RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 VPREB1P12018 145 aa9.16□□□□□ -0.94
VCX3A-201ENST00000381089 NPC2P61916 151 aa9.16□□□□□ -0.94
VCX3A-201ENST00000381089 C3orf22Q8N5N4 141 aa9.16□□□□□ -0.94
VCX3A-201ENST00000381089 M0R378 163 aa9.15□□□□□ -0.94
VCX3A-201ENST00000381089 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.94
VCX3A-201ENST00000381089 HIGD2AQ9BW72 106 aa9.15□□□□□ -0.94
VCX3A-201ENST00000381089 C14orf144Q96I85 54 aa9.14□□□□□ -0.95
VCX3A-201ENST00000381089 LITAFQ99732 161 aa9.14□□□□□ -0.95
VCX3A-201ENST00000381089 ZNF706Q9Y5V0 76 aaPredicted RBP9.14□□□□□ -0.95
VCX3A-201ENST00000381089 LOC105371267A0A1B0GV96 52 aa9.13□□□□□ -0.95
VCX3A-201ENST00000381089 LINC01547P58512 204 aaPredicted RBP9.13□□□□□ -0.95
VCX3A-201ENST00000381089 BOD1L2Q8IYS8 172 aa9.13□□□□□ -0.95
VCX3A-201ENST00000381089 Q8NDZ9 215 aa9.13□□□□□ -0.95
VCX3A-201ENST00000381089 TIMM17BO60830 172 aa9.12□□□□□ -0.95
VCX3A-201ENST00000381089 COX8AP10176 69 aa9.12□□□□□ -0.95
VCX3A-201ENST00000381089 MIEN1Q9BRT3 115 aa9.12□□□□□ -0.95
VCX3A-201ENST00000381089 SOSTDC1Q6X4U4 206 aa9.11□□□□□ -0.95
VCX3A-201ENST00000381089 EIF4EBP3O60516 100 aaPredicted RBP9.1□□□□□ -0.95
VCX3A-201ENST00000381089 SPRR4Q96PI1 79 aa9.1□□□□□ -0.95
VCX3A-201ENST00000381089 NCR3O14931 201 aa9.09□□□□□ -0.95
VCX3A-201ENST00000381089 S100A12P80511 92 aa9.09□□□□□ -0.95
VCX3A-201ENST00000381089 ASB16-AS1Q495Z4 193 aa9.09□□□□□ -0.95
VCX3A-201ENST00000381089 SMIM6P0DI80 62 aa9.08□□□□□ -0.96
VCX3A-201ENST00000381089 SEC61BP60468 96 aaKnown RBP9.08□□□□□ -0.96
VCX3A-201ENST00000381089 SLC25A34Q6PIV7 304 aa9.08□□□□□ -0.96
VCX3A-201ENST00000381089 LINC00308Q8TCZ7 52 aa9.08□□□□□ -0.96
VCX3A-201ENST00000381089 KRTAP13-3Q3SY46 172 aa9.07□□□□□ -0.96
VCX3A-201ENST00000381089 SPANXDQ9BXN6 97 aa9.07□□□□□ -0.96
VCX3A-201ENST00000381089 SPANXCQ9NY87 97 aa9.07□□□□□ -0.96
VCX3A-201ENST00000381089 DLEU1O43261 78 aa9.06□□□□□ -0.96
VCX3A-201ENST00000381089 SPINK1P00995 79 aa9.06□□□□□ -0.96
VCX3A-201ENST00000381089 Q8NBF4 154 aa9.06□□□□□ -0.96
VCX3A-201ENST00000381089 LOC107984156A0A0G2JMH3 177 aa9.04□□□□□ -0.96
VCX3A-201ENST00000381089 MUSTN1Q8IVN3 82 aa9.04□□□□□ -0.96
VCX3A-201ENST00000381089 ARL17AQ8IVW1 177 aa9.04□□□□□ -0.96
VCX3A-201ENST00000381089 PRYO14603 147 aa9.03□□□□□ -0.96
VCX3A-201ENST00000381089 C2orf91Q6ZV80 131 aa9.03□□□□□ -0.96
VCX3A-201ENST00000381089 SPANXB1Q9NS25 103 aaPredicted RBP9.03□□□□□ -0.96
VCX3A-201ENST00000381089 IFITM1P13164 125 aa9.02□□□□□ -0.97
VCX3A-201ENST00000381089 Q6ZVH6 145 aa9.02□□□□□ -0.97
VCX3A-201ENST00000381089 HIST1H4GQ99525 98 aa9.02□□□□□ -0.97
VCX3A-201ENST00000381089 PRO1933Q9H354 126 aa9.02□□□□□ -0.97
VCX3A-201ENST00000381089 LCE2DQ5TA82 110 aaPredicted RBP9.01□□□□□ -0.97
VCX3A-201ENST00000381089 COPS9Q8WXC6 57 aa9.01□□□□□ -0.97
VCX3A-201ENST00000381089 ETDCA0A1B0GVM5 59 aa9□□□□□ -0.97
VCX3A-201ENST00000381089 NDUFC2O95298 119 aa9□□□□□ -0.97
VCX3A-201ENST00000381089 UQCR10Q9UDW1 63 aa9□□□□□ -0.97
VCX3A-201ENST00000381089 SMCR5Q8TEV8 140 aa8.99□□□□□ -0.97
VCX3A-201ENST00000381089 C12orf57Q99622 126 aa8.99□□□□□ -0.97
VCX3A-201ENST00000381089 HIGD1BQ9P298 99 aa8.99□□□□□ -0.97
VCX3A-201ENST00000381089 TRBV10-3A0A0K0K1G6 114 aa8.98□□□□□ -0.97
VCX3A-201ENST00000381089 TRBV10-2A0A0K0K1G8 114 aa8.98□□□□□ -0.97
VCX3A-201ENST00000381089 S100A7L2Q5SY68 101 aa8.98□□□□□ -0.97
VCX3A-201ENST00000381089 DDTP30046 118 aa8.97□□□□□ -0.97
VCX3A-201ENST00000381089 RPS29P62273 56 aaKnown RBP8.97□□□□□ -0.97
VCX3A-201ENST00000381089 OR13C6PQ8NH95 151 aa8.97□□□□□ -0.97
VCX3A-201ENST00000381089 KCNQ1DNQ9H478 68 aa8.97□□□□□ -0.97
VCX3A-201ENST00000381089 A4D1N5 150 aa8.96□□□□□ -0.98
VCX3A-201ENST00000381089 SPRR1AP35321 89 aa8.96□□□□□ -0.98
VCX3A-201ENST00000381089 LINC00483Q53H64 154 aa8.96□□□□□ -0.98
VCX3A-201ENST00000381089 SLC25A20O43772 301 aa8.95□□□□□ -0.98
VCX3A-201ENST00000381089 GAGE2AQ6NT46 116 aa8.95□□□□□ -0.98
VCX3A-201ENST00000381089 MOBPQ13875 183 aa8.94□□□□□ -0.98
VCX3A-201ENST00000381089 SSBP3-AS1Q7Z2R9 100 aa8.94□□□□□ -0.98
VCX3A-201ENST00000381089 KRTAP4-1Q9BYQ7 146 aa8.94□□□□□ -0.98
VCX3A-201ENST00000381089 CRCT1Q9UGL9 99 aa8.94□□□□□ -0.98
VCX3A-201ENST00000381089 IGLV9-49A0A0B4J1Y8 123 aa8.93□□□□□ -0.98
VCX3A-201ENST00000381089 A6NDN8 102 aa8.93□□□□□ -0.98
VCX3A-201ENST00000381089 IGLV6-57P01721 117 aa8.93□□□□□ -0.98
VCX3A-201ENST00000381089 LINC00518Q8N0U6 118 aa8.93□□□□□ -0.98
VCX3A-201ENST00000381089 Q8N377 158 aa8.93□□□□□ -0.98
VCX3A-201ENST00000381089 HSD52Q0P140 79 aa8.92□□□□□ -0.98
VCX3A-201ENST00000381089 FSIP2Q5CZC0 6907 aa8.91□□□□□ -0.98
VCX3A-201ENST00000381089 TRAV23DV6A0A075B6W5 121 aa8.91□□□□□ -0.98
VCX3A-201ENST00000381089 KRTAP4-16G5E9R7 235 aaPredicted RBP8.91□□□□□ -0.98
VCX3A-201ENST00000381089 TAL2Q16559 108 aa8.91□□□□□ -0.98
VCX3A-201ENST00000381089 CEND1Q8N111 149 aa8.91□□□□□ -0.98
VCX3A-201ENST00000381089 TSTD3H0UI37 97 aa8.9□□□□□ -0.98
VCX3A-201ENST00000381089 XP32Q5T750 250 aa8.9□□□□□ -0.98
VCX3A-201ENST00000381089 TRAV13-2A0A0B4J235 113 aa8.89□□□□□ -0.99
VCX3A-201ENST00000381089 FXYD2P54710 66 aa8.89□□□□□ -0.99
VCX3A-201ENST00000381089 B5MCH6 92 aa8.88□□□□□ -0.99
VCX3A-201ENST00000381089 ZNF73O43830 326 aaPredicted RBP8.87□□□□□ -0.99
VCX3A-201ENST00000381089 RAB37Q96AX2 223 aa8.86□□□□□ -0.99
VCX3A-201ENST00000381089 TMEM238LA0A1B0GVL6 79 aa8.85□□□□□ -0.99
VCX3A-201ENST00000381089 A6NJY4 79 aa8.85□□□□□ -0.99
VCX3A-201ENST00000381089 H7C2G1 150 aa8.85□□□□□ -0.99
VCX3A-201ENST00000381089 CFC1BP0CG36 223 aa8.85□□□□□ -0.99
VCX3A-201ENST00000381089 CFC1P0CG37 223 aa8.85□□□□□ -0.99
VCX3A-201ENST00000381089 C9orf153Q5TBE3 101 aa8.85□□□□□ -0.99
VCX3A-201ENST00000381089 CBY1Q9Y3M2 126 aa8.85□□□□□ -0.99
VCX3A-201ENST00000381089 ERC2-IT1O76042 136 aa8.84□□□□□ -0.99
VCX3A-201ENST00000381089 C6orf99Q4VX62 202 aa8.84□□□□□ -0.99
VCX3A-201ENST00000381089 Q6ZRX8 168 aa8.84□□□□□ -0.99
VCX3A-201ENST00000381089 NHP2Q9NX24 153 aaKnown RBP8.84□□□□□ -0.99
VCX3A-201ENST00000381089 A0A0B4J2C4 111 aa8.83□□□□□ -1
VCX3A-201ENST00000381089 K7ERJ3 54 aa8.83□□□□□ -1
VCX3A-201ENST00000381089 SMIM11BQ8TCY0 68 aa8.83□□□□□ -1
VCX3A-201ENST00000381089 HINT1P49773 126 aaPredicted RBP8.82□□□□□ -1
VCX3A-201ENST00000381089 BVES-AS1Q5T3Y7 98 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms