RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 KRTAP4-16G5E9R7 235 aaPredicted RBP11.35□□□□□ -0.59
PDLIM7-204ENST00000393546 MUSTN1Q8IVN3 82 aa11.35□□□□□ -0.59
PDLIM7-204ENST00000393546 PPDPFQ9H3Y8 114 aa11.35□□□□□ -0.59
PDLIM7-204ENST00000393546 TMA7Q9Y2S6 64 aaKnown RBP11.35□□□□□ -0.59
PDLIM7-204ENST00000393546 TRAV23DV6A0A075B6W5 121 aa11.34□□□□□ -0.59
PDLIM7-204ENST00000393546 RPL13AP40429 203 aaKnown RBP11.34□□□□□ -0.59
PDLIM7-204ENST00000393546 JOSD1Q15040 202 aaPredicted RBP11.34□□□□□ -0.59
PDLIM7-204ENST00000393546 B5MCH6 92 aa11.31□□□□□ -0.6
PDLIM7-204ENST00000393546 COX8AP10176 69 aa11.31□□□□□ -0.6
PDLIM7-204ENST00000393546 CRYGAP11844 174 aa11.31□□□□□ -0.6
PDLIM7-204ENST00000393546 ZNF73O43830 326 aaPredicted RBP11.3□□□□□ -0.6
PDLIM7-204ENST00000393546 SMCR5Q8TEV8 140 aa11.3□□□□□ -0.6
PDLIM7-204ENST00000393546 ANAPC11Q9NYG5 84 aa11.3□□□□□ -0.6
PDLIM7-204ENST00000393546 HINT1P49773 126 aaPredicted RBP11.29□□□□□ -0.6
PDLIM7-204ENST00000393546 VAMP8Q9BV40 100 aa11.29□□□□□ -0.6
PDLIM7-204ENST00000393546 PAM16Q9Y3D7 125 aa11.29□□□□□ -0.6
PDLIM7-204ENST00000393546 DLEU1O43261 78 aa11.28□□□□□ -0.6
PDLIM7-204ENST00000393546 FAM229BQ4G0N7 80 aa11.28□□□□□ -0.6
PDLIM7-204ENST00000393546 SPATA45Q537H7 98 aa11.28□□□□□ -0.6
PDLIM7-204ENST00000393546 Q6ZRX8 168 aa11.27□□□□□ -0.61
PDLIM7-204ENST00000393546 ZNF706Q9Y5V0 76 aaPredicted RBP11.27□□□□□ -0.61
PDLIM7-204ENST00000393546 A0A087X002 238 aa11.26□□□□□ -0.61
PDLIM7-204ENST00000393546 C14orf144Q96I85 54 aa11.26□□□□□ -0.61
PDLIM7-204ENST00000393546 A6NDN8 102 aa11.25□□□□□ -0.61
PDLIM7-204ENST00000393546 SPRR4Q96PI1 79 aa11.25□□□□□ -0.61
PDLIM7-204ENST00000393546 TYMSOSQ8TAI1 123 aa11.24□□□□□ -0.61
PDLIM7-204ENST00000393546 TRAV13-2A0A0B4J235 113 aa11.23□□□□□ -0.61
PDLIM7-204ENST00000393546 HIST1H4GQ99525 98 aa11.23□□□□□ -0.61
PDLIM7-204ENST00000393546 Q9BRP9 147 aa11.23□□□□□ -0.61
PDLIM7-204ENST00000393546 PYY3Q5JQD4 70 aa11.21□□□□□ -0.61
PDLIM7-204ENST00000393546 SLC25A34Q6PIV7 304 aa11.21□□□□□ -0.61
PDLIM7-204ENST00000393546 ERC2-IT1O76042 136 aa11.2□□□□□ -0.62
PDLIM7-204ENST00000393546 KRTAP13-2Q52LG2 175 aa11.2□□□□□ -0.62
PDLIM7-204ENST00000393546 A4D1N5 150 aa11.19□□□□□ -0.62
PDLIM7-204ENST00000393546 C6orf99Q4VX62 202 aa11.19□□□□□ -0.62
PDLIM7-204ENST00000393546 COX7BP24311 80 aa11.18□□□□□ -0.62
PDLIM7-204ENST00000393546 HIGD1BQ9P298 99 aa11.18□□□□□ -0.62
PDLIM7-204ENST00000393546 GAGE2AQ6NT46 116 aa11.17□□□□□ -0.62
PDLIM7-204ENST00000393546 DHRS4-AS1Q9P1J3 65 aa11.17□□□□□ -0.62
PDLIM7-204ENST00000393546 TRBV7-6A0A0J9YX20 115 aa11.16□□□□□ -0.62
PDLIM7-204ENST00000393546 ELOF1P60002 83 aaKnown RBP11.15□□□□□ -0.62
PDLIM7-204ENST00000393546 LINC00483Q53H64 154 aa11.14□□□□□ -0.63
PDLIM7-204ENST00000393546 C3orf22Q8N5N4 141 aa11.14□□□□□ -0.63
PDLIM7-204ENST00000393546 HMCN2Q8NDA2 5059 aa11.14□□□□□ -0.63
PDLIM7-204ENST00000393546 SMIM11BQ8TCY0 68 aa11.13□□□□□ -0.63
PDLIM7-204ENST00000393546 A0A1B0GWB2 263 aa11.12□□□□□ -0.63
PDLIM7-204ENST00000393546 C2orf91Q6ZV80 131 aa11.12□□□□□ -0.63
PDLIM7-204ENST00000393546 TSPAN13O95857 204 aa11.1□□□□□ -0.63
PDLIM7-204ENST00000393546 LINC00304Q8N9R0 145 aa11.1□□□□□ -0.63
PDLIM7-204ENST00000393546 ST20-AS1Q8NBB2 130 aa11.1□□□□□ -0.63
PDLIM7-204ENST00000393546 C12orf57Q99622 126 aa11.1□□□□□ -0.63
PDLIM7-204ENST00000393546 VAMP3Q15836 100 aa11.09□□□□□ -0.63
PDLIM7-204ENST00000393546 TAL2Q16559 108 aa11.09□□□□□ -0.63
PDLIM7-204ENST00000393546 IGLV9-49A0A0B4J1Y8 123 aa11.05□□□□□ -0.64
PDLIM7-204ENST00000393546 CFC1BP0CG36 223 aa11.05□□□□□ -0.64
PDLIM7-204ENST00000393546 CFC1P0CG37 223 aa11.05□□□□□ -0.64
PDLIM7-204ENST00000393546 CEND1Q8N111 149 aa11.05□□□□□ -0.64
PDLIM7-204ENST00000393546 RAB37Q96AX2 223 aa11.05□□□□□ -0.64
PDLIM7-204ENST00000393546 C4orf48Q5BLP8 95 aa11.04□□□□□ -0.64
PDLIM7-204ENST00000393546 NHP2Q9NX24 153 aaKnown RBP11.04□□□□□ -0.64
PDLIM7-204ENST00000393546 SPRR1BP22528 89 aa11.03□□□□□ -0.64
PDLIM7-204ENST00000393546 CTAG1AP78358 180 aa11.03□□□□□ -0.64
PDLIM7-204ENST00000393546 SPAG11AQ6PDA7 123 aa11.03□□□□□ -0.64
PDLIM7-204ENST00000393546 SSBP3-AS1Q7Z2R9 100 aa11.03□□□□□ -0.64
PDLIM7-204ENST00000393546 TMEM238LA0A1B0GVL6 79 aa11.02□□□□□ -0.65
PDLIM7-204ENST00000393546 A6NJY4 79 aa11.02□□□□□ -0.65
PDLIM7-204ENST00000393546 SLC25A20O43772 301 aa11.02□□□□□ -0.65
PDLIM7-204ENST00000393546 MOBPQ13875 183 aa11.02□□□□□ -0.65
PDLIM7-204ENST00000393546 Q8NBF4 154 aa11.02□□□□□ -0.65
PDLIM7-204ENST00000393546 DEFB105AQ8NG35 78 aa11.02□□□□□ -0.65
PDLIM7-204ENST00000393546 UQCR10Q9UDW1 63 aa11.02□□□□□ -0.65
PDLIM7-204ENST00000393546 A0A0B4J2C4 111 aa11.01□□□□□ -0.65
PDLIM7-204ENST00000393546 H7C2G1 150 aa11□□□□□ -0.65
PDLIM7-204ENST00000393546 TEX49A0A1B0GTD5 131 aa10.99□□□□□ -0.65
PDLIM7-204ENST00000393546 HSD52Q0P140 79 aa10.99□□□□□ -0.65
PDLIM7-204ENST00000393546 BVES-AS1Q5T3Y7 98 aa10.99□□□□□ -0.65
PDLIM7-204ENST00000393546 C9orf153Q5TBE3 101 aa10.99□□□□□ -0.65
PDLIM7-204ENST00000393546 LAMTOR3Q9UHA4 124 aa10.99□□□□□ -0.65
PDLIM7-204ENST00000393546 UBR4Q5T4S7 5183 aa10.99□□□□□ -0.65
PDLIM7-204ENST00000393546 LINC00575Q6W349 94 aa10.98□□□□□ -0.65
PDLIM7-204ENST00000393546 FXYD2P54710 66 aa10.97□□□□□ -0.65
PDLIM7-204ENST00000393546 PRR4Q16378 134 aa10.97□□□□□ -0.65
PDLIM7-204ENST00000393546 PRO1854Q9UHT4 67 aa10.96□□□□□ -0.65
PDLIM7-204ENST00000393546 hADV29S1A0JD25 119 aa10.95□□□□□ -0.66
PDLIM7-204ENST00000393546 IGLV5-48A0A075B6I7 105 aa10.94□□□□□ -0.66
PDLIM7-204ENST00000393546 SPINK1P00995 79 aa10.94□□□□□ -0.66
PDLIM7-204ENST00000393546 LINC01547P58512 204 aaPredicted RBP10.93□□□□□ -0.66
PDLIM7-204ENST00000393546 Q1RN00 199 aa10.93□□□□□ -0.66
PDLIM7-204ENST00000393546 SMIM6P0DI80 62 aa10.92□□□□□ -0.66
PDLIM7-204ENST00000393546 H0YGX0 51 aa10.91□□□□□ -0.66
PDLIM7-204ENST00000393546 SMIM29Q86T20 159 aa10.9□□□□□ -0.66
PDLIM7-204ENST00000393546 Q8N377 158 aa10.9□□□□□ -0.66
PDLIM7-204ENST00000393546 PRO1933Q9H354 126 aa10.9□□□□□ -0.66
PDLIM7-204ENST00000393546 SNCGO76070 127 aa10.89□□□□□ -0.67
PDLIM7-204ENST00000393546 Q6ZQY7 126 aa10.89□□□□□ -0.67
PDLIM7-204ENST00000393546 RETNLBQ9BQ08 111 aa10.89□□□□□ -0.67
PDLIM7-204ENST00000393546 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.87□□□□□ -0.67
PDLIM7-204ENST00000393546 RPS29P62273 56 aaKnown RBP10.86□□□□□ -0.67
PDLIM7-204ENST00000393546 LRP2P98164 4655 aa10.86□□□□□ -0.67
PDLIM7-204ENST00000393546 LOC105371267A0A1B0GV96 52 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms