RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 COX14Q96I36 57 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 SMAD5-AS1Q9Y6J3 95 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 A0A087WVE0 104 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 A0A1B0GU33 70 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 IGLV1-51P01701 117 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 Q5W150 140 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 LINC00308Q8TCZ7 52 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 RPL39LQ96EH5 51 aaKnown RBP2.22□□□□□ -2.05
XRN1-202ENST00000392981 NF1P21359 2839 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 H3BRN7 92 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 PCDH15Q96QU1 1955 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 CNOT1A5YKK6 2376 aaKnown RBP2.22□□□□□ -2.05
XRN1-202ENST00000392981 H0Y9P7 68 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 RTL8CO15255 209 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 HRES1P13985 223 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 NDUFA4L2Q9NRX3 87 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 RPL39P62891 51 aaKnown RBP2.21□□□□□ -2.06
XRN1-202ENST00000392981 Q8NDZ9 215 aa2.21□□□□□ -2.06
XRN1-202ENST00000392981 ZANQ9Y493 2812 aa2.21□□□□□ -2.06
XRN1-202ENST00000392981 IGKV1-17P01599 117 aa2.21□□□□□ -2.06
XRN1-202ENST00000392981 CSAG1Q6PB30 78 aa2.21□□□□□ -2.06
XRN1-202ENST00000392981 DOPEY1Q5JWR5 2465 aa2.21□□□□□ -2.06
XRN1-202ENST00000392981 NCOA6Q14686 2063 aaPredicted RBP2.21□□□□□ -2.06
XRN1-202ENST00000392981 UBR5O95071 2799 aaPredicted RBP2.21□□□□□ -2.06
XRN1-202ENST00000392981 IGLV3-19P01714 112 aa2.21□□□□□ -2.06
XRN1-202ENST00000392981 SPTAN1Q13813 2472 aaKnown RBP2.21□□□□□ -2.06
XRN1-202ENST00000392981 FLNCQ14315 2725 aa2.21□□□□□ -2.06
XRN1-202ENST00000392981 KRTAP7-1Q8IUC3 87 aa2.21□□□□□ -2.06
XRN1-202ENST00000392981 NBASA2RRP1 2371 aa2.21□□□□□ -2.06
XRN1-202ENST00000392981 DNAH9Q9NYC9 4486 aa2.21□□□□□ -2.06
XRN1-202ENST00000392981 LINC01546A6NGU7 62 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.2□□□□□ -2.06
XRN1-202ENST00000392981 LYNX1G3V0Z9 82 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 LYNX1P0DP58 116 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 TTC28Q96AY4 2481 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 GVINP1Q7Z2Y8 2422 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 DOCK11Q5JSL3 2073 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 ASB16-AS1Q495Z4 193 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 TRPM6Q9BX84 2022 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 TEX15Q9BXT5 2789 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 CACNA1HO95180 2353 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 TRBV6-5A0A0K0K1A5 114 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 A6NN06 94 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 XP32Q5T750 250 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 PIEZO2Q9H5I5 2752 aa2.2□□□□□ -2.06
XRN1-202ENST00000392981 PANO1I0J062 215 aa2.19□□□□□ -2.06
XRN1-202ENST00000392981 KRTAP10-2P60368 255 aa2.19□□□□□ -2.06
XRN1-202ENST00000392981 CYP4F30PQ9H0H9 118 aa2.19□□□□□ -2.06
XRN1-202ENST00000392981 COX17Q14061 63 aa2.19□□□□□ -2.06
XRN1-202ENST00000392981 LINC00322Q6ZN03 302 aaPredicted RBP2.19□□□□□ -2.06
XRN1-202ENST00000392981 FREM3P0C091 2139 aa2.19□□□□□ -2.06
XRN1-202ENST00000392981 IGLV3-32A0A0A0MS00 114 aa2.19□□□□□ -2.06
XRN1-202ENST00000392981 ODF3BA8MYP8 253 aa2.19□□□□□ -2.06
XRN1-202ENST00000392981 C1orf137Q5JT78 98 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 THADAQ6YHU6 1953 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 A0A1W2PNM2 257 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 MAPK1IP1LQ8NDC0 245 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 BPESC1Q9GZL8 116 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 PKD1L1Q8TDX9 2849 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 G3V318 75 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 UQCR11O14957 56 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 A0A0G2JQZ4 141 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 ACACAQ13085 2346 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 DEFB123Q8N688 67 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 PRO0255Q9UI72 69 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 TRBV6-1A0A0K0K1D8 114 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 H3BUA1 57 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 EIF4EBP1Q13541 118 aaPredicted RBP2.18□□□□□ -2.06
XRN1-202ENST00000392981 DMAC1Q96GE9 116 aa2.18□□□□□ -2.06
XRN1-202ENST00000392981 FAM208BQ5VWN6 2430 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 CDKN2A-AS1Q9UH64 79 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 COL5A1P20908 1838 aaPredicted RBP2.17□□□□□ -2.06
XRN1-202ENST00000392981 VWFP04275 2813 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 SORL1Q92673 2214 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 TET1Q8NFU7 2136 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 F8P00451 2351 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 C9orf106Q8NAJ2 232 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 ZNF462Q96JM2 2506 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 FREM1Q5H8C1 2179 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 ARHGAP32A7KAX9 2087 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 EML6Q6ZMW3 1958 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 PRRC2AP48634 2157 aaKnown RBP2.17□□□□□ -2.06
XRN1-202ENST00000392981 WT1-ASQ06250 92 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 SMIM11BQ8TCY0 68 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 C6orf48Q9UBA6 75 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 MUC4Q99102 2169 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 MED13Q9UHV7 2174 aa2.17□□□□□ -2.06
XRN1-202ENST00000392981 MED13LQ71F56 2210 aa2.16□□□□□ -2.06
XRN1-202ENST00000392981 TP53AIP1Q9HCN2 124 aa2.16□□□□□ -2.06
XRN1-202ENST00000392981 MYOFQ9NZM1 2061 aa2.16□□□□□ -2.06
XRN1-202ENST00000392981 HECTD4Q9Y4D8 3996 aa2.16□□□□□ -2.06
XRN1-202ENST00000392981 LINC00575Q6W349 94 aa2.16□□□□□ -2.06
XRN1-202ENST00000392981 ZNF833PQ6ZTB9 187 aa2.16□□□□□ -2.06
XRN1-202ENST00000392981 COA5Q86WW8 74 aa2.16□□□□□ -2.06
XRN1-202ENST00000392981 PCNX1Q96RV3 2341 aa2.16□□□□□ -2.06
XRN1-202ENST00000392981 TRAV22A0A0B4J277 110 aa2.15□□□□□ -2.06
XRN1-202ENST00000392981 ELOF1P60002 83 aaKnown RBP2.15□□□□□ -2.06
XRN1-202ENST00000392981 LOC101927531A0A1B0GV80 90 aa2.15□□□□□ -2.07
XRN1-202ENST00000392981 DYNC2H1Q8NCM8 4307 aaKnown RBP2.15□□□□□ -2.07
XRN1-202ENST00000392981 TANC2Q9HCD6 1990 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms