q15836 100 aa9.89□□□□□ -0.83
UPK3A-202ENST00000396082 HRCT1Q6UXD1 115 aa9.87□□□□□ -0.83
UPK3A-202ENST00000396082 C12orf57Q99622 126 aa9.87□□□□□ -0.83
UPK3A-202ENST00000396082 PAM16Q9Y3D7 125 aa9.86□□□□□ -0.83
UPK3A-202ENST00000396082 SPATA45Q537H7 98 aa9.85□□□□□ -0.83
UPK3A-202ENST00000396082 LIMD2Q9BT23 127 aa9.85□□□□□ -0.83
UPK3A-202ENST00000396082 IGLV5-48A0A075B6I7 105 aa9.84□□□□□ -0.83
UPK3A-202ENST00000396082 DLEU1O43261 78 aa9.84□□□□□ -0.83
UPK3A-202ENST00000396082 C14orf144Q96I85 54 aa9.84□□□□□ -0.83
UPK3A-202ENST00000396082 VAMP8Q9BV40 100 aa9.84□□□□□ -0.83
UPK3A-202ENST00000396082 PRO1933Q9H354 126 aa9.84□□□□□ -0.83
UPK3A-202ENST00000396082 KRTAP13-3Q3SY46 172 aa9.83□□□□□ -0.84
UPK3A-202ENST00000396082 LINC01547P58512 204 aaPredicted RBP9.82□□□□□ -0.84
UPK3A-202ENST00000396082 SMIM29Q86T20 159 aa9.81□□□□□ -0.84
UPK3A-202ENST00000396082 A0A0U1RQV1 116 aa9.8□□□□□ -0.84
UPK3A-202ENST00000396082 LINC00575Q6W349 94 aa9.8□□□□□ -0.84
UPK3A-202ENST00000396082 hADV29S1A0JD25 119 aa9.79□□□□□ -0.84
UPK3A-202ENST00000396082 H7C2G1 150 aa9.79□□□□□ -0.84
UPK3A-202ENST00000396082 CD164Q04900 197 aa9.79□□□□□ -0.84
UPK3A-202ENST00000396082 F8WEM9 126 aa9.78□□□□□ -0.84
UPK3A-202ENST00000396082 BVES-AS1Q5T3Y7 98 aa9.78□□□□□ -0.84
UPK3A-202ENST00000396082 RAB37Q96AX2 223 aa9.78□□□□□ -0.84
UPK3A-202ENST00000396082 HIGD1BQ9P298 99 aa9.78□□□□□ -0.84
UPK3A-202ENST00000396082 Q6ZQY7 126 aa9.77□□□□□ -0.85
UPK3A-202ENST00000396082 A0A0G2JQZ4 141 aa9.73□□□□□ -0.85
UPK3A-202ENST00000396082 CFC1BP0CG36 223 aa9.73□□□□□ -0.85
UPK3A-202ENST00000396082 CFC1P0CG37 223 aa9.73□□□□□ -0.85
UPK3A-202ENST00000396082 C2orf91Q6ZV80 131 aa9.73□□□□□ -0.85
UPK3A-202ENST00000396082 MUC17Q685J3 4493 aa9.71□□□□□ -0.85
UPK3A-202ENST00000396082 A0A0B4J2C4 111 aa9.71□□□□□ -0.86
UPK3A-202ENST00000396082 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms