RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 APLNQ9ULZ1 77 aa11.19□□□□□ -0.62
MCF2L-203ENST00000375604 KLK9Q2XQG4 91 aa11.18□□□□□ -0.62
MCF2L-203ENST00000375604 Q8N377 158 aa11.18□□□□□ -0.62
MCF2L-203ENST00000375604 ZNF861PO60384 105 aa11.17□□□□□ -0.62
MCF2L-203ENST00000375604 LINC00528Q8N1L1 170 aa11.17□□□□□ -0.62
MCF2L-203ENST00000375604 ERC2-IT1O76042 136 aa11.15□□□□□ -0.62
MCF2L-203ENST00000375604 COA5Q86WW8 74 aa11.15□□□□□ -0.62
MCF2L-203ENST00000375604 PRR34Q9NV39 138 aa11.15□□□□□ -0.62
MCF2L-203ENST00000375604 PSORS1C2Q9UIG4 136 aa11.14□□□□□ -0.63
MCF2L-203ENST00000375604 SPINT4Q6UDR6 99 aa11.13□□□□□ -0.63
MCF2L-203ENST00000375604 C8orf17Q9NRJ1 99 aa11.13□□□□□ -0.63
MCF2L-203ENST00000375604 C8orf87E5RJ46 101 aa11.11□□□□□ -0.63
MCF2L-203ENST00000375604 KRTAP1-1Q07627 177 aa11.11□□□□□ -0.63
MCF2L-203ENST00000375604 MKI67P46013 3256 aaKnown RBP11.11□□□□□ -0.63
MCF2L-203ENST00000375604 SSBP3-AS1Q7Z2R9 100 aa11.11□□□□□ -0.63
MCF2L-203ENST00000375604 LINC01600Q96MT4 127 aa11.1□□□□□ -0.63
MCF2L-203ENST00000375604 LOC101927531A0A1B0GV80 90 aa11.1□□□□□ -0.63
MCF2L-203ENST00000375604 A0A1B0GW54 56 aa11.1□□□□□ -0.63
MCF2L-203ENST00000375604 IGLV7-43P04211 117 aa11.1□□□□□ -0.63
MCF2L-203ENST00000375604 PRR15Q8IV56 129 aa11.08□□□□□ -0.64
MCF2L-203ENST00000375604 ACANP16112 2415 aa11.08□□□□□ -0.64
MCF2L-203ENST00000375604 A8MUN3 132 aa11.08□□□□□ -0.64
MCF2L-203ENST00000375604 LINC01554Q52M75 96 aa11.08□□□□□ -0.64
MCF2L-203ENST00000375604 H3BPC8 53 aa11.07□□□□□ -0.64
MCF2L-203ENST00000375604 A0A1B0GVX0 72 aa11.07□□□□□ -0.64
MCF2L-203ENST00000375604 C9orf163Q8N9P6 203 aa11.05□□□□□ -0.64
MCF2L-203ENST00000375604 Q8N1X5 172 aa11.05□□□□□ -0.64
MCF2L-203ENST00000375604 USP9YO00507 2555 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-203ENST00000375604 PRO0628Q9UI54 55 aa11.03□□□□□ -0.64
MCF2L-203ENST00000375604 IGLV5-37A0A075B6J1 123 aa11.03□□□□□ -0.64
MCF2L-203ENST00000375604 TNP2Q05952 138 aa11.03□□□□□ -0.64
MCF2L-203ENST00000375604 A0A0D9SG42 100 aa11.02□□□□□ -0.64
MCF2L-203ENST00000375604 LINC00612Q8N6U2 182 aa11.02□□□□□ -0.65
MCF2L-203ENST00000375604 MTORP42345 2549 aa11□□□□□ -0.65
MCF2L-203ENST00000375604 BRCA2P51587 3418 aa10.99□□□□□ -0.65
MCF2L-203ENST00000375604 PKD1L2Q7Z442 2459 aa10.99□□□□□ -0.65
MCF2L-203ENST00000375604 ZNF575Q86XF7 245 aa10.98□□□□□ -0.65
MCF2L-203ENST00000375604 SPRR4Q96PI1 79 aa10.98□□□□□ -0.65
MCF2L-203ENST00000375604 TLX1NBP0CAT3 122 aa10.96□□□□□ -0.65
MCF2L-203ENST00000375604 FASNP49327 2511 aaKnown RBP10.95□□□□□ -0.66
MCF2L-203ENST00000375604 IGLV5-48A0A075B6I7 105 aa10.94□□□□□ -0.66
MCF2L-203ENST00000375604 CHD7Q9P2D1 2997 aa10.92□□□□□ -0.66
MCF2L-203ENST00000375604 PLA2G2DQ9UNK4 145 aa10.92□□□□□ -0.66
MCF2L-203ENST00000375604 A0A1W2PNM2 257 aa10.92□□□□□ -0.66
MCF2L-203ENST00000375604 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-203ENST00000375604 BPTFQ12830 3046 aa10.9□□□□□ -0.66
MCF2L-203ENST00000375604 MIR22HGQ0VDD5 57 aa10.89□□□□□ -0.67
MCF2L-203ENST00000375604 LAMA3Q16787 3333 aa10.89□□□□□ -0.67
MCF2L-203ENST00000375604 PRR26Q8N8Z3 221 aa10.88□□□□□ -0.67
MCF2L-203ENST00000375604 CNBPP62633 177 aaKnown RBP10.88□□□□□ -0.67
MCF2L-203ENST00000375604 LINC00336Q6ZUF6 198 aa10.88□□□□□ -0.67
MCF2L-203ENST00000375604 XIRP2A4UGR9 3374 aa10.88□□□□□ -0.67
MCF2L-203ENST00000375604 RBM12B-AS1Q9P1G2 102 aa10.87□□□□□ -0.67
MCF2L-203ENST00000375604 UQCR11O14957 56 aa10.86□□□□□ -0.67
MCF2L-203ENST00000375604 RPS28P62857 69 aaKnown RBP10.86□□□□□ -0.67
MCF2L-203ENST00000375604 PRRC2CQ9Y520 2896 aaKnown RBP10.85□□□□□ -0.67
MCF2L-203ENST00000375604 F8P00451 2351 aa10.85□□□□□ -0.67
MCF2L-203ENST00000375604 CRIPTQ9P021 101 aa10.79□□□□□ -0.68
MCF2L-203ENST00000375604 HTTP42858 3142 aa10.78□□□□□ -0.68
MCF2L-203ENST00000375604 H7BZZ5 65 aa10.75□□□□□ -0.69
MCF2L-203ENST00000375604 CDH23Q9H251 3354 aa10.75□□□□□ -0.69
MCF2L-203ENST00000375604 Q6ZSA8 131 aa10.74□□□□□ -0.69
MCF2L-203ENST00000375604 M0R2T5 61 aa10.73□□□□□ -0.69
MCF2L-203ENST00000375604 FAM104AQ969W3 186 aa10.73□□□□□ -0.69
MCF2L-203ENST00000375604 IGLV7-46A0A075B6I9 117 aa10.73□□□□□ -0.69
MCF2L-203ENST00000375604 CFAP54Q96N23 3096 aa10.71□□□□□ -0.69
MCF2L-203ENST00000375604 RANBP2P49792 3224 aaKnown RBP10.7□□□□□ -0.7
MCF2L-203ENST00000375604 KLKP1Q107X0 134 aa10.7□□□□□ -0.7
MCF2L-203ENST00000375604 HECTD1Q9ULT8 2610 aa10.7□□□□□ -0.7
MCF2L-203ENST00000375604 UNC80Q8N2C7 3258 aa10.69□□□□□ -0.7
MCF2L-203ENST00000375604 CYP4F30PQ9H0H9 118 aa10.68□□□□□ -0.7
MCF2L-203ENST00000375604 Q8NDZ9 215 aa10.67□□□□□ -0.7
MCF2L-203ENST00000375604 CR1P17927 2039 aa10.67□□□□□ -0.7
MCF2L-203ENST00000375604 PRUNE2Q8WUY3 3088 aa10.66□□□□□ -0.7
MCF2L-203ENST00000375604 DNAH14Q0VDD8 3507 aa10.64□□□□□ -0.71
MCF2L-203ENST00000375604 CELSR3Q9NYQ7 3312 aa10.6□□□□□ -0.71
MCF2L-203ENST00000375604 LAMA2P24043 3122 aaKnown RBP10.6□□□□□ -0.71
MCF2L-203ENST00000375604 CDC42SE1Q9NRR8 79 aa10.58□□□□□ -0.72
MCF2L-203ENST00000375604 EPG5Q9HCE0 2579 aa10.56□□□□□ -0.72
MCF2L-203ENST00000375604 TRIOO75962 3097 aa10.56□□□□□ -0.72
MCF2L-203ENST00000375604 SZT2Q5T011 3432 aa10.56□□□□□ -0.72
MCF2L-203ENST00000375604 KRTAP1-5Q9BYS1 174 aa10.55□□□□□ -0.72
MCF2L-203ENST00000375604 HRES1P13985 223 aa10.55□□□□□ -0.72
MCF2L-203ENST00000375604 CHD9Q3L8U1 2897 aa10.53□□□□□ -0.72
MCF2L-203ENST00000375604 Q8N9P0 234 aaPredicted RBP10.51□□□□□ -0.73
MCF2L-203ENST00000375604 OCR1Q9BZK8 76 aa10.51□□□□□ -0.73
MCF2L-203ENST00000375604 PLAC8Q9NZF1 115 aa10.5□□□□□ -0.73
MCF2L-203ENST00000375604 CAMK2N1Q7Z7J9 78 aa10.49□□□□□ -0.73
MCF2L-203ENST00000375604 A0A0C4DFX4 3053 aa10.49□□□□□ -0.73
MCF2L-203ENST00000375604 KRTAP10-2P60368 255 aa10.49□□□□□ -0.73
MCF2L-203ENST00000375604 USP24Q9UPU5 2620 aa10.49□□□□□ -0.73
MCF2L-203ENST00000375604 Q5VSD8 79 aa10.49□□□□□ -0.73
MCF2L-203ENST00000375604 CD164Q04900 197 aa10.48□□□□□ -0.73
MCF2L-203ENST00000375604 SPANXA2-OT1Q8N9U9 137 aa10.47□□□□□ -0.73
MCF2L-203ENST00000375604 FAM229BQ4G0N7 80 aa10.46□□□□□ -0.74
MCF2L-203ENST00000375604 S4R3F8 94 aa10.45□□□□□ -0.74
MCF2L-203ENST00000375604 KRTAP10-1P60331 282 aa10.44□□□□□ -0.74
MCF2L-203ENST00000375604 FLNAP21333 2647 aaKnown RBP10.44□□□□□ -0.74
MCF2L-203ENST00000375604 MGAM2Q2M2H8 2515 aa10.43□□□□□ -0.74
MCF2L-203ENST00000375604 MMP24-AS1A0A0U1RRL7 71 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms