RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 M0R378 163 aa12.85□□□□□ -0.35
RCCD1-201ENST00000394258 BAHCC1Q9P281 2608 aa12.84□□□□□ -0.35
RCCD1-201ENST00000394258 RMI2Q96E14 147 aa12.84□□□□□ -0.35
RCCD1-201ENST00000394258 SCXQ7RTU7 201 aa12.84□□□□□ -0.35
RCCD1-201ENST00000394258 LOC110117498A0A087WWA1 95 aa12.83□□□□□ -0.36
RCCD1-201ENST00000394258 ELOF1P60002 83 aaKnown RBP12.83□□□□□ -0.36
RCCD1-201ENST00000394258 H7BZZ5 65 aa12.83□□□□□ -0.36
RCCD1-201ENST00000394258 CASC10Q5T4H9 136 aa12.82□□□□□ -0.36
RCCD1-201ENST00000394258 ATP5EP2Q5VTU8 51 aa12.82□□□□□ -0.36
RCCD1-201ENST00000394258 LINC00588Q9Y4M8 146 aa12.82□□□□□ -0.36
RCCD1-201ENST00000394258 DNAH10OSP0CZ25 163 aa12.81□□□□□ -0.36
RCCD1-201ENST00000394258 LINC01547P58512 204 aaPredicted RBP12.81□□□□□ -0.36
RCCD1-201ENST00000394258 SERTAD4-AS1Q5TG53 156 aa12.79□□□□□ -0.36
RCCD1-201ENST00000394258 DNAH3Q8TD57 4116 aa12.78□□□□□ -0.36
RCCD1-201ENST00000394258 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.78□□□□□ -0.36
RCCD1-201ENST00000394258 LINC00336Q6ZUF6 198 aa12.78□□□□□ -0.36
RCCD1-201ENST00000394258 Q6ZVQ6 151 aa12.78□□□□□ -0.36
RCCD1-201ENST00000394258 NKAPP1Q8N9T2 125 aa12.76□□□□□ -0.37
RCCD1-201ENST00000394258 F8WEM9 126 aa12.76□□□□□ -0.37
RCCD1-201ENST00000394258 TRAV7A0A075B6U4 112 aa12.75□□□□□ -0.37
RCCD1-201ENST00000394258 LINC00528Q8N1L1 170 aa12.75□□□□□ -0.37
RCCD1-201ENST00000394258 FAM168BA1KXE4 195 aa12.74□□□□□ -0.37
RCCD1-201ENST00000394258 K7EIL1 84 aa12.74□□□□□ -0.37
RCCD1-201ENST00000394258 RPL37AP8A6NKH3 93 aa12.74□□□□□ -0.37
RCCD1-201ENST00000394258 TRBV7-6A0A0J9YX20 115 aa12.73□□□□□ -0.37
RCCD1-201ENST00000394258 C7orf33Q8WU49 177 aa12.73□□□□□ -0.37
RCCD1-201ENST00000394258 TM2D3Q9BRN9 247 aa12.73□□□□□ -0.37
RCCD1-201ENST00000394258 TRBV7-4A0A0J9YYF1 115 aa12.73□□□□□ -0.37
RCCD1-201ENST00000394258 LINC00474Q9P2X8 69 aa12.72□□□□□ -0.37
RCCD1-201ENST00000394258 SERP1Q9Y6X1 66 aa12.72□□□□□ -0.37
RCCD1-201ENST00000394258 STAB2Q8WWQ8 2551 aa12.72□□□□□ -0.37
RCCD1-201ENST00000394258 DEFB105AQ8NG35 78 aa12.72□□□□□ -0.37
RCCD1-201ENST00000394258 HUWE1Q7Z6Z7 4374 aaKnown RBP12.69□□□□□ -0.38
RCCD1-201ENST00000394258 H3BQ85 93 aa12.69□□□□□ -0.38
RCCD1-201ENST00000394258 FP248Q71RG6 208 aaPredicted RBP12.69□□□□□ -0.38
RCCD1-201ENST00000394258 F8WDY8 70 aa12.67□□□□□ -0.38
RCCD1-201ENST00000394258 PDE6GP18545 87 aa12.67□□□□□ -0.38
RCCD1-201ENST00000394258 Q8N9L7 120 aa12.67□□□□□ -0.38
RCCD1-201ENST00000394258 KCNQ1DNQ9H478 68 aa12.67□□□□□ -0.38
RCCD1-201ENST00000394258 KLKP1Q107X0 134 aa12.66□□□□□ -0.38
RCCD1-201ENST00000394258 PRO0628Q9UI54 55 aa12.66□□□□□ -0.38
RCCD1-201ENST00000394258 COL7A1Q02388 2944 aa12.64□□□□□ -0.39
RCCD1-201ENST00000394258 EPM2AB3EWF7 344 aa12.64□□□□□ -0.39
RCCD1-201ENST00000394258 PKIGQ9Y2B9 76 aa12.64□□□□□ -0.39
RCCD1-201ENST00000394258 DNAH1Q9P2D7 4330 aa12.64□□□□□ -0.39
RCCD1-201ENST00000394258 LYSTQ99698 3801 aa12.64□□□□□ -0.39
RCCD1-201ENST00000394258 KRTAP7-1Q8IUC3 87 aa12.62□□□□□ -0.39
RCCD1-201ENST00000394258 TLX1NBP0CAT3 122 aa12.62□□□□□ -0.39
RCCD1-201ENST00000394258 TENM2Q9NT68 2774 aa12.61□□□□□ -0.39
RCCD1-201ENST00000394258 CXCL6P80162 114 aa12.6□□□□□ -0.39
RCCD1-201ENST00000394258 Q8N377 158 aa12.59□□□□□ -0.39
RCCD1-201ENST00000394258 IGLV1-50A0A075B6I6 118 aa12.58□□□□□ -0.4
RCCD1-201ENST00000394258 SMIM26A0A096LP01 95 aa12.58□□□□□ -0.4
RCCD1-201ENST00000394258 C3orf84H3BNL1 204 aa12.58□□□□□ -0.4
RCCD1-201ENST00000394258 Q9BRP9 147 aa12.58□□□□□ -0.4
RCCD1-201ENST00000394258 MPLKIPQ8TAP9 179 aa12.57□□□□□ -0.4
RCCD1-201ENST00000394258 ETDCA0A1B0GVM5 59 aa12.57□□□□□ -0.4
RCCD1-201ENST00000394258 Q6ZRX8 168 aa12.57□□□□□ -0.4
RCCD1-201ENST00000394258 NREPQ16612 68 aa12.56□□□□□ -0.4
RCCD1-201ENST00000394258 KRTAP1-5Q9BYS1 174 aa12.56□□□□□ -0.4
RCCD1-201ENST00000394258 DNAH10Q8IVF4 4471 aa12.56□□□□□ -0.4
RCCD1-201ENST00000394258 FAM229BQ4G0N7 80 aa12.56□□□□□ -0.4
RCCD1-201ENST00000394258 ST20-AS1Q8NBB2 130 aa12.56□□□□□ -0.4
RCCD1-201ENST00000394258 A0A0U1RQV1 116 aa12.55□□□□□ -0.4
RCCD1-201ENST00000394258 PLA2G2DQ9UNK4 145 aa12.55□□□□□ -0.4
RCCD1-201ENST00000394258 BPY2O14599 106 aa12.55□□□□□ -0.4
RCCD1-201ENST00000394258 BCE1O60756 84 aa12.54□□□□□ -0.4
RCCD1-201ENST00000394258 MRPL55Q7Z7F7 128 aaKnown RBP12.54□□□□□ -0.4
RCCD1-201ENST00000394258 BRK1Q8WUW1 75 aa12.54□□□□□ -0.4
RCCD1-201ENST00000394258 KRTAP4-16G5E9R7 235 aaPredicted RBP12.53□□□□□ -0.4
RCCD1-201ENST00000394258 TMEM254Q8TBM7 123 aa12.53□□□□□ -0.4
RCCD1-201ENST00000394258 IGKV2-24A0A0C4DH68 120 aa12.52□□□□□ -0.41
RCCD1-201ENST00000394258 DHRS4-AS1Q9P1J3 65 aa12.52□□□□□ -0.41
RCCD1-201ENST00000394258 ERC2-IT1O76042 136 aa12.51□□□□□ -0.41
RCCD1-201ENST00000394258 PRYO14603 147 aa12.51□□□□□ -0.41
RCCD1-201ENST00000394258 CSMD3Q7Z407 3707 aa12.51□□□□□ -0.41
RCCD1-201ENST00000394258 IGLV5-37A0A075B6J1 123 aa12.5□□□□□ -0.41
RCCD1-201ENST00000394258 UBE2BP63146 152 aa12.5□□□□□ -0.41
RCCD1-201ENST00000394258 PSCAO43653 123 aa12.49□□□□□ -0.41
RCCD1-201ENST00000394258 SPRR1AP35321 89 aa12.49□□□□□ -0.41
RCCD1-201ENST00000394258 UBE2DNLQ8IWF7 75 aa12.48□□□□□ -0.41
RCCD1-201ENST00000394258 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.48□□□□□ -0.41
RCCD1-201ENST00000394258 A0A096LNI7 61 aa12.46□□□□□ -0.41
RCCD1-201ENST00000394258 IGLV5-48A0A075B6I7 105 aa12.45□□□□□ -0.42
RCCD1-201ENST00000394258 IGKV4-1P06312 121 aa12.45□□□□□ -0.42
RCCD1-201ENST00000394258 HIGD2AQ9BW72 106 aa12.45□□□□□ -0.42
RCCD1-201ENST00000394258 DNAH9Q9NYC9 4486 aa12.44□□□□□ -0.42
RCCD1-201ENST00000394258 A0A1W2PNM2 257 aa12.44□□□□□ -0.42
RCCD1-201ENST00000394258 LRCOL1A6NCL2 159 aa12.44□□□□□ -0.42
RCCD1-201ENST00000394258 REG3GQ6UW15 175 aa12.44□□□□□ -0.42
RCCD1-201ENST00000394258 NDUFC1O43677 76 aa12.43□□□□□ -0.42
RCCD1-201ENST00000394258 A0A1W2PNN7 141 aa12.42□□□□□ -0.42
RCCD1-201ENST00000394258 C1orf137Q5JT78 98 aa12.42□□□□□ -0.42
RCCD1-201ENST00000394258 A0A0G2JQZ4 141 aa12.41□□□□□ -0.42
RCCD1-201ENST00000394258 PRLHP81277 87 aa12.4□□□□□ -0.42
RCCD1-201ENST00000394258 FUSP35637 526 aaKnown RBP eCLIP12.4□□□□□ -0.425e-8■■□□□ 13.4
RCCD1-201ENST00000394258 TNP2Q05952 138 aa12.4□□□□□ -0.42
RCCD1-201ENST00000394258 MDFIQ99750 246 aa12.4□□□□□ -0.42
RCCD1-201ENST00000394258 APLNQ9ULZ1 77 aa12.39□□□□□ -0.43
RCCD1-201ENST00000394258 SRRM2Q9UQ35 2752 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms