RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 KCNQ1DNQ9H478 68 aa16.91■□□□□ 0.3
MSX1-201ENST00000382723 A0A087WYN8 130 aa16.9■□□□□ 0.3
MSX1-201ENST00000382723 H0YGX0 51 aa16.9■□□□□ 0.3
MSX1-201ENST00000382723 PKD1P98161 4303 aa16.89■□□□□ 0.29
MSX1-201ENST00000382723 LST1O00453 97 aa16.89■□□□□ 0.29
MSX1-201ENST00000382723 PRO0461Q9UI25 63 aa16.88■□□□□ 0.29
MSX1-201ENST00000382723 MTURNQ8N3F0 131 aa16.87■□□□□ 0.29
MSX1-201ENST00000382723 F8W1H4 67 aa16.86■□□□□ 0.29
MSX1-201ENST00000382723 DNAH5Q8TE73 4624 aa16.85■□□□□ 0.29
MSX1-201ENST00000382723 PRYO14603 147 aa16.85■□□□□ 0.29
MSX1-201ENST00000382723 UBE2BP63146 152 aa16.85■□□□□ 0.29
MSX1-201ENST00000382723 KRTAP10-1P60331 282 aa16.84■□□□□ 0.29
MSX1-201ENST00000382723 COX7BP24311 80 aa16.83■□□□□ 0.28
MSX1-201ENST00000382723 PCP4P48539 62 aa16.82■□□□□ 0.28
MSX1-201ENST00000382723 FAM30AQ9NZY2 134 aa16.82■□□□□ 0.28
MSX1-201ENST00000382723 PLAC8Q9NZF1 115 aa16.81■□□□□ 0.28
MSX1-201ENST00000382723 EPM2AB3EWF7 344 aa16.8■□□□□ 0.28
MSX1-201ENST00000382723 K7ERU9 68 aa16.8■□□□□ 0.28
MSX1-201ENST00000382723 KRTAP11-1Q8IUC1 163 aa16.8■□□□□ 0.28
MSX1-201ENST00000382723 C9JAW5 83 aa16.8■□□□□ 0.28
MSX1-201ENST00000382723 ELOF1P60002 83 aaKnown RBP16.8■□□□□ 0.28
MSX1-201ENST00000382723 REG3GQ6UW15 175 aa16.8■□□□□ 0.28
MSX1-201ENST00000382723 TRBV7-6A0A0J9YX20 115 aa16.79■□□□□ 0.28
MSX1-201ENST00000382723 A0A1B0GVY2 172 aa16.78■□□□□ 0.28
MSX1-201ENST00000382723 TRACP01848 142 aa16.78■□□□□ 0.28
MSX1-201ENST00000382723 LINC00575Q6W349 94 aa16.78■□□□□ 0.28
MSX1-201ENST00000382723 SPRR1AP35321 89 aa16.77■□□□□ 0.28
MSX1-201ENST00000382723 ETDCA0A1B0GVM5 59 aa16.76■□□□□ 0.27
MSX1-201ENST00000382723 KRTAP4-16G5E9R7 235 aaPredicted RBP16.75■□□□□ 0.27
MSX1-201ENST00000382723 SMCPP49901 116 aaPredicted RBP16.75■□□□□ 0.27
MSX1-201ENST00000382723 DNAL4O96015 105 aa16.74■□□□□ 0.27
MSX1-201ENST00000382723 LINC00528Q8N1L1 170 aa16.73■□□□□ 0.27
MSX1-201ENST00000382723 B5MCH6 92 aa16.72■□□□□ 0.27
MSX1-201ENST00000382723 ETDBQ3ZM63 59 aa16.72■□□□□ 0.27
MSX1-201ENST00000382723 Q6ZSA8 131 aa16.72■□□□□ 0.27
MSX1-201ENST00000382723 hADV29S1A0JD25 119 aa16.72■□□□□ 0.27
MSX1-201ENST00000382723 SLC25A20O43772 301 aa16.71■□□□□ 0.27
MSX1-201ENST00000382723 SNCGO76070 127 aa16.71■□□□□ 0.27
MSX1-201ENST00000382723 HAMPP81172 84 aa16.71■□□□□ 0.27
MSX1-201ENST00000382723 CIRBP-AS1Q8TBR5 109 aa16.71■□□□□ 0.27
MSX1-201ENST00000382723 A0A1B0GX51 115 aa16.7■□□□□ 0.26
MSX1-201ENST00000382723 Q6ZRX8 168 aa16.7■□□□□ 0.26
MSX1-201ENST00000382723 SCXQ7RTU7 201 aa16.68■□□□□ 0.26
MSX1-201ENST00000382723 FAM19A1Q7Z5A9 133 aa16.68■□□□□ 0.26
MSX1-201ENST00000382723 RYR3Q15413 4870 aa16.66■□□□□ 0.26
MSX1-201ENST00000382723 PRLHP81277 87 aa16.64■□□□□ 0.26
MSX1-201ENST00000382723 Q9BRP9 147 aa16.64■□□□□ 0.26
MSX1-201ENST00000382723 DNAH8Q96JB1 4490 aa16.64■□□□□ 0.26
MSX1-201ENST00000382723 PKHD1P08F94 4074 aa16.64■□□□□ 0.25
MSX1-201ENST00000382723 BAALC-AS2P0C853 105 aa16.64■□□□□ 0.25
MSX1-201ENST00000382723 C21orf62-AS1Q17RA5 79 aa16.64■□□□□ 0.25
MSX1-201ENST00000382723 ANKRD29Q8N6D5 301 aa16.64■□□□□ 0.25
MSX1-201ENST00000382723 VPS25Q9BRG1 176 aa16.64■□□□□ 0.25
MSX1-201ENST00000382723 Q6ZQY7 126 aa16.62■□□□□ 0.25
MSX1-201ENST00000382723 INAFM2P0DMQ5 153 aa16.61■□□□□ 0.25
MSX1-201ENST00000382723 ORMDL1Q9P0S3 153 aa16.61■□□□□ 0.25
MSX1-201ENST00000382723 DHRS4-AS1Q9P1J3 65 aa16.61■□□□□ 0.25
MSX1-201ENST00000382723 H3BT86 120 aa16.6■□□□□ 0.25
MSX1-201ENST00000382723 PSORS1C2Q9UIG4 136 aa16.6■□□□□ 0.25
MSX1-201ENST00000382723 BCE1O60756 84 aa16.59■□□□□ 0.25
MSX1-201ENST00000382723 UBE2AP49459 152 aa16.58■□□□□ 0.24
MSX1-201ENST00000382723 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.56■□□□□ 0.24
MSX1-201ENST00000382723 SMCR5Q8TEV8 140 aa16.56■□□□□ 0.24
MSX1-201ENST00000382723 TEN1Q86WV5 123 aa16.55■□□□□ 0.24
MSX1-201ENST00000382723 HIGD2AQ9BW72 106 aa16.55■□□□□ 0.24
MSX1-201ENST00000382723 ERC2-IT1O76042 136 aa16.55■□□□□ 0.24
MSX1-201ENST00000382723 C1orf137Q5JT78 98 aa16.54■□□□□ 0.24
MSX1-201ENST00000382723 J3QR89 54 aa16.52■□□□□ 0.23
MSX1-201ENST00000382723 LINC01600Q96MT4 127 aa16.52■□□□□ 0.23
MSX1-201ENST00000382723 LRP1BQ9NZR2 4599 aa16.51■□□□□ 0.23
MSX1-201ENST00000382723 H0Y9J4 135 aa16.51■□□□□ 0.23
MSX1-201ENST00000382723 DEFB105AQ8NG35 78 aa16.5■□□□□ 0.23
MSX1-201ENST00000382723 TMEM256-PLSCR3K7ERE1 68 aa16.49■□□□□ 0.23
MSX1-201ENST00000382723 ST20-AS1Q8NBB2 130 aa16.49■□□□□ 0.23
MSX1-201ENST00000382723 DYNC1H1Q14204 4646 aaKnown RBP16.48■□□□□ 0.23
MSX1-201ENST00000382723 KRTAP13-1Q8IUC0 172 aa16.48■□□□□ 0.23
MSX1-201ENST00000382723 PPDPFLQ8WWR9 84 aa16.48■□□□□ 0.23
MSX1-201ENST00000382723 TEX49A0A1B0GTD5 131 aa16.44■□□□□ 0.22
MSX1-201ENST00000382723 A0A1B0GV72 72 aa16.44■□□□□ 0.22
MSX1-201ENST00000382723 XGP55808 180 aa16.43■□□□□ 0.22
MSX1-201ENST00000382723 GHRHP01286 108 aa16.42■□□□□ 0.22
MSX1-201ENST00000382723 LINC01547P58512 204 aaPredicted RBP16.41■□□□□ 0.22
MSX1-201ENST00000382723 H3BQ85 93 aa16.4■□□□□ 0.22
MSX1-201ENST00000382723 Q8N377 158 aa16.4■□□□□ 0.22
MSX1-201ENST00000382723 LAMTOR3Q9UHA4 124 aa16.39■□□□□ 0.21
MSX1-201ENST00000382723 IGLV7-43P04211 117 aa16.39■□□□□ 0.21
MSX1-201ENST00000382723 ZNF861PO60384 105 aa16.37■□□□□ 0.21
MSX1-201ENST00000382723 IGLV5-48A0A075B6I7 105 aa16.37■□□□□ 0.21
MSX1-201ENST00000382723 SMR3BP02814 79 aaPredicted RBP16.33■□□□□ 0.21
MSX1-201ENST00000382723 C3orf22Q8N5N4 141 aa16.33■□□□□ 0.21
MSX1-201ENST00000382723 SRRM2Q9UQ35 2752 aaKnown RBP16.33■□□□□ 0.2
MSX1-201ENST00000382723 NDUFV3P56181 108 aaKnown RBP16.33■□□□□ 0.2
MSX1-201ENST00000382723 GAGE2AQ6NT46 116 aa16.31■□□□□ 0.2
MSX1-201ENST00000382723 OBSCN-AS1Q96MR7 158 aa16.3■□□□□ 0.2
MSX1-201ENST00000382723 CDIP1Q9H305 208 aa16.3■□□□□ 0.2
MSX1-201ENST00000382723 C14orf132Q9NPU4 83 aa16.29■□□□□ 0.2
MSX1-201ENST00000382723 JMJD7-PLA2G4BH0Y9G9 81 aa16.29■□□□□ 0.2
MSX1-201ENST00000382723 APOBP04114 4563 aaKnown RBP16.27■□□□□ 0.2
MSX1-201ENST00000382723 RPL37AP61513 92 aaKnown RBP16.25■□□□□ 0.19
MSX1-201ENST00000382723 RBM3P98179 157 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms