RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 SPATA3Q8NHX4 192 aa8.84□□□□□ -0.99
PTPRN2-203ENST00000389418 HIVEP1P15822 2718 aa8.84□□□□□ -0.99
PTPRN2-203ENST00000389418 FAM30AQ9NZY2 134 aa8.84□□□□□ -0.99
PTPRN2-203ENST00000389418 LINC00588Q9Y4M8 146 aa8.84□□□□□ -0.99
PTPRN2-203ENST00000389418 Q6ZVQ6 151 aa8.83□□□□□ -1
PTPRN2-203ENST00000389418 LINC00846Q9NV44 126 aa8.83□□□□□ -1
PTPRN2-203ENST00000389418 RETNLBQ9BQ08 111 aa8.83□□□□□ -1
PTPRN2-203ENST00000389418 CHTF8P0CG12 524 aa8.83□□□□□ -1
PTPRN2-203ENST00000389418 LINC01547P58512 204 aaPredicted RBP8.83□□□□□ -1
PTPRN2-203ENST00000389418 A0A0U1RQV1 116 aa8.83□□□□□ -1
PTPRN2-203ENST00000389418 CSNK1G2-AS1Q8NCQ2 148 aa8.83□□□□□ -1
PTPRN2-203ENST00000389418 LINC00208Q96KT6 92 aa8.83□□□□□ -1
PTPRN2-203ENST00000389418 CXCL6P80162 114 aa8.82□□□□□ -1
PTPRN2-203ENST00000389418 DMBT1Q9UGM3 2413 aaPredicted RBP8.82□□□□□ -1
PTPRN2-203ENST00000389418 C16orf90A8MZG2 172 aa8.82□□□□□ -1
PTPRN2-203ENST00000389418 SMCPP49901 116 aaPredicted RBP8.82□□□□□ -1
PTPRN2-203ENST00000389418 LOC400499M0QZD8 3231 aa8.82□□□□□ -1
PTPRN2-203ENST00000389418 ZANQ9Y493 2812 aa8.81□□□□□ -1
PTPRN2-203ENST00000389418 SVIPQ8NHG7 77 aa8.81□□□□□ -1
PTPRN2-203ENST00000389418 KRTAP1-1Q07627 177 aa8.8□□□□□ -1
PTPRN2-203ENST00000389418 ELOF1P60002 83 aaKnown RBP8.8□□□□□ -1
PTPRN2-203ENST00000389418 C19orf73Q9NVV2 129 aa8.8□□□□□ -1
PTPRN2-203ENST00000389418 KMT2BQ9UMN6 2715 aaPredicted RBP8.8□□□□□ -1
PTPRN2-203ENST00000389418 TENM4Q6N022 2769 aa8.8□□□□□ -1
PTPRN2-203ENST00000389418 KIAA0087Q14695 138 aa8.79□□□□□ -1
PTPRN2-203ENST00000389418 FAM218AQ96MZ4 157 aa8.78□□□□□ -1
PTPRN2-203ENST00000389418 HCG22E2RYF7 251 aa8.78□□□□□ -1
PTPRN2-203ENST00000389418 SPTBN5Q9NRC6 3674 aaKnown RBP8.77□□□□□ -1
PTPRN2-203ENST00000389418 RTL8CO15255 209 aa8.77□□□□□ -1.01
PTPRN2-203ENST00000389418 Q6ZRP5 223 aa8.77□□□□□ -1.01
PTPRN2-203ENST00000389418 Q6ZRX8 168 aa8.77□□□□□ -1.01
PTPRN2-203ENST00000389418 PRO0461Q9UI25 63 aa8.77□□□□□ -1.01
PTPRN2-203ENST00000389418 SMIM26A0A096LP01 95 aa8.77□□□□□ -1.01
PTPRN2-203ENST00000389418 PHF5AQ7RTV0 110 aaKnown RBP8.75□□□□□ -1.01
PTPRN2-203ENST00000389418 FAM229AH3BQW9 127 aa8.75□□□□□ -1.01
PTPRN2-203ENST00000389418 GIG44P09565 113 aaPredicted RBP8.74□□□□□ -1.01
PTPRN2-203ENST00000389418 LINC00612Q8N6U2 182 aa8.74□□□□□ -1.01
PTPRN2-203ENST00000389418 CRYGAP11844 174 aa8.74□□□□□ -1.01
PTPRN2-203ENST00000389418 BCE1O60756 84 aa8.73□□□□□ -1.01
PTPRN2-203ENST00000389418 LITAFQ99732 161 aa8.73□□□□□ -1.01
PTPRN2-203ENST00000389418 TRBV7-7A0A0K0K1E9 115 aa8.73□□□□□ -1.01
PTPRN2-203ENST00000389418 hDV103S1A0JD37 113 aa8.73□□□□□ -1.01
PTPRN2-203ENST00000389418 TP53AIP1Q9HCN2 124 aa8.72□□□□□ -1.01
PTPRN2-203ENST00000389418 H0Y9P7 68 aa8.72□□□□□ -1.01
PTPRN2-203ENST00000389418 Q8NBF4 154 aa8.72□□□□□ -1.01
PTPRN2-203ENST00000389418 PRR34Q9NV39 138 aa8.71□□□□□ -1.01
PTPRN2-203ENST00000389418 MOBPQ13875 183 aa8.71□□□□□ -1.02
PTPRN2-203ENST00000389418 NIPBLQ6KC79 2804 aaeCLIP8.7□□□□□ -1.02
PTPRN2-203ENST00000389418 LOC110117498A0A087WWA1 95 aa8.7□□□□□ -1.02
PTPRN2-203ENST00000389418 C1orf195Q5TG92 126 aa8.7□□□□□ -1.02
PTPRN2-203ENST00000389418 TMEM254Q8TBM7 123 aa8.7□□□□□ -1.02
PTPRN2-203ENST00000389418 A6NED7 52 aa8.7□□□□□ -1.02
PTPRN2-203ENST00000389418 EIF4EBP3O60516 100 aaPredicted RBP8.69□□□□□ -1.02
PTPRN2-203ENST00000389418 FAM168BA1KXE4 195 aa8.69□□□□□ -1.02
PTPRN2-203ENST00000389418 EPM2AB3EWF7 344 aa8.69□□□□□ -1.02
PTPRN2-203ENST00000389418 VPREB1P12018 145 aa8.69□□□□□ -1.02
PTPRN2-203ENST00000389418 SPACA4Q8TDM5 124 aa8.68□□□□□ -1.02
PTPRN2-203ENST00000389418 DCHS2Q6V1P9 2916 aa8.68□□□□□ -1.02
PTPRN2-203ENST00000389418 IGLV6-57P01721 117 aa8.68□□□□□ -1.02
PTPRN2-203ENST00000389418 TM2D3Q9BRN9 247 aa8.67□□□□□ -1.02
PTPRN2-203ENST00000389418 USP34Q70CQ2 3546 aa8.67□□□□□ -1.02
PTPRN2-203ENST00000389418 LINC00476Q8WZB0 136 aa8.66□□□□□ -1.02
PTPRN2-203ENST00000389418 Q6ZQT0 140 aa8.65□□□□□ -1.02
PTPRN2-203ENST00000389418 ST20-AS1Q8NBB2 130 aa8.65□□□□□ -1.02
PTPRN2-203ENST00000389418 FLG2Q5D862 2391 aaPredicted RBP8.65□□□□□ -1.02
PTPRN2-203ENST00000389418 NF1P21359 2839 aa8.65□□□□□ -1.03
PTPRN2-203ENST00000389418 DCHS1Q96JQ0 3298 aa8.64□□□□□ -1.03
PTPRN2-203ENST00000389418 KCNQ1DNQ9H478 68 aa8.63□□□□□ -1.03
PTPRN2-203ENST00000389418 SMR3BP02814 79 aaPredicted RBP8.63□□□□□ -1.03
PTPRN2-203ENST00000389418 PCOTHQ58A44 107 aa8.63□□□□□ -1.03
PTPRN2-203ENST00000389418 C1orf64Q8NEQ6 169 aa8.63□□□□□ -1.03
PTPRN2-203ENST00000389418 PLA2G1BP04054 148 aaKnown RBP8.63□□□□□ -1.03
PTPRN2-203ENST00000389418 TYMSOSQ8TAI1 123 aa8.63□□□□□ -1.03
PTPRN2-203ENST00000389418 TRBV7-4A0A0J9YYF1 115 aa8.63□□□□□ -1.03
PTPRN2-203ENST00000389418 H3BPC8 53 aa8.63□□□□□ -1.03
PTPRN2-203ENST00000389418 CR1P17927 2039 aa8.61□□□□□ -1.03
PTPRN2-203ENST00000389418 IGLV1-50A0A075B6I6 118 aa8.61□□□□□ -1.03
PTPRN2-203ENST00000389418 APCP25054 2843 aa8.6□□□□□ -1.03
PTPRN2-203ENST00000389418 SPINK1P00995 79 aa8.6□□□□□ -1.03
PTPRN2-203ENST00000389418 CASC10Q5T4H9 136 aa8.6□□□□□ -1.03
PTPRN2-203ENST00000389418 TLX1NBP0CAT3 122 aa8.6□□□□□ -1.03
PTPRN2-203ENST00000389418 SMIM29Q86T20 159 aa8.58□□□□□ -1.04
PTPRN2-203ENST00000389418 PLA2G2DQ9UNK4 145 aa8.58□□□□□ -1.04
PTPRN2-203ENST00000389418 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
PTPRN2-203ENST00000389418 C9orf163Q8N9P6 203 aa8.57□□□□□ -1.04
PTPRN2-203ENST00000389418 RPS28P62857 69 aaKnown RBP8.57□□□□□ -1.04
PTPRN2-203ENST00000389418 ZNF575Q86XF7 245 aa8.57□□□□□ -1.04
PTPRN2-203ENST00000389418 LINC00528Q8N1L1 170 aa8.57□□□□□ -1.04
PTPRN2-203ENST00000389418 C15orf56Q8N910 161 aa8.57□□□□□ -1.04
PTPRN2-203ENST00000389418 IGKV2D-30A0A075B6S6 120 aa8.56□□□□□ -1.04
PTPRN2-203ENST00000389418 IGKV2-30P06310 120 aa8.56□□□□□ -1.04
PTPRN2-203ENST00000389418 C8orf87E5RJ46 101 aa8.56□□□□□ -1.04
PTPRN2-203ENST00000389418 LINC00313P59037 77 aa8.56□□□□□ -1.04
PTPRN2-203ENST00000389418 RPL37AP61513 92 aaKnown RBP8.55□□□□□ -1.04
PTPRN2-203ENST00000389418 A0A087WTM6 91 aa8.55□□□□□ -1.04
PTPRN2-203ENST00000389418 A0A0G2JQZ4 141 aa8.54□□□□□ -1.04
PTPRN2-203ENST00000389418 A0A1W2PNN7 141 aa8.54□□□□□ -1.04
PTPRN2-203ENST00000389418 SSBP3-AS1Q7Z2R9 100 aa8.54□□□□□ -1.04
PTPRN2-203ENST00000389418 FBN2P35556 2912 aa8.54□□□□□ -1.04
PTPRN2-203ENST00000389418 LINC00336Q6ZUF6 198 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms