RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 LINC00483Q53H64 154 aa10.33□□□□□ -0.76
GTF3C4-201ENST00000372146 AKAP13Q12802 2813 aa10.33□□□□□ -0.76
GTF3C4-201ENST00000372146 SPANXA2-OT1Q8N9U9 137 aa10.33□□□□□ -0.76
GTF3C4-201ENST00000372146 C8orf17Q9NRJ1 99 aa10.32□□□□□ -0.76
GTF3C4-201ENST00000372146 AVPP01185 164 aa10.32□□□□□ -0.76
GTF3C4-201ENST00000372146 Q6ZRP5 223 aa10.31□□□□□ -0.76
GTF3C4-201ENST00000372146 SMR3AQ99954 134 aa10.31□□□□□ -0.76
GTF3C4-201ENST00000372146 LITAFQ99732 161 aa10.31□□□□□ -0.76
GTF3C4-201ENST00000372146 FAM104AQ969W3 186 aa10.31□□□□□ -0.76
GTF3C4-201ENST00000372146 ANKRD11Q6UB99 2663 aaPredicted RBP10.3□□□□□ -0.76
GTF3C4-201ENST00000372146 A0A1B0GVX0 72 aa10.29□□□□□ -0.76
GTF3C4-201ENST00000372146 IGFL1Q6UW32 110 aa10.29□□□□□ -0.76
GTF3C4-201ENST00000372146 LINC00315P59091 139 aa10.29□□□□□ -0.76
GTF3C4-201ENST00000372146 COX6B2Q6YFQ2 88 aa10.28□□□□□ -0.76
GTF3C4-201ENST00000372146 C9orf92A6NGG3 77 aa10.27□□□□□ -0.77
GTF3C4-201ENST00000372146 PLA2G2DQ9UNK4 145 aa10.27□□□□□ -0.77
GTF3C4-201ENST00000372146 PCNTO95613 3336 aa10.26□□□□□ -0.77
GTF3C4-201ENST00000372146 RTL8CO15255 209 aa10.26□□□□□ -0.77
GTF3C4-201ENST00000372146 GVQW2A0A096LPI5 108 aaPredicted RBP10.25□□□□□ -0.77
GTF3C4-201ENST00000372146 IGLV5-48A0A075B6I7 105 aa10.24□□□□□ -0.77
GTF3C4-201ENST00000372146 ZNF575Q86XF7 245 aa10.23□□□□□ -0.77
GTF3C4-201ENST00000372146 HECTD1Q9ULT8 2610 aa10.22□□□□□ -0.77
GTF3C4-201ENST00000372146 Q75L30 129 aa10.22□□□□□ -0.77
GTF3C4-201ENST00000372146 Q8N1X5 172 aa10.22□□□□□ -0.77
GTF3C4-201ENST00000372146 PRAC1Q96KF2 57 aa10.2□□□□□ -0.78
GTF3C4-201ENST00000372146 C16orf95Q9H693 158 aa10.2□□□□□ -0.78
GTF3C4-201ENST00000372146 CSAG1Q6PB30 78 aa10.2□□□□□ -0.78
GTF3C4-201ENST00000372146 A0A0G2JQZ4 141 aa10.16□□□□□ -0.78
GTF3C4-201ENST00000372146 A0A1W2PNN7 141 aa10.16□□□□□ -0.78
GTF3C4-201ENST00000372146 FAM229BQ4G0N7 80 aa10.16□□□□□ -0.78
GTF3C4-201ENST00000372146 KCNQ1DNQ9H478 68 aa10.16□□□□□ -0.78
GTF3C4-201ENST00000372146 DMAC1Q96GE9 116 aa10.14□□□□□ -0.79
GTF3C4-201ENST00000372146 IGLV5-37A0A075B6J1 123 aa10.14□□□□□ -0.79
GTF3C4-201ENST00000372146 Q8N377 158 aa10.14□□□□□ -0.79
GTF3C4-201ENST00000372146 STAB1Q9NY15 2570 aa10.14□□□□□ -0.79
GTF3C4-201ENST00000372146 IGLV1-50A0A075B6I6 118 aa10.13□□□□□ -0.79
GTF3C4-201ENST00000372146 LINC00528Q8N1L1 170 aa10.13□□□□□ -0.79
GTF3C4-201ENST00000372146 CEP350Q5VT06 3117 aa10.13□□□□□ -0.79
GTF3C4-201ENST00000372146 C9orf163Q8N9P6 203 aa10.13□□□□□ -0.79
GTF3C4-201ENST00000372146 C10orf142B7Z368 130 aa10.13□□□□□ -0.79
GTF3C4-201ENST00000372146 H3BNG1 76 aa10.11□□□□□ -0.79
GTF3C4-201ENST00000372146 BAHCC1Q9P281 2608 aa10.1□□□□□ -0.79
GTF3C4-201ENST00000372146 Q5XG85 94 aa10.1□□□□□ -0.79
GTF3C4-201ENST00000372146 LINC00304Q8N9R0 145 aa10.1□□□□□ -0.79
GTF3C4-201ENST00000372146 A0A1B0GU33 70 aa10.09□□□□□ -0.79
GTF3C4-201ENST00000372146 EIF4EBP3O60516 100 aaPredicted RBP10.08□□□□□ -0.8
GTF3C4-201ENST00000372146 C5orf42Q9H799 3197 aa10.06□□□□□ -0.8
GTF3C4-201ENST00000372146 LINC00588Q9Y4M8 146 aa10.06□□□□□ -0.8
GTF3C4-201ENST00000372146 COL4A2P08572 1712 aa10.06□□□□□ -0.8
GTF3C4-201ENST00000372146 PRR26Q8N8Z3 221 aa10.06□□□□□ -0.8
GTF3C4-201ENST00000372146 NBDYA0A0U1RRE5 68 aa10.05□□□□□ -0.8
GTF3C4-201ENST00000372146 CAMK2N1Q7Z7J9 78 aa10.04□□□□□ -0.8
GTF3C4-201ENST00000372146 OCR1Q9BZK8 76 aa10.03□□□□□ -0.8
GTF3C4-201ENST00000372146 SPINK7P58062 85 aa10.03□□□□□ -0.8
GTF3C4-201ENST00000372146 DNAH10OSP0CZ25 163 aa10.01□□□□□ -0.81
GTF3C4-201ENST00000372146 C15orf56Q8N910 161 aa10.01□□□□□ -0.81
GTF3C4-201ENST00000372146 TLX1NBP0CAT3 122 aa10□□□□□ -0.81
GTF3C4-201ENST00000372146 ANAPC11Q9NYG5 84 aa9.98□□□□□ -0.81
GTF3C4-201ENST00000372146 KRTAP10-9P60411 292 aa9.98□□□□□ -0.81
GTF3C4-201ENST00000372146 ZNF861PO60384 105 aa9.97□□□□□ -0.81
GTF3C4-201ENST00000372146 J3QL48 77 aa9.96□□□□□ -0.81
GTF3C4-201ENST00000372146 IGLV7-46A0A075B6I9 117 aa9.96□□□□□ -0.82
GTF3C4-201ENST00000372146 Q8NAQ8 132 aa9.96□□□□□ -0.82
GTF3C4-201ENST00000372146 LINC01558Q9Y6Z2 57 aa9.96□□□□□ -0.82
GTF3C4-201ENST00000372146 KRTAP16-1A8MUX0 517 aa9.96□□□□□ -0.82
GTF3C4-201ENST00000372146 Q5VV11 94 aa9.95□□□□□ -0.82
GTF3C4-201ENST00000372146 FP248Q71RG6 208 aaPredicted RBP9.95□□□□□ -0.82
GTF3C4-201ENST00000372146 A0A1W2PPR1 153 aa9.94□□□□□ -0.82
GTF3C4-201ENST00000372146 MGAM2Q2M2H8 2515 aa9.94□□□□□ -0.82
GTF3C4-201ENST00000372146 CEP295Q9C0D2 2601 aa9.94□□□□□ -0.82
GTF3C4-201ENST00000372146 Q8N9P0 234 aaPredicted RBP9.91□□□□□ -0.82
GTF3C4-201ENST00000372146 CENPEQ02224 2701 aa9.91□□□□□ -0.82
GTF3C4-201ENST00000372146 NBEAL1Q6ZS30 2694 aa9.88□□□□□ -0.83
GTF3C4-201ENST00000372146 A0A1W2PNM2 257 aa9.87□□□□□ -0.83
GTF3C4-201ENST00000372146 HRES1P13985 223 aa9.85□□□□□ -0.83
GTF3C4-201ENST00000372146 CYSTM1Q9H1C7 97 aa9.85□□□□□ -0.83
GTF3C4-201ENST00000372146 CFAP46Q8IYW2 2715 aa9.84□□□□□ -0.83
GTF3C4-201ENST00000372146 ROMO1P60602 79 aa9.81□□□□□ -0.84
GTF3C4-201ENST00000372146 SPRR4Q96PI1 79 aa9.8□□□□□ -0.84
GTF3C4-201ENST00000372146 ATRQ13535 2644 aa9.8□□□□□ -0.84
GTF3C4-201ENST00000372146 PRR34Q9NV39 138 aa9.77□□□□□ -0.85
GTF3C4-201ENST00000372146 IGLV7-43P04211 117 aa9.76□□□□□ -0.85
GTF3C4-201ENST00000372146 PSORS1C2Q9UIG4 136 aa9.76□□□□□ -0.85
GTF3C4-201ENST00000372146 S4R3F8 94 aa9.76□□□□□ -0.85
GTF3C4-201ENST00000372146 MAST4O15021 2626 aa9.75□□□□□ -0.85
GTF3C4-201ENST00000372146 CNBPP62633 177 aaKnown RBP9.73□□□□□ -0.85
GTF3C4-201ENST00000372146 C19orf73Q9NVV2 129 aa9.73□□□□□ -0.85
GTF3C4-201ENST00000372146 STAB2Q8WWQ8 2551 aa9.71□□□□□ -0.85
GTF3C4-201ENST00000372146 SMR3BP02814 79 aaPredicted RBP9.7□□□□□ -0.86
GTF3C4-201ENST00000372146 H1FX-AS1Q4G0G2 97 aa9.69□□□□□ -0.86
GTF3C4-201ENST00000372146 CFAP54Q96N23 3096 aa9.68□□□□□ -0.86
GTF3C4-201ENST00000372146 NOTCH1P46531 2555 aa9.68□□□□□ -0.86
GTF3C4-201ENST00000372146 Q6ZSA8 131 aa9.68□□□□□ -0.86
GTF3C4-201ENST00000372146 MKI67P46013 3256 aaKnown RBP9.66□□□□□ -0.86
GTF3C4-201ENST00000372146 GIG44P09565 113 aaPredicted RBP9.66□□□□□ -0.86
GTF3C4-201ENST00000372146 LAMA2P24043 3122 aaKnown RBP9.64□□□□□ -0.87
GTF3C4-201ENST00000372146 M0R2T5 61 aa9.64□□□□□ -0.87
GTF3C4-201ENST00000372146 OXTP01178 125 aa9.63□□□□□ -0.87
GTF3C4-201ENST00000372146 NSD1Q96L73 2696 aaPredicted RBP9.63□□□□□ -0.87
GTF3C4-201ENST00000372146 A0A087WTM6 91 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms