RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 Q8N377 158 aa9.8□□□□□ -0.84
SNRPA1-202ENST00000394082 J3QQQ9 107 aa9.79□□□□□ -0.84
SNRPA1-202ENST00000394082 GAGE2AQ6NT46 116 aa9.79□□□□□ -0.84
SNRPA1-202ENST00000394082 NMUP48645 174 aa9.78□□□□□ -0.84
SNRPA1-202ENST00000394082 LINC01547P58512 204 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-202ENST00000394082 Q6ZRX8 168 aa9.78□□□□□ -0.84
SNRPA1-202ENST00000394082 SLC25A20O43772 301 aa9.77□□□□□ -0.85
SNRPA1-202ENST00000394082 DDTP30046 118 aa9.77□□□□□ -0.85
SNRPA1-202ENST00000394082 TSPEAR-AS2P59090 65 aa9.77□□□□□ -0.85
SNRPA1-202ENST00000394082 KRTDAPP60985 99 aa9.77□□□□□ -0.85
SNRPA1-202ENST00000394082 MOBPQ13875 183 aa9.77□□□□□ -0.85
SNRPA1-202ENST00000394082 LINC01545Q5VT33 79 aa9.77□□□□□ -0.85
SNRPA1-202ENST00000394082 ERC2-IT1O76042 136 aa9.76□□□□□ -0.85
SNRPA1-202ENST00000394082 C3orf79P0CE67 100 aa9.76□□□□□ -0.85
SNRPA1-202ENST00000394082 Q9BRP9 147 aa9.76□□□□□ -0.85
SNRPA1-202ENST00000394082 SPANXB1Q9NS25 103 aaPredicted RBP9.76□□□□□ -0.85
SNRPA1-202ENST00000394082 IGLV9-49A0A0B4J1Y8 123 aa9.75□□□□□ -0.85
SNRPA1-202ENST00000394082 C20orf202A1L168 122 aa9.75□□□□□ -0.85
SNRPA1-202ENST00000394082 NDUFC2O95298 119 aa9.75□□□□□ -0.85
SNRPA1-202ENST00000394082 E9PLD3 99 aa9.74□□□□□ -0.85
SNRPA1-202ENST00000394082 XP32Q5T750 250 aa9.74□□□□□ -0.85
SNRPA1-202ENST00000394082 KRTAP4-1Q9BYQ7 146 aa9.74□□□□□ -0.85
SNRPA1-202ENST00000394082 C5orf52A6NGY3 159 aa9.73□□□□□ -0.85
SNRPA1-202ENST00000394082 IGLV6-57P01721 117 aa9.73□□□□□ -0.85
SNRPA1-202ENST00000394082 JOSD1Q15040 202 aaPredicted RBP9.73□□□□□ -0.85
SNRPA1-202ENST00000394082 MIEN1Q9BRT3 115 aa9.72□□□□□ -0.85
SNRPA1-202ENST00000394082 S100A2P29034 98 aa9.71□□□□□ -0.86
SNRPA1-202ENST00000394082 LCE2DQ5TA82 110 aaPredicted RBP9.71□□□□□ -0.86
SNRPA1-202ENST00000394082 S100A6P06703 90 aa9.7□□□□□ -0.86
SNRPA1-202ENST00000394082 AKR1D1P51857 326 aa9.69□□□□□ -0.86
SNRPA1-202ENST00000394082 S100A7L2Q5SY68 101 aa9.69□□□□□ -0.86
SNRPA1-202ENST00000394082 TRAV23DV6A0A075B6W5 121 aa9.68□□□□□ -0.86
SNRPA1-202ENST00000394082 A0A0J9YXY3 114 aa9.67□□□□□ -0.86
SNRPA1-202ENST00000394082 CBY1Q9Y3M2 126 aa9.67□□□□□ -0.86
SNRPA1-202ENST00000394082 ZNF73O43830 326 aaPredicted RBP9.66□□□□□ -0.86
SNRPA1-202ENST00000394082 HIST3H2BBQ8N257 126 aa9.66□□□□□ -0.86
SNRPA1-202ENST00000394082 ZNF815PA8K554 130 aa9.65□□□□□ -0.86
SNRPA1-202ENST00000394082 C9orf153Q5TBE3 101 aa9.64□□□□□ -0.87
SNRPA1-202ENST00000394082 HIST1H2BLQ99880 126 aa9.64□□□□□ -0.87
SNRPA1-202ENST00000394082 ATOH7Q8N100 152 aa9.63□□□□□ -0.87
SNRPA1-202ENST00000394082 SPRR1BP22528 89 aa9.62□□□□□ -0.87
SNRPA1-202ENST00000394082 HINT1P49773 126 aaPredicted RBP9.62□□□□□ -0.87
SNRPA1-202ENST00000394082 SOSTDC1Q6X4U4 206 aa9.62□□□□□ -0.87
SNRPA1-202ENST00000394082 NPC2P61916 151 aa9.61□□□□□ -0.87
SNRPA1-202ENST00000394082 SLC25A34Q6PIV7 304 aa9.61□□□□□ -0.87
SNRPA1-202ENST00000394082 TIMM17BO60830 172 aa9.6□□□□□ -0.87
SNRPA1-202ENST00000394082 ADAMTSL4-AS1Q5T5F5 129 aa9.6□□□□□ -0.87
SNRPA1-202ENST00000394082 LCE2CQ5TA81 110 aa9.6□□□□□ -0.87
SNRPA1-202ENST00000394082 ST20-AS1Q8NBB2 130 aa9.6□□□□□ -0.87
SNRPA1-202ENST00000394082 LIMD2Q9BT23 127 aa9.6□□□□□ -0.87
SNRPA1-202ENST00000394082 EIF4EBP3O60516 100 aaPredicted RBP9.59□□□□□ -0.87
SNRPA1-202ENST00000394082 SNRPEP62304 92 aaKnown RBP9.59□□□□□ -0.87
SNRPA1-202ENST00000394082 ANKRD39Q53RE8 183 aa9.59□□□□□ -0.87
SNRPA1-202ENST00000394082 SCGB1D4Q6XE38 83 aa9.59□□□□□ -0.87
SNRPA1-202ENST00000394082 TTTY13Q9BZ97 58 aa9.59□□□□□ -0.87
SNRPA1-202ENST00000394082 HSBP1L1C9JCN9 74 aa9.57□□□□□ -0.88
SNRPA1-202ENST00000394082 LITAFQ99732 161 aa9.57□□□□□ -0.88
SNRPA1-202ENST00000394082 SPANXCQ9NY87 97 aa9.57□□□□□ -0.88
SNRPA1-202ENST00000394082 DHRS4-AS1Q9P1J3 65 aa9.57□□□□□ -0.88
SNRPA1-202ENST00000394082 FSIP2Q5CZC0 6907 aa9.55□□□□□ -0.88
SNRPA1-202ENST00000394082 KRTAP19-2Q3LHN2 52 aa9.55□□□□□ -0.88
SNRPA1-202ENST00000394082 LINC00308Q8TCZ7 52 aa9.55□□□□□ -0.88
SNRPA1-202ENST00000394082 CD164Q04900 197 aa9.53□□□□□ -0.88
SNRPA1-202ENST00000394082 COPS9Q8WXC6 57 aa9.53□□□□□ -0.88
SNRPA1-202ENST00000394082 SPANXDQ9BXN6 97 aa9.53□□□□□ -0.88
SNRPA1-202ENST00000394082 LAMTOR3Q9UHA4 124 aa9.53□□□□□ -0.88
SNRPA1-202ENST00000394082 SCGB1D1O95968 90 aa9.52□□□□□ -0.89
SNRPA1-202ENST00000394082 PCP2Q8IVA1 136 aa9.52□□□□□ -0.89
SNRPA1-202ENST00000394082 CRCT1Q9UGL9 99 aa9.52□□□□□ -0.89
SNRPA1-202ENST00000394082 CFC1BP0CG36 223 aa9.5□□□□□ -0.89
SNRPA1-202ENST00000394082 ELOF1P60002 83 aaKnown RBP9.5□□□□□ -0.89
SNRPA1-202ENST00000394082 PCOTHQ58A44 107 aa9.5□□□□□ -0.89
SNRPA1-202ENST00000394082 OR13C6PQ8NH95 151 aa9.5□□□□□ -0.89
SNRPA1-202ENST00000394082 MT1HP80294 61 aa9.49□□□□□ -0.89
SNRPA1-202ENST00000394082 Q5XG85 94 aa9.49□□□□□ -0.89
SNRPA1-202ENST00000394082 Q6ZVH6 145 aa9.49□□□□□ -0.89
SNRPA1-202ENST00000394082 LINC00518Q8N0U6 118 aa9.49□□□□□ -0.89
SNRPA1-202ENST00000394082 IGLV8-61A0A075B6I0 122 aa9.48□□□□□ -0.89
SNRPA1-202ENST00000394082 IFITM1P13164 125 aa9.48□□□□□ -0.89
SNRPA1-202ENST00000394082 HRCT1Q6UXD1 115 aa9.47□□□□□ -0.89
SNRPA1-202ENST00000394082 PRO1933Q9H354 126 aa9.47□□□□□ -0.89
SNRPA1-202ENST00000394082 TRBV7-6A0A0J9YX20 115 aa9.46□□□□□ -0.9
SNRPA1-202ENST00000394082 COX7BP24311 80 aa9.46□□□□□ -0.9
SNRPA1-202ENST00000394082 TEX49A0A1B0GTD5 131 aa9.45□□□□□ -0.9
SNRPA1-202ENST00000394082 C6orf99Q4VX62 202 aa9.45□□□□□ -0.9
SNRPA1-202ENST00000394082 C9orf92A6NGG3 77 aa9.44□□□□□ -0.9
SNRPA1-202ENST00000394082 TAL2Q16559 108 aa9.44□□□□□ -0.9
SNRPA1-202ENST00000394082 MUSTN1Q8IVN3 82 aa9.43□□□□□ -0.9
SNRPA1-202ENST00000394082 H7C2G1 150 aa9.42□□□□□ -0.9
SNRPA1-202ENST00000394082 Q1RN00 199 aa9.41□□□□□ -0.9
SNRPA1-202ENST00000394082 IGLV5-48A0A075B6I7 105 aa9.4□□□□□ -0.9
SNRPA1-202ENST00000394082 SMIM29Q86T20 159 aa9.4□□□□□ -0.9
SNRPA1-202ENST00000394082 A0A1B0GWB2 263 aa9.39□□□□□ -0.91
SNRPA1-202ENST00000394082 A6NDN8 102 aa9.39□□□□□ -0.91
SNRPA1-202ENST00000394082 DEFB105AQ8NG35 78 aa9.39□□□□□ -0.91
SNRPA1-202ENST00000394082 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
SNRPA1-202ENST00000394082 C1orf195Q5TG92 126 aa9.38□□□□□ -0.91
SNRPA1-202ENST00000394082 COX8AP10176 69 aa9.37□□□□□ -0.91
SNRPA1-202ENST00000394082 TRAV13-2A0A0B4J235 113 aa9.36□□□□□ -0.91
SNRPA1-202ENST00000394082 A4D1N5 150 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms