RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 KRTAP4-16G5E9R7 235 aaPredicted RBP9.41□□□□□ -0.9
PDGFB-202ENST00000381551 FAM19A1Q7Z5A9 133 aa9.41□□□□□ -0.9
PDGFB-202ENST00000381551 KRTAP13-1Q8IUC0 172 aa9.41□□□□□ -0.9
PDGFB-202ENST00000381551 CBY1Q9Y3M2 126 aa9.4□□□□□ -0.9
PDGFB-202ENST00000381551 ZNF73O43830 326 aaPredicted RBP9.39□□□□□ -0.91
PDGFB-202ENST00000381551 RPL28P46779 137 aaKnown RBP9.39□□□□□ -0.91
PDGFB-202ENST00000381551 UBE2AP49459 152 aa9.39□□□□□ -0.91
PDGFB-202ENST00000381551 HSD52Q0P140 79 aa9.39□□□□□ -0.91
PDGFB-202ENST00000381551 H0Y9J4 135 aa9.38□□□□□ -0.91
PDGFB-202ENST00000381551 PRLHP81277 87 aa9.38□□□□□ -0.91
PDGFB-202ENST00000381551 DIRC1Q969H9 104 aa9.38□□□□□ -0.91
PDGFB-202ENST00000381551 ETDCA0A1B0GVM5 59 aa9.37□□□□□ -0.91
PDGFB-202ENST00000381551 B5MCH6 92 aa9.37□□□□□ -0.91
PDGFB-202ENST00000381551 CFC1BP0CG36 223 aa9.37□□□□□ -0.91
PDGFB-202ENST00000381551 CFC1P0CG37 223 aa9.37□□□□□ -0.91
PDGFB-202ENST00000381551 FAT3Q8TDW7 4589 aa9.36□□□□□ -0.91
PDGFB-202ENST00000381551 FXYD2P54710 66 aa9.36□□□□□ -0.91
PDGFB-202ENST00000381551 LRP1Q07954 4544 aaKnown RBP9.35□□□□□ -0.91
PDGFB-202ENST00000381551 FLG2Q5D862 2391 aaPredicted RBP9.35□□□□□ -0.91
PDGFB-202ENST00000381551 MYCBP2O75592 4640 aa9.35□□□□□ -0.91
PDGFB-202ENST00000381551 TMEM238LA0A1B0GVL6 79 aa9.34□□□□□ -0.91
PDGFB-202ENST00000381551 A6NJY4 79 aa9.34□□□□□ -0.91
PDGFB-202ENST00000381551 TSTD3H0UI37 97 aa9.34□□□□□ -0.91
PDGFB-202ENST00000381551 A0A0B4J2C4 111 aa9.33□□□□□ -0.92
PDGFB-202ENST00000381551 HINT1P49773 126 aaPredicted RBP9.33□□□□□ -0.92
PDGFB-202ENST00000381551 C6orf99Q4VX62 202 aa9.33□□□□□ -0.92
PDGFB-202ENST00000381551 Q6ZRX8 168 aa9.33□□□□□ -0.92
PDGFB-202ENST00000381551 SMIM11BQ8TCY0 68 aa9.33□□□□□ -0.92
PDGFB-202ENST00000381551 CTAG1AP78358 180 aa9.32□□□□□ -0.92
PDGFB-202ENST00000381551 RAB37Q96AX2 223 aa9.32□□□□□ -0.92
PDGFB-202ENST00000381551 HIGD2AQ9BW72 106 aa9.32□□□□□ -0.92
PDGFB-202ENST00000381551 TRBV7-6A0A0J9YX20 115 aa9.31□□□□□ -0.92
PDGFB-202ENST00000381551 RPL13AP40429 203 aaKnown RBP9.31□□□□□ -0.92
PDGFB-202ENST00000381551 SMCR5Q8TEV8 140 aa9.31□□□□□ -0.92
PDGFB-202ENST00000381551 Q9BRP9 147 aa9.31□□□□□ -0.92
PDGFB-202ENST00000381551 BVES-AS1Q5T3Y7 98 aa9.3□□□□□ -0.92
PDGFB-202ENST00000381551 COX7BP24311 80 aa9.29□□□□□ -0.92
PDGFB-202ENST00000381551 PRO1854Q9UHT4 67 aa9.29□□□□□ -0.92
PDGFB-202ENST00000381551 KRTAP1-4P0C5Y4 121 aa9.28□□□□□ -0.92
PDGFB-202ENST00000381551 ELOF1P60002 83 aaKnown RBP9.28□□□□□ -0.92
PDGFB-202ENST00000381551 NHP2Q9NX24 153 aaKnown RBP9.28□□□□□ -0.92
PDGFB-202ENST00000381551 A0A1B0GWB2 263 aa9.27□□□□□ -0.93
PDGFB-202ENST00000381551 H7C2G1 150 aa9.27□□□□□ -0.93
PDGFB-202ENST00000381551 ERC2-IT1O76042 136 aa9.27□□□□□ -0.93
PDGFB-202ENST00000381551 OXTP01178 125 aa9.27□□□□□ -0.93
PDGFB-202ENST00000381551 LINC01600Q96MT4 127 aa9.27□□□□□ -0.93
PDGFB-202ENST00000381551 KRTAP29-1A8MX34 341 aaPredicted RBP9.26□□□□□ -0.93
PDGFB-202ENST00000381551 VAMP3Q15836 100 aa9.25□□□□□ -0.93
PDGFB-202ENST00000381551 DHRS4-AS1Q9P1J3 65 aa9.25□□□□□ -0.93
PDGFB-202ENST00000381551 K7ERJ3 54 aa9.24□□□□□ -0.93
PDGFB-202ENST00000381551 M0R143 59 aa9.24□□□□□ -0.93
PDGFB-202ENST00000381551 DMBT1Q9UGM3 2413 aaPredicted RBP9.24□□□□□ -0.93
PDGFB-202ENST00000381551 HERC1Q15751 4861 aa9.24□□□□□ -0.93
PDGFB-202ENST00000381551 SPRR4Q96PI1 79 aa9.23□□□□□ -0.93
PDGFB-202ENST00000381551 ANAPC11Q9NYG5 84 aa9.22□□□□□ -0.93
PDGFB-202ENST00000381551 TNXBP22105 4242 aa9.22□□□□□ -0.93
PDGFB-202ENST00000381551 Q1RN00 199 aa9.21□□□□□ -0.94
PDGFB-202ENST00000381551 ZNF706Q9Y5V0 76 aaPredicted RBP9.21□□□□□ -0.94
PDGFB-202ENST00000381551 MT1HL1P0DM35 61 aa9.2□□□□□ -0.94
PDGFB-202ENST00000381551 KRTAP10-8P60410 259 aa9.2□□□□□ -0.94
PDGFB-202ENST00000381551 PRR26Q8N8Z3 221 aa9.2□□□□□ -0.94
PDGFB-202ENST00000381551 FAM229BQ4G0N7 80 aa9.19□□□□□ -0.94
PDGFB-202ENST00000381551 LINC00575Q6W349 94 aa9.19□□□□□ -0.94
PDGFB-202ENST00000381551 ST20-AS1Q8NBB2 130 aa9.19□□□□□ -0.94
PDGFB-202ENST00000381551 H0YGX0 51 aa9.18□□□□□ -0.94
PDGFB-202ENST00000381551 GAGE2AQ6NT46 116 aa9.18□□□□□ -0.94
PDGFB-202ENST00000381551 A0A087X002 238 aa9.17□□□□□ -0.94
PDGFB-202ENST00000381551 TSPAN13O95857 204 aa9.17□□□□□ -0.94
PDGFB-202ENST00000381551 LINC00483Q53H64 154 aa9.17□□□□□ -0.94
PDGFB-202ENST00000381551 J3QL48 77 aa9.16□□□□□ -0.94
PDGFB-202ENST00000381551 TRIAP1O43715 76 aa9.16□□□□□ -0.94
PDGFB-202ENST00000381551 SLC25A20O43772 301 aa9.16□□□□□ -0.94
PDGFB-202ENST00000381551 CRYGAP11844 174 aa9.16□□□□□ -0.94
PDGFB-202ENST00000381551 hADV29S1A0JD25 119 aa9.15□□□□□ -0.94
PDGFB-202ENST00000381551 PSMB2P49721 201 aa9.14□□□□□ -0.95
PDGFB-202ENST00000381551 SPRR1BP22528 89 aa9.13□□□□□ -0.95
PDGFB-202ENST00000381551 BATFQ16520 125 aa9.13□□□□□ -0.95
PDGFB-202ENST00000381551 KRTAP13-2Q52LG2 175 aa9.13□□□□□ -0.95
PDGFB-202ENST00000381551 FAM218AQ96MZ4 157 aa9.13□□□□□ -0.95
PDGFB-202ENST00000381551 DEFB105AQ8NG35 78 aa9.12□□□□□ -0.95
PDGFB-202ENST00000381551 IGLV5-48A0A075B6I7 105 aa9.11□□□□□ -0.95
PDGFB-202ENST00000381551 COX6CP09669 75 aa9.11□□□□□ -0.95
PDGFB-202ENST00000381551 LINC01547P58512 204 aaPredicted RBP9.11□□□□□ -0.95
PDGFB-202ENST00000381551 TEX49A0A1B0GTD5 131 aa9.1□□□□□ -0.95
PDGFB-202ENST00000381551 SNCGO76070 127 aa9.09□□□□□ -0.95
PDGFB-202ENST00000381551 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.09□□□□□ -0.95
PDGFB-202ENST00000381551 Q6ZQY7 126 aa9.09□□□□□ -0.95
PDGFB-202ENST00000381551 C3orf22Q8N5N4 141 aa9.09□□□□□ -0.95
PDGFB-202ENST00000381551 TYMSOSQ8TAI1 123 aa9.09□□□□□ -0.95
PDGFB-202ENST00000381551 A0A1B0GX51 115 aa9.08□□□□□ -0.96
PDGFB-202ENST00000381551 SCGB1C2P0DMR2 95 aa9.08□□□□□ -0.96
PDGFB-202ENST00000381551 Q8N377 158 aa9.08□□□□□ -0.96
PDGFB-202ENST00000381551 CLEC2BQ92478 149 aa9.08□□□□□ -0.96
PDGFB-202ENST00000381551 SNHG12Q9BXW3 62 aa9.08□□□□□ -0.96
PDGFB-202ENST00000381551 PCP4L1A6NKN8 68 aa9.07□□□□□ -0.96
PDGFB-202ENST00000381551 SMIM29Q86T20 159 aa9.06□□□□□ -0.96
PDGFB-202ENST00000381551 NAA38Q9BRA0 125 aaKnown RBP9.05□□□□□ -0.96
PDGFB-202ENST00000381551 LAMTOR3Q9UHA4 124 aa9.05□□□□□ -0.96
PDGFB-202ENST00000381551 IGLV9-49A0A0B4J1Y8 123 aa9.04□□□□□ -0.96
PDGFB-202ENST00000381551 TAX1BP3O14907 124 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms