RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ORMDL1Q9P0S3 153 aa5.27□□□□□ -1.57
PDLIM5-204ENST00000380176 ACYP1P07311 99 aa5.27□□□□□ -1.57
PDLIM5-204ENST00000380176 MUC7Q8TAX7 377 aa5.27□□□□□ -1.57
PDLIM5-204ENST00000380176 TRBV10-3A0A0K0K1G6 114 aa5.26□□□□□ -1.57
PDLIM5-204ENST00000380176 TM2D3Q9BRN9 247 aa5.26□□□□□ -1.57
PDLIM5-204ENST00000380176 COL7A1Q02388 2944 aa5.26□□□□□ -1.57
PDLIM5-204ENST00000380176 SDIM1Q6ZPB5 146 aa5.25□□□□□ -1.57
PDLIM5-204ENST00000380176 NDUFC2-KCTD14E9PQ53 114 aa5.25□□□□□ -1.57
PDLIM5-204ENST00000380176 LINC00575Q6W349 94 aa5.25□□□□□ -1.57
PDLIM5-204ENST00000380176 LINC00588Q9Y4M8 146 aa5.25□□□□□ -1.57
PDLIM5-204ENST00000380176 A0A0U1RQV1 116 aa5.25□□□□□ -1.57
PDLIM5-204ENST00000380176 DNAH10OSP0CZ25 163 aa5.25□□□□□ -1.57
PDLIM5-204ENST00000380176 TRAV10A0A0B4J240 114 aa5.24□□□□□ -1.57
PDLIM5-204ENST00000380176 Q6ZRP5 223 aa5.24□□□□□ -1.57
PDLIM5-204ENST00000380176 CASC10Q5T4H9 136 aa5.24□□□□□ -1.57
PDLIM5-204ENST00000380176 Q75L30 129 aa5.23□□□□□ -1.57
PDLIM5-204ENST00000380176 MRPL55Q7Z7F7 128 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-204ENST00000380176 LINC00643Q86TS7 51 aa5.23□□□□□ -1.57
PDLIM5-204ENST00000380176 DNAH9Q9NYC9 4486 aa5.23□□□□□ -1.57
PDLIM5-204ENST00000380176 DNAH10Q8IVF4 4471 aa5.23□□□□□ -1.57
PDLIM5-204ENST00000380176 TRAV23DV6A0A075B6W5 121 aa5.22□□□□□ -1.57
PDLIM5-204ENST00000380176 hADV29S1A0JD25 119 aa5.22□□□□□ -1.57
PDLIM5-204ENST00000380176 TMEM256-PLSCR3K7ERE1 68 aa5.22□□□□□ -1.57
PDLIM5-204ENST00000380176 LINC00846Q9NV44 126 aa5.22□□□□□ -1.57
PDLIM5-204ENST00000380176 LAMTOR3Q9UHA4 124 aa5.22□□□□□ -1.57
PDLIM5-204ENST00000380176 STAB2Q8WWQ8 2551 aa5.22□□□□□ -1.57
PDLIM5-204ENST00000380176 DSCR8Q96T75 97 aa5.22□□□□□ -1.57
PDLIM5-204ENST00000380176 SYCNQ0VAF6 134 aa5.21□□□□□ -1.58
PDLIM5-204ENST00000380176 PRR15Q8IV56 129 aa5.21□□□□□ -1.58
PDLIM5-204ENST00000380176 ZNF73O43830 326 aaPredicted RBP5.21□□□□□ -1.58
PDLIM5-204ENST00000380176 Q6ZQY7 126 aa5.21□□□□□ -1.58
PDLIM5-204ENST00000380176 DIRC1Q969H9 104 aa5.2□□□□□ -1.58
PDLIM5-204ENST00000380176 SERP1Q9Y6X1 66 aa5.2□□□□□ -1.58
PDLIM5-204ENST00000380176 SMIM26A0A096LP01 95 aa5.2□□□□□ -1.58
PDLIM5-204ENST00000380176 CCKP06307 115 aa5.2□□□□□ -1.58
PDLIM5-204ENST00000380176 CSMD3Q7Z407 3707 aa5.2□□□□□ -1.58
PDLIM5-204ENST00000380176 JMJD7-PLA2G4BH0Y9G9 81 aa5.2□□□□□ -1.58
PDLIM5-204ENST00000380176 M0R378 163 aa5.2□□□□□ -1.58
PDLIM5-204ENST00000380176 BRK1Q8WUW1 75 aa5.2□□□□□ -1.58
PDLIM5-204ENST00000380176 DNAH7Q8WXX0 4024 aa5.19□□□□□ -1.58
PDLIM5-204ENST00000380176 ATOX1O00244 68 aa5.19□□□□□ -1.58
PDLIM5-204ENST00000380176 ELOF1P60002 83 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-204ENST00000380176 COX7BP24311 80 aa5.18□□□□□ -1.58
PDLIM5-204ENST00000380176 IGKV3D-7A0A0C4DH55 119 aa5.18□□□□□ -1.58
PDLIM5-204ENST00000380176 UPK3BQ9BT76 320 aa5.18□□□□□ -1.58
PDLIM5-204ENST00000380176 M0R2N4 97 aa5.17□□□□□ -1.58
PDLIM5-204ENST00000380176 HIST1H4AP62805 103 aaKnown RBP5.17□□□□□ -1.58
PDLIM5-204ENST00000380176 FAM168BA1KXE4 195 aa5.17□□□□□ -1.58
PDLIM5-204ENST00000380176 TENM2Q9NT68 2774 aa5.17□□□□□ -1.58
PDLIM5-204ENST00000380176 RBM3P98179 157 aaKnown RBP5.16□□□□□ -1.58
PDLIM5-204ENST00000380176 Q6ZQT0 140 aa5.16□□□□□ -1.58
PDLIM5-204ENST00000380176 C7orf33Q8WU49 177 aa5.16□□□□□ -1.58
PDLIM5-204ENST00000380176 KRTAP1-5Q9BYS1 174 aa5.16□□□□□ -1.58
PDLIM5-204ENST00000380176 TRBV7-6A0A0J9YX20 115 aa5.15□□□□□ -1.58
PDLIM5-204ENST00000380176 KRTAP7-1Q8IUC3 87 aa5.15□□□□□ -1.58
PDLIM5-204ENST00000380176 TLX1NBP0CAT3 122 aa5.15□□□□□ -1.59
PDLIM5-204ENST00000380176 Q6JHZ5 121 aa5.15□□□□□ -1.59
PDLIM5-204ENST00000380176 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.15□□□□□ -1.59
PDLIM5-204ENST00000380176 NKAPP1Q8N9T2 125 aa5.15□□□□□ -1.59
PDLIM5-204ENST00000380176 A0A087WVE0 104 aa5.14□□□□□ -1.59
PDLIM5-204ENST00000380176 RPL37AP8A6NKH3 93 aa5.14□□□□□ -1.59
PDLIM5-204ENST00000380176 DYNC2H1Q8NCM8 4307 aaKnown RBP5.14□□□□□ -1.59
PDLIM5-204ENST00000380176 KCNQ1DNQ9H478 68 aa5.14□□□□□ -1.59
PDLIM5-204ENST00000380176 PLECQ15149 4684 aaKnown RBP5.14□□□□□ -1.59
PDLIM5-204ENST00000380176 LOC110117498A0A087WWA1 95 aa5.13□□□□□ -1.59
PDLIM5-204ENST00000380176 FP248Q71RG6 208 aaPredicted RBP5.13□□□□□ -1.59
PDLIM5-204ENST00000380176 CYSTM1Q9H1C7 97 aa5.13□□□□□ -1.59
PDLIM5-204ENST00000380176 RMI2Q96E14 147 aa5.13□□□□□ -1.59
PDLIM5-204ENST00000380176 RBM12B-AS1Q9P1G2 102 aa5.13□□□□□ -1.59
PDLIM5-204ENST00000380176 SERP2Q8N6R1 65 aa5.12□□□□□ -1.59
PDLIM5-204ENST00000380176 APLNQ9ULZ1 77 aa5.11□□□□□ -1.59
PDLIM5-204ENST00000380176 IGLV1-50A0A075B6I6 118 aa5.11□□□□□ -1.59
PDLIM5-204ENST00000380176 TRBV7-4A0A0J9YYF1 115 aa5.11□□□□□ -1.59
PDLIM5-204ENST00000380176 PRKDCP78527 4128 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-204ENST00000380176 KRTAP4-16G5E9R7 235 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-204ENST00000380176 H3BQ85 93 aa5.1□□□□□ -1.59
PDLIM5-204ENST00000380176 DEFB105AQ8NG35 78 aa5.1□□□□□ -1.59
PDLIM5-204ENST00000380176 IGLV5-37A0A075B6J1 123 aa5.1□□□□□ -1.59
PDLIM5-204ENST00000380176 Q9BRP9 147 aa5.1□□□□□ -1.59
PDLIM5-204ENST00000380176 UBL5Q9BZL1 73 aa5.1□□□□□ -1.59
PDLIM5-204ENST00000380176 UBE2DNLQ8IWF7 75 aa5.09□□□□□ -1.59
PDLIM5-204ENST00000380176 B9D2Q9BPU9 175 aa5.09□□□□□ -1.6
PDLIM5-204ENST00000380176 Q6ZRX8 168 aa5.08□□□□□ -1.6
PDLIM5-204ENST00000380176 Q6ZVQ6 151 aa5.08□□□□□ -1.6
PDLIM5-204ENST00000380176 Q8N377 158 aa5.08□□□□□ -1.6
PDLIM5-204ENST00000380176 C8orf87E5RJ46 101 aa5.08□□□□□ -1.6
PDLIM5-204ENST00000380176 SPRR1AP35321 89 aa5.08□□□□□ -1.6
PDLIM5-204ENST00000380176 LINC01547P58512 204 aaPredicted RBP5.08□□□□□ -1.6
PDLIM5-204ENST00000380176 STARD9Q9P2P6 4700 aa5.08□□□□□ -1.6
PDLIM5-204ENST00000380176 A0A096LNI7 61 aa5.08□□□□□ -1.6
PDLIM5-204ENST00000380176 PSCAO43653 123 aa5.08□□□□□ -1.6
PDLIM5-204ENST00000380176 PDE6GP18545 87 aa5.08□□□□□ -1.6
PDLIM5-204ENST00000380176 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.07□□□□□ -1.6
PDLIM5-204ENST00000380176 IGKV2-24A0A0C4DH68 120 aa5.07□□□□□ -1.6
PDLIM5-204ENST00000380176 ST20-AS1Q8NBB2 130 aa5.07□□□□□ -1.6
PDLIM5-204ENST00000380176 KTN1-AS1Q86SY8 53 aa5.07□□□□□ -1.6
PDLIM5-204ENST00000380176 ETDCA0A1B0GVM5 59 aa5.06□□□□□ -1.6
PDLIM5-204ENST00000380176 ERC2-IT1O76042 136 aa5.06□□□□□ -1.6
PDLIM5-204ENST00000380176 SEC61BP60468 96 aaKnown RBP5.06□□□□□ -1.6
PDLIM5-204ENST00000380176 HAMPP81172 84 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 557 ms