RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 ACANP16112 2415 aa13.88□□□□□ -0.19
TGFBR1-202ENST00000374994 C8orf17Q9NRJ1 99 aa13.87□□□□□ -0.19
TGFBR1-202ENST00000374994 FAM104AQ969W3 186 aa13.87□□□□□ -0.19
TGFBR1-202ENST00000374994 IGLV5-48A0A075B6I7 105 aa13.85□□□□□ -0.19
TGFBR1-202ENST00000374994 SPANXA2-OT1Q8N9U9 137 aa13.85□□□□□ -0.19
TGFBR1-202ENST00000374994 A0A1W2PNM2 257 aa13.83□□□□□ -0.2
TGFBR1-202ENST00000374994 A0A1B0GVX0 72 aa13.8□□□□□ -0.2
TGFBR1-202ENST00000374994 IGLV5-37A0A075B6J1 123 aa13.78□□□□□ -0.2
TGFBR1-202ENST00000374994 UQCR11O14957 56 aa13.78□□□□□ -0.2
TGFBR1-202ENST00000374994 WIPF1O43516 503 aa13.77□□□□□ -0.21
TGFBR1-202ENST00000374994 OCR1Q9BZK8 76 aa13.75□□□□□ -0.21
TGFBR1-202ENST00000374994 SSBP3-AS1Q7Z2R9 100 aa13.75□□□□□ -0.21
TGFBR1-202ENST00000374994 CD164Q04900 197 aa13.74□□□□□ -0.21
TGFBR1-202ENST00000374994 TYMSOSQ8TAI1 123 aa13.72□□□□□ -0.21
TGFBR1-202ENST00000374994 C9orf163Q8N9P6 203 aa13.71□□□□□ -0.21
TGFBR1-202ENST00000374994 KRTAP10-3P60369 221 aa13.69□□□□□ -0.22
TGFBR1-202ENST00000374994 PRRC2CQ9Y520 2896 aaKnown RBP13.69□□□□□ -0.22
TGFBR1-202ENST00000374994 KRTAP10-11P60412 298 aa13.68□□□□□ -0.22
TGFBR1-202ENST00000374994 CNBPP62633 177 aaKnown RBP13.68□□□□□ -0.22
TGFBR1-202ENST00000374994 ZNF861PO60384 105 aa13.68□□□□□ -0.22
TGFBR1-202ENST00000374994 KTN1-AS1Q86SY8 53 aa13.66□□□□□ -0.22
TGFBR1-202ENST00000374994 Q96NJ1 140 aa13.65□□□□□ -0.22
TGFBR1-202ENST00000374994 Q1T7F1 81 aa13.65□□□□□ -0.22
TGFBR1-202ENST00000374994 SPRR4Q96PI1 79 aa13.64□□□□□ -0.23
TGFBR1-202ENST00000374994 A0A0G2JQZ4 141 aa13.61□□□□□ -0.23
TGFBR1-202ENST00000374994 A0A1W2PNN7 141 aa13.61□□□□□ -0.23
TGFBR1-202ENST00000374994 FASNP49327 2511 aaKnown RBP13.61□□□□□ -0.23
TGFBR1-202ENST00000374994 MIR22HGQ0VDD5 57 aa13.61□□□□□ -0.23
TGFBR1-202ENST00000374994 F8P00451 2351 aa13.61□□□□□ -0.23
TGFBR1-202ENST00000374994 IGLV8-61A0A075B6I0 122 aa13.59□□□□□ -0.23
TGFBR1-202ENST00000374994 KRTAP1-3Q8IUG1 177 aa13.58□□□□□ -0.23
TGFBR1-202ENST00000374994 K7EIL1 84 aa13.58□□□□□ -0.24
TGFBR1-202ENST00000374994 DSCR10P59022 87 aa13.58□□□□□ -0.24
TGFBR1-202ENST00000374994 CDC42SE1Q9NRR8 79 aa13.57□□□□□ -0.24
TGFBR1-202ENST00000374994 EPG5Q9HCE0 2579 aa13.57□□□□□ -0.24
TGFBR1-202ENST00000374994 GOLGB1Q14789 3259 aaKnown RBP13.54□□□□□ -0.24
TGFBR1-202ENST00000374994 LCA10Q71F78 164 aa13.54□□□□□ -0.24
TGFBR1-202ENST00000374994 A0A087WTM6 91 aa13.51□□□□□ -0.25
TGFBR1-202ENST00000374994 PLA2G1BP04054 148 aaKnown RBP13.51□□□□□ -0.25
TGFBR1-202ENST00000374994 CASC10Q5T4H9 136 aa13.51□□□□□ -0.25
TGFBR1-202ENST00000374994 KRTAP1-1Q07627 177 aa13.5□□□□□ -0.25
TGFBR1-202ENST00000374994 Q5XG85 94 aa13.48□□□□□ -0.25
TGFBR1-202ENST00000374994 DNAH12Q6ZR08 3092 aa13.48□□□□□ -0.25
TGFBR1-202ENST00000374994 IGLV7-43P04211 117 aa13.45□□□□□ -0.26
TGFBR1-202ENST00000374994 IGLV7-46A0A075B6I9 117 aa13.44□□□□□ -0.26
TGFBR1-202ENST00000374994 PSORS1C2Q9UIG4 136 aa13.43□□□□□ -0.26
TGFBR1-202ENST00000374994 APLNQ9ULZ1 77 aa13.41□□□□□ -0.26
TGFBR1-202ENST00000374994 SPRR1AP35321 89 aa13.39□□□□□ -0.27
TGFBR1-202ENST00000374994 WWC2-AS2Q96NR7 200 aa13.39□□□□□ -0.27
TGFBR1-202ENST00000374994 CYSTM1Q9H1C7 97 aa13.39□□□□□ -0.27
TGFBR1-202ENST00000374994 LINC00304Q8N9R0 145 aa13.39□□□□□ -0.27
TGFBR1-202ENST00000374994 Q8NDZ9 215 aa13.37□□□□□ -0.27
TGFBR1-202ENST00000374994 Q75L30 129 aa13.36□□□□□ -0.27
TGFBR1-202ENST00000374994 FP248Q71RG6 208 aaPredicted RBP13.36□□□□□ -0.27
TGFBR1-202ENST00000374994 SPINT4Q6UDR6 99 aa13.35□□□□□ -0.27
TGFBR1-202ENST00000374994 ANAPC11Q9NYG5 84 aa13.33□□□□□ -0.28
TGFBR1-202ENST00000374994 BPTFQ12830 3046 aa13.31□□□□□ -0.28
TGFBR1-202ENST00000374994 Q8N9P0 234 aaPredicted RBP13.27□□□□□ -0.28
TGFBR1-202ENST00000374994 LINC01558Q9Y6Z2 57 aa13.27□□□□□ -0.28
TGFBR1-202ENST00000374994 PRR26Q8N8Z3 221 aa13.27□□□□□ -0.29
TGFBR1-202ENST00000374994 MMP24-AS1A0A0U1RRL7 71 aa13.25□□□□□ -0.29
TGFBR1-202ENST00000374994 CEP350Q5VT06 3117 aa13.25□□□□□ -0.29
TGFBR1-202ENST00000374994 SPRR1BP22528 89 aa13.25□□□□□ -0.29
TGFBR1-202ENST00000374994 CRIPTQ9P021 101 aa13.24□□□□□ -0.29
TGFBR1-202ENST00000374994 CHD7Q9P2D1 2997 aa13.23□□□□□ -0.29
TGFBR1-202ENST00000374994 FAM229BQ4G0N7 80 aa13.23□□□□□ -0.29
TGFBR1-202ENST00000374994 FLNAP21333 2647 aaKnown RBP13.22□□□□□ -0.29
TGFBR1-202ENST00000374994 HECTD1Q9ULT8 2610 aa13.2□□□□□ -0.3
TGFBR1-202ENST00000374994 USP24Q9UPU5 2620 aa13.17□□□□□ -0.3
TGFBR1-202ENST00000374994 CR1P17927 2039 aa13.17□□□□□ -0.3
TGFBR1-202ENST00000374994 CHD9Q3L8U1 2897 aa13.16□□□□□ -0.3
TGFBR1-202ENST00000374994 MGAM2Q2M2H8 2515 aa13.16□□□□□ -0.3
TGFBR1-202ENST00000374994 LINC00472Q9H8W2 130 aa13.15□□□□□ -0.3
TGFBR1-202ENST00000374994 HRES1P13985 223 aa13.14□□□□□ -0.31
TGFBR1-202ENST00000374994 OXTP01178 125 aa13.13□□□□□ -0.31
TGFBR1-202ENST00000374994 C9orf92A6NGG3 77 aa13.11□□□□□ -0.31
TGFBR1-202ENST00000374994 Q8N1X5 172 aa13.1□□□□□ -0.31
TGFBR1-202ENST00000374994 FLNBO75369 2602 aaKnown RBP13.1□□□□□ -0.31
TGFBR1-202ENST00000374994 Q5VV11 94 aa13.1□□□□□ -0.31
TGFBR1-202ENST00000374994 KRTAP26-1Q6PEX3 210 aa13.09□□□□□ -0.31
TGFBR1-202ENST00000374994 RBM12B-AS1Q9P1G2 102 aa13.09□□□□□ -0.31
TGFBR1-202ENST00000374994 TNP2Q05952 138 aa13.07□□□□□ -0.32
TGFBR1-202ENST00000374994 ITPR3Q14573 2671 aa13.06□□□□□ -0.32
TGFBR1-202ENST00000374994 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.06□□□□□ -0.32
TGFBR1-202ENST00000374994 ATRQ13535 2644 aa13.04□□□□□ -0.32
TGFBR1-202ENST00000374994 PLAC8Q9NZF1 115 aa13.02□□□□□ -0.33
TGFBR1-202ENST00000374994 A0A1B0GU33 70 aa12.96□□□□□ -0.33
TGFBR1-202ENST00000374994 LINC01554Q52M75 96 aa12.93□□□□□ -0.34
TGFBR1-202ENST00000374994 KRTAP4-16G5E9R7 235 aaPredicted RBP12.91□□□□□ -0.34
TGFBR1-202ENST00000374994 Q5W150 140 aa12.89□□□□□ -0.35
TGFBR1-202ENST00000374994 SMR3BP02814 79 aaPredicted RBP12.88□□□□□ -0.35
TGFBR1-202ENST00000374994 ZCCHC13Q8WW36 166 aaKnown RBP12.88□□□□□ -0.35
TGFBR1-202ENST00000374994 TRANK1O15050 2925 aa12.87□□□□□ -0.35
TGFBR1-202ENST00000374994 A0A0D9SG42 100 aa12.84□□□□□ -0.35
TGFBR1-202ENST00000374994 KRTAP29-1A8MX34 341 aaPredicted RBP12.84□□□□□ -0.35
TGFBR1-202ENST00000374994 SPINK7P58062 85 aa12.84□□□□□ -0.35
TGFBR1-202ENST00000374994 MAST4O15021 2626 aa12.83□□□□□ -0.36
TGFBR1-202ENST00000374994 Q6ZR54 194 aa12.81□□□□□ -0.36
TGFBR1-202ENST00000374994 HTTP42858 3142 aa12.8□□□□□ -0.36
TGFBR1-202ENST00000374994 CENPEQ02224 2701 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms