RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 H7BZZ5 65 aa10.67□□□□□ -0.7
NKX3-1-201ENST00000380871 RMI2Q96E14 147 aa10.67□□□□□ -0.7
NKX3-1-201ENST00000380871 C4orf26Q17RF5 130 aa10.67□□□□□ -0.7
NKX3-1-201ENST00000380871 LINC00528Q8N1L1 170 aa10.67□□□□□ -0.7
NKX3-1-201ENST00000380871 TM2D3Q9BRN9 247 aa10.67□□□□□ -0.7
NKX3-1-201ENST00000380871 PDE6GP18545 87 aa10.66□□□□□ -0.7
NKX3-1-201ENST00000380871 CXCL6P80162 114 aa10.66□□□□□ -0.7
NKX3-1-201ENST00000380871 NDUFC2-KCTD14E9PQ53 114 aa10.66□□□□□ -0.7
NKX3-1-201ENST00000380871 M0R378 163 aa10.66□□□□□ -0.7
NKX3-1-201ENST00000380871 DEFB105AQ8NG35 78 aa10.64□□□□□ -0.71
NKX3-1-201ENST00000380871 FAM236DA0A1B0GTK5 79 aa10.64□□□□□ -0.71
NKX3-1-201ENST00000380871 FAM236CP0DP71 79 aa10.64□□□□□ -0.71
NKX3-1-201ENST00000380871 CASC10Q5T4H9 136 aa10.63□□□□□ -0.71
NKX3-1-201ENST00000380871 Q5XG85 94 aa10.63□□□□□ -0.71
NKX3-1-201ENST00000380871 TRBV7-6A0A0J9YX20 115 aa10.63□□□□□ -0.71
NKX3-1-201ENST00000380871 K7EIL1 84 aa10.62□□□□□ -0.71
NKX3-1-201ENST00000380871 H3BNG1 76 aa10.62□□□□□ -0.71
NKX3-1-201ENST00000380871 C3orf84H3BNL1 204 aa10.62□□□□□ -0.71
NKX3-1-201ENST00000380871 SERTAD4-AS1Q5TG53 156 aa10.62□□□□□ -0.71
NKX3-1-201ENST00000380871 LINC00588Q9Y4M8 146 aa10.6□□□□□ -0.71
NKX3-1-201ENST00000380871 H3BQ85 93 aa10.6□□□□□ -0.71
NKX3-1-201ENST00000380871 HRCT1Q6UXD1 115 aa10.6□□□□□ -0.71
NKX3-1-201ENST00000380871 BPY2O14599 106 aa10.59□□□□□ -0.71
NKX3-1-201ENST00000380871 SYCNQ0VAF6 134 aa10.59□□□□□ -0.71
NKX3-1-201ENST00000380871 LINC01556Q5JQF7 62 aa10.59□□□□□ -0.71
NKX3-1-201ENST00000380871 STAB2Q8WWQ8 2551 aa10.59□□□□□ -0.71
NKX3-1-201ENST00000380871 F8WEM9 126 aa10.59□□□□□ -0.71
NKX3-1-201ENST00000380871 KLKP1Q107X0 134 aa10.59□□□□□ -0.71
NKX3-1-201ENST00000380871 C5orf47Q569G3 176 aa10.59□□□□□ -0.71
NKX3-1-201ENST00000380871 RPL37AP8A6NKH3 93 aa10.57□□□□□ -0.72
NKX3-1-201ENST00000380871 C7orf33Q8WU49 177 aa10.57□□□□□ -0.72
NKX3-1-201ENST00000380871 FAM168BA1KXE4 195 aa10.56□□□□□ -0.72
NKX3-1-201ENST00000380871 BCE1O60756 84 aa10.56□□□□□ -0.72
NKX3-1-201ENST00000380871 NREPQ16612 68 aa10.55□□□□□ -0.72
NKX3-1-201ENST00000380871 Q8N377 158 aa10.55□□□□□ -0.72
NKX3-1-201ENST00000380871 NKAPP1Q8N9T2 125 aa10.55□□□□□ -0.72
NKX3-1-201ENST00000380871 IGKV4-1P06312 121 aa10.54□□□□□ -0.72
NKX3-1-201ENST00000380871 CMYA5Q8N3K9 4069 aa10.53□□□□□ -0.72
NKX3-1-201ENST00000380871 KCNQ1DNQ9H478 68 aa10.52□□□□□ -0.73
NKX3-1-201ENST00000380871 DNAH10OSP0CZ25 163 aa10.51□□□□□ -0.73
NKX3-1-201ENST00000380871 ST20-AS1Q8NBB2 130 aa10.51□□□□□ -0.73
NKX3-1-201ENST00000380871 Q9BRP9 147 aa10.5□□□□□ -0.73
NKX3-1-201ENST00000380871 SERP1Q9Y6X1 66 aa10.5□□□□□ -0.73
NKX3-1-201ENST00000380871 TMEM254Q8TBM7 123 aa10.49□□□□□ -0.73
NKX3-1-201ENST00000380871 EPM2AB3EWF7 344 aa10.48□□□□□ -0.73
NKX3-1-201ENST00000380871 KRTAP7-1Q8IUC3 87 aa10.47□□□□□ -0.73
NKX3-1-201ENST00000380871 MDFIQ99750 246 aa10.47□□□□□ -0.73
NKX3-1-201ENST00000380871 LYSTQ99698 3801 aa10.47□□□□□ -0.73
NKX3-1-201ENST00000380871 TENM2Q9NT68 2774 aa10.47□□□□□ -0.73
NKX3-1-201ENST00000380871 UBE2DNLQ8IWF7 75 aa10.46□□□□□ -0.73
NKX3-1-201ENST00000380871 DNAH1Q9P2D7 4330 aa10.45□□□□□ -0.74
NKX3-1-201ENST00000380871 A0A1W2PNM2 257 aa10.45□□□□□ -0.74
NKX3-1-201ENST00000380871 Q6ZRX8 168 aa10.45□□□□□ -0.74
NKX3-1-201ENST00000380871 IGKV2-24A0A0C4DH68 120 aa10.45□□□□□ -0.74
NKX3-1-201ENST00000380871 IGLV5-48A0A075B6I7 105 aa10.45□□□□□ -0.74
NKX3-1-201ENST00000380871 ERC2-IT1O76042 136 aa10.45□□□□□ -0.74
NKX3-1-201ENST00000380871 OCR1Q9BZK8 76 aa10.45□□□□□ -0.74
NKX3-1-201ENST00000380871 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.44□□□□□ -0.74
NKX3-1-201ENST00000380871 KRTAP4-16G5E9R7 235 aaPredicted RBP10.43□□□□□ -0.74
NKX3-1-201ENST00000380871 FP248Q71RG6 208 aaPredicted RBP10.43□□□□□ -0.74
NKX3-1-201ENST00000380871 LINC00474Q9P2X8 69 aa10.43□□□□□ -0.74
NKX3-1-201ENST00000380871 A0A0G2JQZ4 141 aa10.43□□□□□ -0.74
NKX3-1-201ENST00000380871 A0A1W2PNN7 141 aa10.43□□□□□ -0.74
NKX3-1-201ENST00000380871 PSCAO43653 123 aa10.43□□□□□ -0.74
NKX3-1-201ENST00000380871 DNAH10Q8IVF4 4471 aa10.43□□□□□ -0.74
NKX3-1-201ENST00000380871 CSMD3Q7Z407 3707 aa10.42□□□□□ -0.74
NKX3-1-201ENST00000380871 IGLV1-50A0A075B6I6 118 aa10.41□□□□□ -0.74
NKX3-1-201ENST00000380871 ETDCA0A1B0GVM5 59 aa10.41□□□□□ -0.74
NKX3-1-201ENST00000380871 SMIM29Q86T20 159 aa10.41□□□□□ -0.74
NKX3-1-201ENST00000380871 HIGD2AQ9BW72 106 aa10.41□□□□□ -0.74
NKX3-1-201ENST00000380871 C1orf137Q5JT78 98 aa10.41□□□□□ -0.74
NKX3-1-201ENST00000380871 FAM30AQ9NZY2 134 aa10.41□□□□□ -0.74
NKX3-1-201ENST00000380871 SRRM2Q9UQ35 2752 aaKnown RBP10.4□□□□□ -0.74
NKX3-1-201ENST00000380871 KRTAP1-5Q9BYS1 174 aa10.4□□□□□ -0.74
NKX3-1-201ENST00000380871 FUSP35637 526 aaKnown RBP eCLIP10.39□□□□□ -0.75
NKX3-1-201ENST00000380871 DHRS4-AS1Q9P1J3 65 aa10.39□□□□□ -0.75
NKX3-1-201ENST00000380871 TNP2Q05952 138 aa10.38□□□□□ -0.75
NKX3-1-201ENST00000380871 A0A0U1RQV1 116 aa10.38□□□□□ -0.75
NKX3-1-201ENST00000380871 NDUFC1O43677 76 aa10.38□□□□□ -0.75
NKX3-1-201ENST00000380871 FAM229BQ4G0N7 80 aa10.38□□□□□ -0.75
NKX3-1-201ENST00000380871 DNAH3Q8TD57 4116 aa10.38□□□□□ -0.75
NKX3-1-201ENST00000380871 PRYO14603 147 aa10.37□□□□□ -0.75
NKX3-1-201ENST00000380871 TLX1NBP0CAT3 122 aa10.37□□□□□ -0.75
NKX3-1-201ENST00000380871 COL7A1Q02388 2944 aa10.37□□□□□ -0.75
NKX3-1-201ENST00000380871 SPRR1AP35321 89 aa10.36□□□□□ -0.75
NKX3-1-201ENST00000380871 F8WDY8 70 aa10.36□□□□□ -0.75
NKX3-1-201ENST00000380871 UBE2BP63146 152 aa10.36□□□□□ -0.75
NKX3-1-201ENST00000380871 LINC00336Q6ZUF6 198 aa10.35□□□□□ -0.75
NKX3-1-201ENST00000380871 MRPL55Q7Z7F7 128 aaKnown RBP10.35□□□□□ -0.75
NKX3-1-201ENST00000380871 Q8NBF4 154 aa10.35□□□□□ -0.75
NKX3-1-201ENST00000380871 PLA2G2DQ9UNK4 145 aa10.34□□□□□ -0.75
NKX3-1-201ENST00000380871 SMIM26A0A096LP01 95 aa10.33□□□□□ -0.76
NKX3-1-201ENST00000380871 K7EQZ3 153 aa10.33□□□□□ -0.76
NKX3-1-201ENST00000380871 DSCR10P59022 87 aa10.33□□□□□ -0.76
NKX3-1-201ENST00000380871 DEFB116Q30KQ4 102 aa10.32□□□□□ -0.76
NKX3-1-201ENST00000380871 HUWE1Q7Z6Z7 4374 aaKnown RBP10.32□□□□□ -0.76
NKX3-1-201ENST00000380871 IGLV5-37A0A075B6J1 123 aa10.31□□□□□ -0.76
NKX3-1-201ENST00000380871 CHTF8P0CG12 524 aa10.3□□□□□ -0.76
NKX3-1-201ENST00000380871 MPLKIPQ8TAP9 179 aa10.29□□□□□ -0.76
NKX3-1-201ENST00000380871 A0A096LNI7 61 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms