RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 TRBV10-2A0A0K0K1G8 114 aa11.51□□□□□ -0.57
CDX4-201ENST00000373514 PLA2G2DQ9UNK4 145 aa11.5□□□□□ -0.57
CDX4-201ENST00000373514 SRRM2Q9UQ35 2752 aaKnown RBP11.5□□□□□ -0.57
CDX4-201ENST00000373514 PSMB2P49721 201 aa11.5□□□□□ -0.57
CDX4-201ENST00000373514 C22orf24Q9Y442 160 aa11.5□□□□□ -0.57
CDX4-201ENST00000373514 PCLOQ9Y6V0 5065 aa11.5□□□□□ -0.57
CDX4-201ENST00000373514 FABP2P12104 132 aa11.49□□□□□ -0.57
CDX4-201ENST00000373514 VAMP3Q15836 100 aa11.48□□□□□ -0.57
CDX4-201ENST00000373514 S100A7L2Q5SY68 101 aa11.48□□□□□ -0.57
CDX4-201ENST00000373514 TMEM126AQ9H061 195 aa11.48□□□□□ -0.57
CDX4-201ENST00000373514 M0R378 163 aa11.47□□□□□ -0.57
CDX4-201ENST00000373514 TRIAP1O43715 76 aa11.47□□□□□ -0.57
CDX4-201ENST00000373514 NKAPP1Q8N9T2 125 aa11.46□□□□□ -0.57
CDX4-201ENST00000373514 SMIM11BQ8TCY0 68 aa11.46□□□□□ -0.57
CDX4-201ENST00000373514 PSORS1C2Q9UIG4 136 aa11.46□□□□□ -0.57
CDX4-201ENST00000373514 IGLV5-37A0A075B6J1 123 aa11.45□□□□□ -0.58
CDX4-201ENST00000373514 GAGE10A6NGK3 116 aa11.45□□□□□ -0.58
CDX4-201ENST00000373514 IGLV6-57P01721 117 aa11.45□□□□□ -0.58
CDX4-201ENST00000373514 UBE2BP63146 152 aa11.45□□□□□ -0.58
CDX4-201ENST00000373514 MRPL55Q7Z7F7 128 aaKnown RBP11.45□□□□□ -0.58
CDX4-201ENST00000373514 SCGB1C2P0DMR2 95 aa11.45□□□□□ -0.58
CDX4-201ENST00000373514 RPL28P46779 137 aaKnown RBP11.45□□□□□ -0.58
CDX4-201ENST00000373514 TRBV10-3A0A0K0K1G6 114 aa11.44□□□□□ -0.58
CDX4-201ENST00000373514 INAFM2P0DMQ5 153 aa11.44□□□□□ -0.58
CDX4-201ENST00000373514 SPCS1Q9Y6A9 102 aa11.44□□□□□ -0.58
CDX4-201ENST00000373514 RPL37AP8A6NKH3 93 aa11.43□□□□□ -0.58
CDX4-201ENST00000373514 LYRM7Q5U5X0 104 aa11.43□□□□□ -0.58
CDX4-201ENST00000373514 LINC00167Q96N53 147 aa11.43□□□□□ -0.58
CDX4-201ENST00000373514 PKHD1L1Q86WI1 4243 aa11.42□□□□□ -0.58
CDX4-201ENST00000373514 COX6CP09669 75 aa11.41□□□□□ -0.58
CDX4-201ENST00000373514 C1orf137Q5JT78 98 aa11.41□□□□□ -0.58
CDX4-201ENST00000373514 K7EP34 96 aa11.4□□□□□ -0.58
CDX4-201ENST00000373514 TRAV23DV6A0A075B6W5 121 aa11.39□□□□□ -0.59
CDX4-201ENST00000373514 TCL1BO95988 128 aa11.38□□□□□ -0.59
CDX4-201ENST00000373514 GTF2H5Q6ZYL4 71 aa11.38□□□□□ -0.59
CDX4-201ENST00000373514 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
CDX4-201ENST00000373514 C6orf99Q4VX62 202 aa11.36□□□□□ -0.59
CDX4-201ENST00000373514 CLEC2BQ92478 149 aa11.36□□□□□ -0.59
CDX4-201ENST00000373514 TRBV20-1A0A075B6N2 111 aa11.35□□□□□ -0.59
CDX4-201ENST00000373514 UBE2V1Q13404 147 aa11.35□□□□□ -0.59
CDX4-201ENST00000373514 CBY1Q9Y3M2 126 aa11.35□□□□□ -0.59
CDX4-201ENST00000373514 IGLV1-50A0A075B6I6 118 aa11.34□□□□□ -0.59
CDX4-201ENST00000373514 H0YGX0 51 aa11.33□□□□□ -0.6
CDX4-201ENST00000373514 H3BMG7 143 aa11.33□□□□□ -0.6
CDX4-201ENST00000373514 ZNF73O43830 326 aaPredicted RBP11.33□□□□□ -0.6
CDX4-201ENST00000373514 IGLV7-43P04211 117 aa11.33□□□□□ -0.6
CDX4-201ENST00000373514 ATXN8Q156A1 80 aa11.33□□□□□ -0.6
CDX4-201ENST00000373514 DIRC1Q969H9 104 aa11.33□□□□□ -0.6
CDX4-201ENST00000373514 KCNQ1DNQ9H478 68 aa11.33□□□□□ -0.6
CDX4-201ENST00000373514 LCE2DQ5TA82 110 aaPredicted RBP11.32□□□□□ -0.6
CDX4-201ENST00000373514 LST1O00453 97 aa11.31□□□□□ -0.6
CDX4-201ENST00000373514 FAM218AQ96MZ4 157 aa11.31□□□□□ -0.6
CDX4-201ENST00000373514 PRYO14603 147 aa11.3□□□□□ -0.6
CDX4-201ENST00000373514 MYCBP2O75592 4640 aa11.3□□□□□ -0.6
CDX4-201ENST00000373514 BCE1O60756 84 aa11.28□□□□□ -0.6
CDX4-201ENST00000373514 TRBV7-6A0A0J9YX20 115 aa11.27□□□□□ -0.61
CDX4-201ENST00000373514 COX7BP24311 80 aa11.27□□□□□ -0.61
CDX4-201ENST00000373514 REG3GQ6UW15 175 aa11.27□□□□□ -0.61
CDX4-201ENST00000373514 SPINK6Q6UWN8 80 aa11.26□□□□□ -0.61
CDX4-201ENST00000373514 ELOF1P60002 83 aaKnown RBP11.25□□□□□ -0.61
CDX4-201ENST00000373514 MTURNQ8N3F0 131 aa11.25□□□□□ -0.61
CDX4-201ENST00000373514 TRACP01848 142 aa11.25□□□□□ -0.61
CDX4-201ENST00000373514 SPRR1AP35321 89 aa11.25□□□□□ -0.61
CDX4-201ENST00000373514 PRLHP81277 87 aa11.24□□□□□ -0.61
CDX4-201ENST00000373514 LINC00575Q6W349 94 aa11.24□□□□□ -0.61
CDX4-201ENST00000373514 FAM19A1Q7Z5A9 133 aa11.24□□□□□ -0.61
CDX4-201ENST00000373514 LRP1Q07954 4544 aaKnown RBP11.23□□□□□ -0.61
CDX4-201ENST00000373514 C9JAW5 83 aa11.23□□□□□ -0.61
CDX4-201ENST00000373514 KRTAP4-16G5E9R7 235 aaPredicted RBP11.23□□□□□ -0.61
CDX4-201ENST00000373514 ETDCA0A1B0GVM5 59 aa11.22□□□□□ -0.61
CDX4-201ENST00000373514 KRTAP13-1Q8IUC0 172 aa11.22□□□□□ -0.61
CDX4-201ENST00000373514 PRO0461Q9UI25 63 aa11.22□□□□□ -0.61
CDX4-201ENST00000373514 A0A1B0GX51 115 aa11.21□□□□□ -0.61
CDX4-201ENST00000373514 H0Y9J4 135 aa11.21□□□□□ -0.61
CDX4-201ENST00000373514 ZNF861PO60384 105 aa11.21□□□□□ -0.61
CDX4-201ENST00000373514 UBE2AP49459 152 aa11.21□□□□□ -0.61
CDX4-201ENST00000373514 FAT3Q8TDW7 4589 aa11.21□□□□□ -0.61
CDX4-201ENST00000373514 hADV29S1A0JD25 119 aa11.19□□□□□ -0.62
CDX4-201ENST00000373514 B5MCH6 92 aa11.19□□□□□ -0.62
CDX4-201ENST00000373514 DNAL4O96015 105 aa11.19□□□□□ -0.62
CDX4-201ENST00000373514 F8W1H4 67 aa11.19□□□□□ -0.62
CDX4-201ENST00000373514 SLC25A20O43772 301 aa11.19□□□□□ -0.62
CDX4-201ENST00000373514 SNCGO76070 127 aa11.19□□□□□ -0.62
CDX4-201ENST00000373514 SMCPP49901 116 aaPredicted RBP11.18□□□□□ -0.62
CDX4-201ENST00000373514 Q6ZRX8 168 aa11.18□□□□□ -0.62
CDX4-201ENST00000373514 KRTAP29-1A8MX34 341 aaPredicted RBP11.16□□□□□ -0.62
CDX4-201ENST00000373514 OXTP01178 125 aa11.14□□□□□ -0.63
CDX4-201ENST00000373514 ANKRD29Q8N6D5 301 aa11.14□□□□□ -0.63
CDX4-201ENST00000373514 Q9BRP9 147 aa11.14□□□□□ -0.63
CDX4-201ENST00000373514 H3BT86 120 aa11.13□□□□□ -0.63
CDX4-201ENST00000373514 KRTAP1-4P0C5Y4 121 aa11.13□□□□□ -0.63
CDX4-201ENST00000373514 BAALC-AS2P0C853 105 aa11.13□□□□□ -0.63
CDX4-201ENST00000373514 HIGD2AQ9BW72 106 aa11.13□□□□□ -0.63
CDX4-201ENST00000373514 DHRS4-AS1Q9P1J3 65 aa11.13□□□□□ -0.63
CDX4-201ENST00000373514 ORMDL1Q9P0S3 153 aa11.12□□□□□ -0.63
CDX4-201ENST00000373514 MT1HL1P0DM35 61 aa11.11□□□□□ -0.63
CDX4-201ENST00000373514 Q6ZQY7 126 aa11.11□□□□□ -0.63
CDX4-201ENST00000373514 J3QL48 77 aa11.1□□□□□ -0.63
CDX4-201ENST00000373514 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.1□□□□□ -0.63
CDX4-201ENST00000373514 LINC01600Q96MT4 127 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms