RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 FAM168BA1KXE4 195 aa13.04□□□□□ -0.32
EBF1-202ENST00000380654 HAMPP81172 84 aa13.04□□□□□ -0.32
EBF1-202ENST00000380654 SERP2Q8N6R1 65 aa13.03□□□□□ -0.32
EBF1-202ENST00000380654 TM2D3Q9BRN9 247 aa13.03□□□□□ -0.32
EBF1-202ENST00000380654 DNAH10Q8IVF4 4471 aa13.02□□□□□ -0.32
EBF1-202ENST00000380654 K7EIL1 84 aa13.02□□□□□ -0.32
EBF1-202ENST00000380654 PDE6GP18545 87 aa13.02□□□□□ -0.32
EBF1-202ENST00000380654 LINC01547P58512 204 aaPredicted RBP13.02□□□□□ -0.32
EBF1-202ENST00000380654 CRYGAP11844 174 aa13.02□□□□□ -0.33
EBF1-202ENST00000380654 SMIM20Q8N5G0 67 aa13.01□□□□□ -0.33
EBF1-202ENST00000380654 KCNQ1DNQ9H478 68 aa13.01□□□□□ -0.33
EBF1-202ENST00000380654 RPL37AP8A6NKH3 93 aa13□□□□□ -0.33
EBF1-202ENST00000380654 COL7A1Q02388 2944 aa12.99□□□□□ -0.33
EBF1-202ENST00000380654 GHRHP01286 108 aa12.99□□□□□ -0.33
EBF1-202ENST00000380654 MGAM2Q2M2H8 2515 aa12.99□□□□□ -0.33
EBF1-202ENST00000380654 TLX1NBP0CAT3 122 aa12.98□□□□□ -0.33
EBF1-202ENST00000380654 DEFB105AQ8NG35 78 aa12.97□□□□□ -0.33
EBF1-202ENST00000380654 KRTAP7-1Q8IUC3 87 aa12.96□□□□□ -0.33
EBF1-202ENST00000380654 SCXQ7RTU7 201 aa12.96□□□□□ -0.34
EBF1-202ENST00000380654 DNAH9Q9NYC9 4486 aa12.94□□□□□ -0.34
EBF1-202ENST00000380654 STAB2Q8WWQ8 2551 aa12.93□□□□□ -0.34
EBF1-202ENST00000380654 Q8N377 158 aa12.93□□□□□ -0.34
EBF1-202ENST00000380654 PLA2G2DQ9UNK4 145 aa12.92□□□□□ -0.34
EBF1-202ENST00000380654 Q9BRP9 147 aa12.91□□□□□ -0.34
EBF1-202ENST00000380654 IGLV1-50A0A075B6I6 118 aa12.91□□□□□ -0.34
EBF1-202ENST00000380654 KRTAP4-16G5E9R7 235 aaPredicted RBP12.9□□□□□ -0.34
EBF1-202ENST00000380654 FAM19A5Q7Z5A7 132 aaPredicted RBP12.9□□□□□ -0.34
EBF1-202ENST00000380654 CXCL6P80162 114 aa12.9□□□□□ -0.34
EBF1-202ENST00000380654 Q6ZRX8 168 aa12.9□□□□□ -0.34
EBF1-202ENST00000380654 RMI2Q96E14 147 aa12.89□□□□□ -0.35
EBF1-202ENST00000380654 IGLV5-37A0A075B6J1 123 aa12.88□□□□□ -0.35
EBF1-202ENST00000380654 KRTAP1-5Q9BYS1 174 aa12.87□□□□□ -0.35
EBF1-202ENST00000380654 ST20-AS1Q8NBB2 130 aa12.86□□□□□ -0.35
EBF1-202ENST00000380654 ETDCA0A1B0GVM5 59 aa12.85□□□□□ -0.35
EBF1-202ENST00000380654 PRYO14603 147 aa12.85□□□□□ -0.35
EBF1-202ENST00000380654 C3orf84H3BNL1 204 aa12.85□□□□□ -0.35
EBF1-202ENST00000380654 SPRR1AP35321 89 aa12.85□□□□□ -0.35
EBF1-202ENST00000380654 MRPL55Q7Z7F7 128 aaKnown RBP12.85□□□□□ -0.35
EBF1-202ENST00000380654 DNAH7Q8WXX0 4024 aa12.85□□□□□ -0.35
EBF1-202ENST00000380654 DHRS4-AS1Q9P1J3 65 aa12.84□□□□□ -0.35
EBF1-202ENST00000380654 TENM2Q9NT68 2774 aa12.83□□□□□ -0.36
EBF1-202ENST00000380654 LOC107984640A0A0U1RRK4 108 aa12.83□□□□□ -0.36
EBF1-202ENST00000380654 Q8N9L7 120 aa12.82□□□□□ -0.36
EBF1-202ENST00000380654 CSMD3Q7Z407 3707 aa12.82□□□□□ -0.36
EBF1-202ENST00000380654 ERC2-IT1O76042 136 aa12.82□□□□□ -0.36
EBF1-202ENST00000380654 C20orf197Q8N268 126 aa12.81□□□□□ -0.36
EBF1-202ENST00000380654 IGLV5-48A0A075B6I7 105 aa12.8□□□□□ -0.36
EBF1-202ENST00000380654 NREPQ16612 68 aa12.78□□□□□ -0.36
EBF1-202ENST00000380654 TRAV7A0A075B6U4 112 aa12.77□□□□□ -0.37
EBF1-202ENST00000380654 IGKV2-24A0A0C4DH68 120 aa12.77□□□□□ -0.37
EBF1-202ENST00000380654 TMEM258P61165 79 aa12.77□□□□□ -0.37
EBF1-202ENST00000380654 UBE2BP63146 152 aa12.77□□□□□ -0.37
EBF1-202ENST00000380654 A0A096LNI7 61 aa12.76□□□□□ -0.37
EBF1-202ENST00000380654 A0A1W2PNM2 257 aa12.74□□□□□ -0.37
EBF1-202ENST00000380654 TNP2Q05952 138 aa12.74□□□□□ -0.37
EBF1-202ENST00000380654 REG3GQ6UW15 175 aa12.74□□□□□ -0.37
EBF1-202ENST00000380654 DYNC2H1Q8NCM8 4307 aaKnown RBP12.74□□□□□ -0.37
EBF1-202ENST00000380654 BPY2O14599 106 aa12.73□□□□□ -0.37
EBF1-202ENST00000380654 BCE1O60756 84 aa12.73□□□□□ -0.37
EBF1-202ENST00000380654 C1orf137Q5JT78 98 aa12.73□□□□□ -0.37
EBF1-202ENST00000380654 PSCAO43653 123 aa12.72□□□□□ -0.37
EBF1-202ENST00000380654 IGKV4-1P06312 121 aa12.72□□□□□ -0.37
EBF1-202ENST00000380654 A0A1W2PNN7 141 aa12.72□□□□□ -0.37
EBF1-202ENST00000380654 PLECQ15149 4684 aaKnown RBP12.72□□□□□ -0.37
EBF1-202ENST00000380654 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.71□□□□□ -0.37
EBF1-202ENST00000380654 UBE2DNLQ8IWF7 75 aa12.71□□□□□ -0.37
EBF1-202ENST00000380654 J3KT08 172 aa12.7□□□□□ -0.38
EBF1-202ENST00000380654 FUSP35637 526 aaKnown RBP eCLIP12.7□□□□□ -0.38
EBF1-202ENST00000380654 DPH3Q96FX2 82 aa12.7□□□□□ -0.38
EBF1-202ENST00000380654 APLNQ9ULZ1 77 aa12.7□□□□□ -0.38
EBF1-202ENST00000380654 C16orf90A8MZG2 172 aa12.68□□□□□ -0.38
EBF1-202ENST00000380654 SNURFQ9Y675 71 aa12.68□□□□□ -0.38
EBF1-202ENST00000380654 PRLHP81277 87 aa12.68□□□□□ -0.38
EBF1-202ENST00000380654 CNBPP62633 177 aaKnown RBP12.67□□□□□ -0.38
EBF1-202ENST00000380654 SRRM2Q9UQ35 2752 aaKnown RBP12.67□□□□□ -0.38
EBF1-202ENST00000380654 A0A0G2JQZ4 141 aa12.66□□□□□ -0.38
EBF1-202ENST00000380654 SMIM29Q86T20 159 aa12.66□□□□□ -0.38
EBF1-202ENST00000380654 Q8NBF4 154 aa12.66□□□□□ -0.38
EBF1-202ENST00000380654 CHTF8P0CG12 524 aa12.65□□□□□ -0.38
EBF1-202ENST00000380654 H7BZZ5 65 aa12.63□□□□□ -0.39
EBF1-202ENST00000380654 OXTP01178 125 aa12.63□□□□□ -0.39
EBF1-202ENST00000380654 RPS28P62857 69 aaKnown RBP12.62□□□□□ -0.39
EBF1-202ENST00000380654 KLKP1Q107X0 134 aa12.62□□□□□ -0.39
EBF1-202ENST00000380654 KRTAP11-1Q8IUC1 163 aa12.62□□□□□ -0.39
EBF1-202ENST00000380654 MDFIQ99750 246 aa12.62□□□□□ -0.39
EBF1-202ENST00000380654 LINC00476Q8WZB0 136 aa12.61□□□□□ -0.39
EBF1-202ENST00000380654 SPRR4Q96PI1 79 aa12.61□□□□□ -0.39
EBF1-202ENST00000380654 HIGD2AQ9BW72 106 aa12.6□□□□□ -0.39
EBF1-202ENST00000380654 PHF5AQ7RTV0 110 aaKnown RBP12.59□□□□□ -0.39
EBF1-202ENST00000380654 A0A1B0GW54 56 aa12.58□□□□□ -0.4
EBF1-202ENST00000380654 FAM236DA0A1B0GTK5 79 aa12.55□□□□□ -0.4
EBF1-202ENST00000380654 FAM236CP0DP71 79 aa12.55□□□□□ -0.4
EBF1-202ENST00000380654 IGFL1Q6UW32 110 aa12.55□□□□□ -0.4
EBF1-202ENST00000380654 B9D2Q9BPU9 175 aa12.55□□□□□ -0.4
EBF1-202ENST00000380654 OCR1Q9BZK8 76 aa12.55□□□□□ -0.4
EBF1-202ENST00000380654 F8WEM9 126 aa12.55□□□□□ -0.4
EBF1-202ENST00000380654 STARD9Q9P2P6 4700 aa12.54□□□□□ -0.4
EBF1-202ENST00000380654 DSCR10P59022 87 aa12.53□□□□□ -0.4
EBF1-202ENST00000380654 C14orf177Q52M58 125 aa12.53□□□□□ -0.4
EBF1-202ENST00000380654 LRCOL1A6NCL2 159 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms