RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 C16orf95Q9H693 158 aa10.26□□□□□ -0.77
COL5A1-201ENST00000371817 IGFL1Q6UW32 110 aa10.25□□□□□ -0.77
COL5A1-201ENST00000371817 FAM104AQ969W3 186 aa10.25□□□□□ -0.77
COL5A1-201ENST00000371817 H3BNG1 76 aa10.25□□□□□ -0.77
COL5A1-201ENST00000371817 Q75L30 129 aa10.25□□□□□ -0.77
COL5A1-201ENST00000371817 EP400Q96L91 3159 aa10.24□□□□□ -0.77
COL5A1-201ENST00000371817 CEP295Q9C0D2 2601 aa10.23□□□□□ -0.77
COL5A1-201ENST00000371817 KCNQ1DNQ9H478 68 aa10.23□□□□□ -0.77
COL5A1-201ENST00000371817 A0A0D9SG42 100 aa10.23□□□□□ -0.77
COL5A1-201ENST00000371817 LINC00528Q8N1L1 170 aa10.22□□□□□ -0.77
COL5A1-201ENST00000371817 FAM168BA1KXE4 195 aa10.2□□□□□ -0.78
COL5A1-201ENST00000371817 CSNK1G2-AS1Q8NCQ2 148 aa10.19□□□□□ -0.78
COL5A1-201ENST00000371817 DSCR10P59022 87 aa10.18□□□□□ -0.78
COL5A1-201ENST00000371817 GOLGB1Q14789 3259 aaKnown RBP10.18□□□□□ -0.78
COL5A1-201ENST00000371817 Q8N377 158 aa10.18□□□□□ -0.78
COL5A1-201ENST00000371817 OBSCN-AS1Q96MR7 158 aa10.14□□□□□ -0.79
COL5A1-201ENST00000371817 IGLV1-50A0A075B6I6 118 aa10.14□□□□□ -0.79
COL5A1-201ENST00000371817 Q5XG85 94 aa10.14□□□□□ -0.79
COL5A1-201ENST00000371817 DMAC1Q96GE9 116 aa10.13□□□□□ -0.79
COL5A1-201ENST00000371817 OCR1Q9BZK8 76 aa10.13□□□□□ -0.79
COL5A1-201ENST00000371817 LINC00483Q53H64 154 aa10.13□□□□□ -0.79
COL5A1-201ENST00000371817 EIF4EBP3O60516 100 aaPredicted RBP10.12□□□□□ -0.79
COL5A1-201ENST00000371817 RTL8CO15255 209 aa10.11□□□□□ -0.79
COL5A1-201ENST00000371817 SMR3AQ99954 134 aa10.09□□□□□ -0.79
COL5A1-201ENST00000371817 C9orf163Q8N9P6 203 aa10.08□□□□□ -0.8
COL5A1-201ENST00000371817 DNAH10OSP0CZ25 163 aa10.06□□□□□ -0.8
COL5A1-201ENST00000371817 CSAG1Q6PB30 78 aa10.06□□□□□ -0.8
COL5A1-201ENST00000371817 FAM229BQ4G0N7 80 aa10.06□□□□□ -0.8
COL5A1-201ENST00000371817 IGLV5-48A0A075B6I7 105 aa10.05□□□□□ -0.8
COL5A1-201ENST00000371817 HECTD1Q9ULT8 2610 aa10.05□□□□□ -0.8
COL5A1-201ENST00000371817 C15orf56Q8N910 161 aa10.04□□□□□ -0.8
COL5A1-201ENST00000371817 PRAC1Q96KF2 57 aa10.04□□□□□ -0.8
COL5A1-201ENST00000371817 IGLV7-46A0A075B6I9 117 aa10.03□□□□□ -0.8
COL5A1-201ENST00000371817 PRR26Q8N8Z3 221 aa10.03□□□□□ -0.8
COL5A1-201ENST00000371817 A0A1B0GU33 70 aa10.03□□□□□ -0.8
COL5A1-201ENST00000371817 NBEAL1Q6ZS30 2694 aa10.02□□□□□ -0.8
COL5A1-201ENST00000371817 Q8N1X5 172 aa10.02□□□□□ -0.81
COL5A1-201ENST00000371817 DMBT1Q9UGM3 2413 aaPredicted RBP10.01□□□□□ -0.81
COL5A1-201ENST00000371817 FP248Q71RG6 208 aaPredicted RBP10.01□□□□□ -0.81
COL5A1-201ENST00000371817 CENPEQ02224 2701 aa10□□□□□ -0.81
COL5A1-201ENST00000371817 LINC00588Q9Y4M8 146 aa10□□□□□ -0.81
COL5A1-201ENST00000371817 NBDYA0A0U1RRE5 68 aa9.99□□□□□ -0.81
COL5A1-201ENST00000371817 COX6B2Q6YFQ2 88 aa9.99□□□□□ -0.81
COL5A1-201ENST00000371817 Q8N9P0 234 aaPredicted RBP9.98□□□□□ -0.81
COL5A1-201ENST00000371817 Q8NAQ8 132 aa9.98□□□□□ -0.81
COL5A1-201ENST00000371817 C9orf92A6NGG3 77 aa9.97□□□□□ -0.81
COL5A1-201ENST00000371817 LINC00304Q8N9R0 145 aa9.97□□□□□ -0.81
COL5A1-201ENST00000371817 ZNF861PO60384 105 aa9.97□□□□□ -0.81
COL5A1-201ENST00000371817 A0A0G2JQZ4 141 aa9.97□□□□□ -0.81
COL5A1-201ENST00000371817 A0A1W2PNN7 141 aa9.97□□□□□ -0.81
COL5A1-201ENST00000371817 PLA2G2DQ9UNK4 145 aa9.97□□□□□ -0.81
COL5A1-201ENST00000371817 IGLV5-37A0A075B6J1 123 aa9.97□□□□□ -0.81
COL5A1-201ENST00000371817 LINC01558Q9Y6Z2 57 aa9.96□□□□□ -0.81
COL5A1-201ENST00000371817 ATRQ13535 2644 aa9.95□□□□□ -0.82
COL5A1-201ENST00000371817 Q5VV11 94 aa9.95□□□□□ -0.82
COL5A1-201ENST00000371817 CEP350Q5VT06 3117 aa9.94□□□□□ -0.82
COL5A1-201ENST00000371817 MGAM2Q2M2H8 2515 aa9.94□□□□□ -0.82
COL5A1-201ENST00000371817 A0A1W2PPR1 153 aa9.93□□□□□ -0.82
COL5A1-201ENST00000371817 A0A1W2PNM2 257 aa9.93□□□□□ -0.82
COL5A1-201ENST00000371817 ZNF575Q86XF7 245 aa9.93□□□□□ -0.82
COL5A1-201ENST00000371817 PCNTO95613 3336 aa9.92□□□□□ -0.82
COL5A1-201ENST00000371817 PRR34Q9NV39 138 aa9.9□□□□□ -0.82
COL5A1-201ENST00000371817 KRTAP10-9P60411 292 aa9.9□□□□□ -0.83
COL5A1-201ENST00000371817 TLX1NBP0CAT3 122 aa9.89□□□□□ -0.83
COL5A1-201ENST00000371817 DNAH12Q6ZR08 3092 aa9.89□□□□□ -0.83
COL5A1-201ENST00000371817 MAST4O15021 2626 aa9.89□□□□□ -0.83
COL5A1-201ENST00000371817 CHD6Q8TD26 2715 aa9.88□□□□□ -0.83
COL5A1-201ENST00000371817 CFAP46Q8IYW2 2715 aa9.87□□□□□ -0.83
COL5A1-201ENST00000371817 COL4A2P08572 1712 aa9.87□□□□□ -0.83
COL5A1-201ENST00000371817 KRTAP16-1A8MUX0 517 aa9.87□□□□□ -0.83
COL5A1-201ENST00000371817 CAMK2N1Q7Z7J9 78 aa9.86□□□□□ -0.83
COL5A1-201ENST00000371817 SPINK7P58062 85 aa9.85□□□□□ -0.83
COL5A1-201ENST00000371817 SPRR4Q96PI1 79 aa9.85□□□□□ -0.83
COL5A1-201ENST00000371817 CYSTM1Q9H1C7 97 aa9.84□□□□□ -0.83
COL5A1-201ENST00000371817 STAB1Q9NY15 2570 aa9.81□□□□□ -0.84
COL5A1-201ENST00000371817 CFAP54Q96N23 3096 aa9.81□□□□□ -0.84
COL5A1-201ENST00000371817 HRES1P13985 223 aa9.81□□□□□ -0.84
COL5A1-201ENST00000371817 A0A0C4DFX4 3053 aa9.8□□□□□ -0.84
COL5A1-201ENST00000371817 KLK9Q2XQG4 91 aa9.78□□□□□ -0.84
COL5A1-201ENST00000371817 ASB16-AS1Q495Z4 193 aa9.78□□□□□ -0.84
COL5A1-201ENST00000371817 ANAPC11Q9NYG5 84 aa9.78□□□□□ -0.84
COL5A1-201ENST00000371817 NOTCH1P46531 2555 aa9.76□□□□□ -0.85
COL5A1-201ENST00000371817 UTRNP46939 3433 aa9.74□□□□□ -0.85
COL5A1-201ENST00000371817 ROMO1P60602 79 aa9.73□□□□□ -0.85
COL5A1-201ENST00000371817 ITPR3Q14573 2671 aa9.72□□□□□ -0.85
COL5A1-201ENST00000371817 J3QL48 77 aa9.72□□□□□ -0.85
COL5A1-201ENST00000371817 IGLV7-43P04211 117 aa9.72□□□□□ -0.85
COL5A1-201ENST00000371817 C10orf142B7Z368 130 aa9.72□□□□□ -0.85
COL5A1-201ENST00000371817 CNBPP62633 177 aaKnown RBP9.71□□□□□ -0.85
COL5A1-201ENST00000371817 FLNAP21333 2647 aaKnown RBP9.71□□□□□ -0.86
COL5A1-201ENST00000371817 PSORS1C2Q9UIG4 136 aa9.71□□□□□ -0.86
COL5A1-201ENST00000371817 STAB2Q8WWQ8 2551 aa9.7□□□□□ -0.86
COL5A1-201ENST00000371817 C19orf73Q9NVV2 129 aa9.68□□□□□ -0.86
COL5A1-201ENST00000371817 OXTP01178 125 aa9.68□□□□□ -0.86
COL5A1-201ENST00000371817 LAMA2P24043 3122 aaKnown RBP9.67□□□□□ -0.86
COL5A1-201ENST00000371817 GCN1Q92616 2671 aaKnown RBP9.66□□□□□ -0.86
COL5A1-201ENST00000371817 GIG44P09565 113 aaPredicted RBP9.65□□□□□ -0.87
COL5A1-201ENST00000371817 WWC2-AS2Q96NR7 200 aa9.63□□□□□ -0.87
COL5A1-201ENST00000371817 HELZ2Q9BYK8 2649 aaKnown RBP9.62□□□□□ -0.87
COL5A1-201ENST00000371817 C5orf42Q9H799 3197 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms