RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 MAST4O15021 2626 aa6.33□□□□□ -1.4
PTPRA-204ENST00000380393 TRGV1A0A0A0MS02 117 aa6.32□□□□□ -1.4
PTPRA-204ENST00000380393 NDUFB1O75438 58 aa6.32□□□□□ -1.4
PTPRA-204ENST00000380393 COX7BP24311 80 aa6.32□□□□□ -1.4
PTPRA-204ENST00000380393 ANK3Q12955 4377 aaKnown RBP6.31□□□□□ -1.4
PTPRA-204ENST00000380393 ETDCA0A1B0GVM5 59 aa6.31□□□□□ -1.4
PTPRA-204ENST00000380393 MP68P56378 58 aa6.31□□□□□ -1.4
PTPRA-204ENST00000380393 DEFB136Q30KP8 78 aa6.31□□□□□ -1.4
PTPRA-204ENST00000380393 ST20-AS1Q8NBB2 130 aa6.31□□□□□ -1.4
PTPRA-204ENST00000380393 B4DSR2 109 aa6.3□□□□□ -1.4
PTPRA-204ENST00000380393 KLK12Q9UKR0 248 aa6.3□□□□□ -1.4
PTPRA-204ENST00000380393 LOC101927531A0A1B0GV80 90 aa6.3□□□□□ -1.4
PTPRA-204ENST00000380393 KLK9Q2XQG4 91 aa6.3□□□□□ -1.4
PTPRA-204ENST00000380393 CYSRT1A8MQ03 144 aa6.29□□□□□ -1.4
PTPRA-204ENST00000380393 C3orf84H3BNL1 204 aa6.29□□□□□ -1.4
PTPRA-204ENST00000380393 H3BQ85 93 aa6.29□□□□□ -1.4
PTPRA-204ENST00000380393 LOC100131303A0A0U1RQF7 123 aa6.29□□□□□ -1.4
PTPRA-204ENST00000380393 NSD1Q96L73 2696 aaPredicted RBP6.28□□□□□ -1.4
PTPRA-204ENST00000380393 FSHBP01225 129 aa6.28□□□□□ -1.4
PTPRA-204ENST00000380393 ELOF1P60002 83 aaKnown RBP6.28□□□□□ -1.4
PTPRA-204ENST00000380393 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
PTPRA-204ENST00000380393 HIGD2BQ4VC39 106 aa6.28□□□□□ -1.4
PTPRA-204ENST00000380393 CASC2Q6XLA1 102 aa6.27□□□□□ -1.41
PTPRA-204ENST00000380393 IGHV3OR16-9A0A0B4J2B5 98 aa6.27□□□□□ -1.41
PTPRA-204ENST00000380393 DSCR9P59020 149 aa6.27□□□□□ -1.41
PTPRA-204ENST00000380393 ATRQ13535 2644 aa6.26□□□□□ -1.41
PTPRA-204ENST00000380393 DEFB112Q30KQ8 113 aa6.26□□□□□ -1.41
PTPRA-204ENST00000380393 H3BUA1 57 aa6.26□□□□□ -1.41
PTPRA-204ENST00000380393 IGHV4-59P01825 116 aa6.26□□□□□ -1.41
PTPRA-204ENST00000380393 SLURP1P55000 103 aa6.26□□□□□ -1.41
PTPRA-204ENST00000380393 IGLV1-40P01703 118 aa6.26□□□□□ -1.41
PTPRA-204ENST00000380393 A6NDX4 124 aa6.25□□□□□ -1.41
PTPRA-204ENST00000380393 DEFB114Q30KQ6 69 aa6.25□□□□□ -1.41
PTPRA-204ENST00000380393 WFDC10AQ9H1F0 79 aa6.25□□□□□ -1.41
PTPRA-204ENST00000380393 CLPSL2Q6UWE3 100 aa6.25□□□□□ -1.41
PTPRA-204ENST00000380393 Q9BRP9 147 aa6.25□□□□□ -1.41
PTPRA-204ENST00000380393 ZNF706Q9Y5V0 76 aaPredicted RBP6.25□□□□□ -1.41
PTPRA-204ENST00000380393 IGHV4-28A0A0C4DH34 117 aa6.24□□□□□ -1.41
PTPRA-204ENST00000380393 C18orf65Q6ZTR6 163 aa6.24□□□□□ -1.41
PTPRA-204ENST00000380393 TENM1Q9UKZ4 2725 aa6.24□□□□□ -1.41
PTPRA-204ENST00000380393 KRTAP1-1Q07627 177 aa6.23□□□□□ -1.41
PTPRA-204ENST00000380393 DNAJC9-AS1A6NH13 148 aa6.23□□□□□ -1.41
PTPRA-204ENST00000380393 INSP01308 110 aa6.23□□□□□ -1.41
PTPRA-204ENST00000380393 SPINK7P58062 85 aa6.22□□□□□ -1.41
PTPRA-204ENST00000380393 Q8NDZ9 215 aa6.22□□□□□ -1.41
PTPRA-204ENST00000380393 RETNLBQ9BQ08 111 aa6.22□□□□□ -1.41
PTPRA-204ENST00000380393 NOP10Q9NPE3 64 aaKnown RBP6.22□□□□□ -1.41
PTPRA-204ENST00000380393 SPAG11BQ08648 103 aa6.21□□□□□ -1.42
PTPRA-204ENST00000380393 VWFP04275 2813 aa6.2□□□□□ -1.42
PTPRA-204ENST00000380393 TRGV4A0A0C4DH28 118 aa6.2□□□□□ -1.42
PTPRA-204ENST00000380393 Q8NAQ8 132 aa6.2□□□□□ -1.42
PTPRA-204ENST00000380393 COA5Q86WW8 74 aa6.19□□□□□ -1.42
PTPRA-204ENST00000380393 SPANXA2-OT1Q8N9U9 137 aa6.19□□□□□ -1.42
PTPRA-204ENST00000380393 SPAG11AQ6PDA7 123 aa6.19□□□□□ -1.42
PTPRA-204ENST00000380393 TRRAPQ9Y4A5 3859 aa6.19□□□□□ -1.42
PTPRA-204ENST00000380393 Q8IZM0 81 aa6.19□□□□□ -1.42
PTPRA-204ENST00000380393 MAP6D1Q9H9H5 199 aa6.19□□□□□ -1.42
PTPRA-204ENST00000380393 A0A096LPF7 62 aa6.18□□□□□ -1.42
PTPRA-204ENST00000380393 PLA2G1BP04054 148 aaKnown RBP6.18□□□□□ -1.42
PTPRA-204ENST00000380393 KIAA0087Q14695 138 aa6.18□□□□□ -1.42
PTPRA-204ENST00000380393 INAFM1C9JVW0 142 aa6.18□□□□□ -1.42
PTPRA-204ENST00000380393 LINC00476Q8WZB0 136 aa6.18□□□□□ -1.42
PTPRA-204ENST00000380393 IGHV4-30-4P0DP06 118 aa6.17□□□□□ -1.42
PTPRA-204ENST00000380393 FBN1P35555 2871 aaKnown RBP6.17□□□□□ -1.42
PTPRA-204ENST00000380393 H0Y9J4 135 aa6.17□□□□□ -1.42
PTPRA-204ENST00000380393 KCNQ1DNQ9H478 68 aa6.17□□□□□ -1.42
PTPRA-204ENST00000380393 COX17Q14061 63 aa6.16□□□□□ -1.42
PTPRA-204ENST00000380393 IGLV10-54A0A075B6I4 117 aa6.16□□□□□ -1.42
PTPRA-204ENST00000380393 LINC00959A0A1B0GUT2 108 aa6.16□□□□□ -1.42
PTPRA-204ENST00000380393 LINC01558Q9Y6Z2 57 aa6.16□□□□□ -1.42
PTPRA-204ENST00000380393 STAB1Q9NY15 2570 aa6.16□□□□□ -1.42
PTPRA-204ENST00000380393 K7EQZ3 153 aa6.16□□□□□ -1.42
PTPRA-204ENST00000380393 DEFB116Q30KQ4 102 aa6.16□□□□□ -1.42
PTPRA-204ENST00000380393 Q6YL49 198 aa6.16□□□□□ -1.42
PTPRA-204ENST00000380393 IGLV6-57P01721 117 aa6.15□□□□□ -1.42
PTPRA-204ENST00000380393 ODF3L2Q3SX64 289 aa6.15□□□□□ -1.42
PTPRA-204ENST00000380393 NBEAL2Q6ZNJ1 2754 aa6.15□□□□□ -1.42
PTPRA-204ENST00000380393 COL6A5A8TX70 2615 aa6.14□□□□□ -1.43
PTPRA-204ENST00000380393 DEFB130BP0DP73 79 aa6.14□□□□□ -1.43
PTPRA-204ENST00000380393 DEFB130AP0DP74 79 aa6.14□□□□□ -1.43
PTPRA-204ENST00000380393 WFDC13Q8IUB5 93 aa6.13□□□□□ -1.43
PTPRA-204ENST00000380393 DSCR10P59022 87 aa6.13□□□□□ -1.43
PTPRA-204ENST00000380393 ZNF702PQ9H963 129 aa6.12□□□□□ -1.43
PTPRA-204ENST00000380393 H0Y9P7 68 aa6.11□□□□□ -1.43
PTPRA-204ENST00000380393 PLAC8Q9NZF1 115 aa6.1□□□□□ -1.43
PTPRA-204ENST00000380393 A0A1W2PNM2 257 aa6.1□□□□□ -1.43
PTPRA-204ENST00000380393 DEFB105AQ8NG35 78 aa6.1□□□□□ -1.43
PTPRA-204ENST00000380393 PKD1L1Q8TDX9 2849 aa6.09□□□□□ -1.43
PTPRA-204ENST00000380393 KPRPQ5T749 579 aaPredicted RBP6.09□□□□□ -1.43
PTPRA-204ENST00000380393 CSAG1Q6PB30 78 aa6.09□□□□□ -1.43
PTPRA-204ENST00000380393 WFDC10BQ8IUB3 73 aa6.09□□□□□ -1.43
PTPRA-204ENST00000380393 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
PTPRA-204ENST00000380393 IGLV1-51P01701 117 aa6.07□□□□□ -1.44
PTPRA-204ENST00000380393 ASB16-AS1Q495Z4 193 aa6.07□□□□□ -1.44
PTPRA-204ENST00000380393 C1orf134Q5TEV5 83 aa6.07□□□□□ -1.44
PTPRA-204ENST00000380393 GYPEP15421 78 aa6.07□□□□□ -1.44
PTPRA-204ENST00000380393 CNBPP62633 177 aaKnown RBP6.06□□□□□ -1.44
PTPRA-204ENST00000380393 H3BPC8 53 aa6.06□□□□□ -1.44
PTPRA-204ENST00000380393 ANGP03950 147 aaKnown RBP6.06□□□□□ -1.44
PTPRA-204ENST00000380393 C9orf163Q8N9P6 203 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms