RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 ZNF462Q96JM2 2506 aa10.62□□□□□ -0.71
KCNC1-202ENST00000379472 RPS28P62857 69 aaKnown RBP10.62□□□□□ -0.71
KCNC1-202ENST00000379472 PKD1L2Q7Z442 2459 aa10.61□□□□□ -0.71
KCNC1-202ENST00000379472 PRR15Q8IV56 129 aa10.6□□□□□ -0.71
KCNC1-202ENST00000379472 USP9XQ93008 2570 aaPredicted RBP10.59□□□□□ -0.71
KCNC1-202ENST00000379472 A0A087WTM6 91 aa10.59□□□□□ -0.71
KCNC1-202ENST00000379472 IGF2RP11717 2491 aa10.59□□□□□ -0.71
KCNC1-202ENST00000379472 KTN1-AS1Q86SY8 53 aa10.59□□□□□ -0.71
KCNC1-202ENST00000379472 IGLV7-43P04211 117 aa10.57□□□□□ -0.72
KCNC1-202ENST00000379472 HRES1P13985 223 aa10.56□□□□□ -0.72
KCNC1-202ENST00000379472 LINC01546A6NGU7 62 aa10.55□□□□□ -0.72
KCNC1-202ENST00000379472 C15orf56Q8N910 161 aa10.55□□□□□ -0.72
KCNC1-202ENST00000379472 CD164Q04900 197 aa10.55□□□□□ -0.72
KCNC1-202ENST00000379472 IGLV7-46A0A075B6I9 117 aa10.55□□□□□ -0.72
KCNC1-202ENST00000379472 C9orf163Q8N9P6 203 aa10.54□□□□□ -0.72
KCNC1-202ENST00000379472 K7EIL1 84 aa10.53□□□□□ -0.72
KCNC1-202ENST00000379472 A0A0G2JQZ4 141 aa10.53□□□□□ -0.72
KCNC1-202ENST00000379472 A0A1W2PNN7 141 aa10.53□□□□□ -0.72
KCNC1-202ENST00000379472 Q1T7F1 81 aa10.52□□□□□ -0.73
KCNC1-202ENST00000379472 LCA10Q71F78 164 aa10.5□□□□□ -0.73
KCNC1-202ENST00000379472 KCNQ1DNQ9H478 68 aa10.49□□□□□ -0.73
KCNC1-202ENST00000379472 PRR26Q8N8Z3 221 aa10.49□□□□□ -0.73
KCNC1-202ENST00000379472 PSORS1C2Q9UIG4 136 aa10.49□□□□□ -0.73
KCNC1-202ENST00000379472 CR1P17927 2039 aa10.49□□□□□ -0.73
KCNC1-202ENST00000379472 GOLGB1Q14789 3259 aaKnown RBP10.49□□□□□ -0.73
KCNC1-202ENST00000379472 NCOR2Q9Y618 2525 aa10.48□□□□□ -0.73
KCNC1-202ENST00000379472 WIPF1O43516 503 aa10.48□□□□□ -0.73
KCNC1-202ENST00000379472 KRTAP10-11P60412 298 aa10.48□□□□□ -0.73
KCNC1-202ENST00000379472 ANKRD17O75179 2603 aaKnown RBP10.48□□□□□ -0.73
KCNC1-202ENST00000379472 PLA2G2DQ9UNK4 145 aa10.48□□□□□ -0.73
KCNC1-202ENST00000379472 SMCPP49901 116 aaPredicted RBP10.45□□□□□ -0.74
KCNC1-202ENST00000379472 SETD2Q9BYW2 2564 aaPredicted RBP10.44□□□□□ -0.74
KCNC1-202ENST00000379472 A0A0A0MQY5 61 aa10.43□□□□□ -0.74
KCNC1-202ENST00000379472 Q8N377 158 aa10.4□□□□□ -0.74
KCNC1-202ENST00000379472 S4R3F8 94 aa10.4□□□□□ -0.75
KCNC1-202ENST00000379472 PRO0461Q9UI25 63 aa10.38□□□□□ -0.75
KCNC1-202ENST00000379472 A0A1B0GU33 70 aa10.37□□□□□ -0.75
KCNC1-202ENST00000379472 SPRR4Q96PI1 79 aa10.37□□□□□ -0.75
KCNC1-202ENST00000379472 EP400Q96L91 3159 aa10.36□□□□□ -0.75
KCNC1-202ENST00000379472 CSAG1Q6PB30 78 aa10.35□□□□□ -0.75
KCNC1-202ENST00000379472 PLAC4Q8WY50 150 aa10.34□□□□□ -0.75
KCNC1-202ENST00000379472 LINC00612Q8N6U2 182 aa10.34□□□□□ -0.75
KCNC1-202ENST00000379472 R4GN34 69 aa10.31□□□□□ -0.76
KCNC1-202ENST00000379472 H1FX-AS1Q4G0G2 97 aa10.3□□□□□ -0.76
KCNC1-202ENST00000379472 MTORP42345 2549 aa10.29□□□□□ -0.76
KCNC1-202ENST00000379472 CENPFP49454 3210 aa10.27□□□□□ -0.76
KCNC1-202ENST00000379472 SPINK7P58062 85 aa10.27□□□□□ -0.77
KCNC1-202ENST00000379472 COL4A2P08572 1712 aa10.27□□□□□ -0.77
KCNC1-202ENST00000379472 Q5VSD8 79 aa10.26□□□□□ -0.77
KCNC1-202ENST00000379472 C19orf73Q9NVV2 129 aa10.24□□□□□ -0.77
KCNC1-202ENST00000379472 POLQO75417 2590 aa10.23□□□□□ -0.77
KCNC1-202ENST00000379472 SPTBN4Q9H254 2564 aa10.23□□□□□ -0.77
KCNC1-202ENST00000379472 TNP2Q05952 138 aa10.22□□□□□ -0.77
KCNC1-202ENST00000379472 SPANXA2-OT1Q8N9U9 137 aa10.22□□□□□ -0.77
KCNC1-202ENST00000379472 DMAC1Q96GE9 116 aa10.21□□□□□ -0.77
KCNC1-202ENST00000379472 USP24Q9UPU5 2620 aa10.21□□□□□ -0.77
KCNC1-202ENST00000379472 LITAFQ99732 161 aa10.2□□□□□ -0.78
KCNC1-202ENST00000379472 SEC61BP60468 96 aaKnown RBP10.2□□□□□ -0.78
KCNC1-202ENST00000379472 KLKP1Q107X0 134 aa10.19□□□□□ -0.78
KCNC1-202ENST00000379472 PRR34Q9NV39 138 aa10.19□□□□□ -0.78
KCNC1-202ENST00000379472 CASC10Q5T4H9 136 aa10.18□□□□□ -0.78
KCNC1-202ENST00000379472 C10orf142B7Z368 130 aa10.17□□□□□ -0.78
KCNC1-202ENST00000379472 CNBPP62633 177 aaKnown RBP10.15□□□□□ -0.78
KCNC1-202ENST00000379472 H7BZZ5 65 aa10.13□□□□□ -0.79
KCNC1-202ENST00000379472 BPTFQ12830 3046 aa10.13□□□□□ -0.79
KCNC1-202ENST00000379472 CHD8Q9HCK8 2581 aa10.13□□□□□ -0.79
KCNC1-202ENST00000379472 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.12□□□□□ -0.79
KCNC1-202ENST00000379472 KRTAP10-3P60369 221 aa10.08□□□□□ -0.8
KCNC1-202ENST00000379472 UTRNP46939 3433 aa10.08□□□□□ -0.8
KCNC1-202ENST00000379472 ZCCHC13Q8WW36 166 aaKnown RBP10.08□□□□□ -0.8
KCNC1-202ENST00000379472 FASNP49327 2511 aaKnown RBP10.07□□□□□ -0.8
KCNC1-202ENST00000379472 A0A1W2PNM2 257 aa10.07□□□□□ -0.8
KCNC1-202ENST00000379472 M0QZ58 72 aa10.05□□□□□ -0.8
KCNC1-202ENST00000379472 ANKRD11Q6UB99 2663 aaPredicted RBP10.04□□□□□ -0.8
KCNC1-202ENST00000379472 GIG44P09565 113 aaPredicted RBP10.03□□□□□ -0.8
KCNC1-202ENST00000379472 USP9YO00507 2555 aaPredicted RBP10.01□□□□□ -0.81
KCNC1-202ENST00000379472 EIF4EBP3O60516 100 aaPredicted RBP9.98□□□□□ -0.81
KCNC1-202ENST00000379472 FAM229BQ4G0N7 80 aa9.97□□□□□ -0.81
KCNC1-202ENST00000379472 EPG5Q9HCE0 2579 aa9.97□□□□□ -0.81
KCNC1-202ENST00000379472 H3BS24 57 aa9.97□□□□□ -0.81
KCNC1-202ENST00000379472 DNAH12Q6ZR08 3092 aa9.94□□□□□ -0.82
KCNC1-202ENST00000379472 Q8N9P0 234 aaPredicted RBP9.94□□□□□ -0.82
KCNC1-202ENST00000379472 PRRC2CQ9Y520 2896 aaKnown RBP9.94□□□□□ -0.82
KCNC1-202ENST00000379472 PRAC1Q96KF2 57 aa9.9□□□□□ -0.82
KCNC1-202ENST00000379472 ROMO1P60602 79 aa9.9□□□□□ -0.82
KCNC1-202ENST00000379472 Q75L30 129 aa9.89□□□□□ -0.83
KCNC1-202ENST00000379472 RPL37P61927 97 aaKnown RBP9.87□□□□□ -0.83
KCNC1-202ENST00000379472 ADM2Q7Z4H4 148 aa9.86□□□□□ -0.83
KCNC1-202ENST00000379472 C20orf166-AS1Q96NR2 134 aa9.83□□□□□ -0.84
KCNC1-202ENST00000379472 OXTP01178 125 aa9.81□□□□□ -0.84
KCNC1-202ENST00000379472 Q5W150 140 aa9.81□□□□□ -0.84
KCNC1-202ENST00000379472 OCR1Q9BZK8 76 aa9.81□□□□□ -0.84
KCNC1-202ENST00000379472 MGAM2Q2M2H8 2515 aa9.8□□□□□ -0.84
KCNC1-202ENST00000379472 LINC01558Q9Y6Z2 57 aa9.78□□□□□ -0.84
KCNC1-202ENST00000379472 PLAC8Q9NZF1 115 aa9.77□□□□□ -0.84
KCNC1-202ENST00000379472 KLK9Q2XQG4 91 aa9.76□□□□□ -0.85
KCNC1-202ENST00000379472 C5orf42Q9H799 3197 aa9.72□□□□□ -0.85
KCNC1-202ENST00000379472 MMP24-AS1A0A0U1RRL7 71 aa9.71□□□□□ -0.86
KCNC1-202ENST00000379472 FP248Q71RG6 208 aaPredicted RBP9.7□□□□□ -0.86
KCNC1-202ENST00000379472 SPATA8Q6RVD6 105 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms