RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 PRO0628Q9UI54 55 aa11.48□□□□□ -0.57
CHUK-201ENST00000370397 ATP5EP56381 51 aaPredicted RBP11.48□□□□□ -0.57
CHUK-201ENST00000370397 HIGD2BQ4VC39 106 aa11.48□□□□□ -0.57
CHUK-201ENST00000370397 HIVEP2P31629 2446 aa11.47□□□□□ -0.57
CHUK-201ENST00000370397 BAHCC1Q9P281 2608 aa11.47□□□□□ -0.57
CHUK-201ENST00000370397 Q6ZRP5 223 aa11.47□□□□□ -0.57
CHUK-201ENST00000370397 Q6ZTC4 211 aa11.46□□□□□ -0.57
CHUK-201ENST00000370397 IGLV5-48A0A075B6I7 105 aa11.46□□□□□ -0.58
CHUK-201ENST00000370397 LCE6AA0A183 80 aa11.46□□□□□ -0.58
CHUK-201ENST00000370397 WFDC10BQ8IUB3 73 aa11.46□□□□□ -0.58
CHUK-201ENST00000370397 Q8N377 158 aa11.45□□□□□ -0.58
CHUK-201ENST00000370397 APOC4P55056 127 aa11.45□□□□□ -0.58
CHUK-201ENST00000370397 SPART-AS1P0CW21 52 aa11.44□□□□□ -0.58
CHUK-201ENST00000370397 CAMK2N2Q96S95 79 aa11.43□□□□□ -0.58
CHUK-201ENST00000370397 KCNQ1DNQ9H478 68 aa11.43□□□□□ -0.58
CHUK-201ENST00000370397 DNAH3Q8TD57 4116 aa11.42□□□□□ -0.58
CHUK-201ENST00000370397 TNP2Q05952 138 aa11.42□□□□□ -0.58
CHUK-201ENST00000370397 HTN3P15516 51 aa11.41□□□□□ -0.58
CHUK-201ENST00000370397 KRTAP4-16G5E9R7 235 aaPredicted RBP11.41□□□□□ -0.58
CHUK-201ENST00000370397 PRYO14603 147 aa11.4□□□□□ -0.58
CHUK-201ENST00000370397 C3orf84H3BNL1 204 aa11.39□□□□□ -0.59
CHUK-201ENST00000370397 SERTAD4-AS1Q5TG53 156 aa11.39□□□□□ -0.59
CHUK-201ENST00000370397 A0A1W2PNM2 257 aa11.37□□□□□ -0.59
CHUK-201ENST00000370397 HIGD2AQ9BW72 106 aa11.37□□□□□ -0.59
CHUK-201ENST00000370397 Q9BRP9 147 aa11.36□□□□□ -0.59
CHUK-201ENST00000370397 INAFM1C9JVW0 142 aa11.36□□□□□ -0.59
CHUK-201ENST00000370397 NOTCH2Q04721 2471 aa11.36□□□□□ -0.59
CHUK-201ENST00000370397 KPRPQ5T749 579 aaPredicted RBP11.36□□□□□ -0.59
CHUK-201ENST00000370397 LYSTQ99698 3801 aa11.35□□□□□ -0.59
CHUK-201ENST00000370397 FLNBO75369 2602 aaKnown RBP11.35□□□□□ -0.59
CHUK-201ENST00000370397 H3BNG1 76 aa11.35□□□□□ -0.59
CHUK-201ENST00000370397 KRTAP7-1Q8IUC3 87 aa11.34□□□□□ -0.59
CHUK-201ENST00000370397 C7orf33Q8WU49 177 aa11.34□□□□□ -0.59
CHUK-201ENST00000370397 ZCCHC13Q8WW36 166 aaKnown RBP11.34□□□□□ -0.59
CHUK-201ENST00000370397 NSD1Q96L73 2696 aaPredicted RBP11.33□□□□□ -0.6
CHUK-201ENST00000370397 SMIM29Q86T20 159 aa11.33□□□□□ -0.6
CHUK-201ENST00000370397 TENM3Q9P273 2699 aa11.32□□□□□ -0.6
CHUK-201ENST00000370397 SPRR1AP35321 89 aa11.32□□□□□ -0.6
CHUK-201ENST00000370397 A0A1B0GW54 56 aa11.31□□□□□ -0.6
CHUK-201ENST00000370397 SPRR4Q96PI1 79 aa11.3□□□□□ -0.6
CHUK-201ENST00000370397 DSCR10P59022 87 aa11.3□□□□□ -0.6
CHUK-201ENST00000370397 ESRGQ1W209 222 aa11.3□□□□□ -0.6
CHUK-201ENST00000370397 Q6ZRX8 168 aa11.3□□□□□ -0.6
CHUK-201ENST00000370397 DNAH10Q8IVF4 4471 aa11.3□□□□□ -0.6
CHUK-201ENST00000370397 F8WDY8 70 aa11.29□□□□□ -0.6
CHUK-201ENST00000370397 PLA2G2DQ9UNK4 145 aa11.29□□□□□ -0.6
CHUK-201ENST00000370397 FUSP35637 526 aaKnown RBP eCLIP11.28□□□□□ -0.6
CHUK-201ENST00000370397 TLX1NBP0CAT3 122 aa11.28□□□□□ -0.6
CHUK-201ENST00000370397 DEFB105AQ8NG35 78 aa11.27□□□□□ -0.6
CHUK-201ENST00000370397 TEP1Q99973 2627 aaKnown RBP11.27□□□□□ -0.61
CHUK-201ENST00000370397 IGLV5-37A0A075B6J1 123 aa11.26□□□□□ -0.61
CHUK-201ENST00000370397 hDV103S1A0JD37 113 aa11.26□□□□□ -0.61
CHUK-201ENST00000370397 FAM30AQ9NZY2 134 aa11.26□□□□□ -0.61
CHUK-201ENST00000370397 IGLV1-50A0A075B6I6 118 aa11.26□□□□□ -0.61
CHUK-201ENST00000370397 SYCNQ0VAF6 134 aa11.26□□□□□ -0.61
CHUK-201ENST00000370397 ST20-AS1Q8NBB2 130 aa11.26□□□□□ -0.61
CHUK-201ENST00000370397 Q8NBF4 154 aa11.25□□□□□ -0.61
CHUK-201ENST00000370397 FAM168BA1KXE4 195 aa11.25□□□□□ -0.61
CHUK-201ENST00000370397 LINC01556Q5JQF7 62 aa11.25□□□□□ -0.61
CHUK-201ENST00000370397 DHRS4-AS1Q9P1J3 65 aa11.23□□□□□ -0.61
CHUK-201ENST00000370397 MPLKIPQ8TAP9 179 aa11.23□□□□□ -0.61
CHUK-201ENST00000370397 RETNQ9HD89 108 aa11.23□□□□□ -0.61
CHUK-201ENST00000370397 C1orf137Q5JT78 98 aa11.22□□□□□ -0.61
CHUK-201ENST00000370397 DNAH9Q9NYC9 4486 aa11.22□□□□□ -0.61
CHUK-201ENST00000370397 K7EQZ3 153 aa11.21□□□□□ -0.61
CHUK-201ENST00000370397 C1orf43Q9BWL3 253 aa11.21□□□□□ -0.61
CHUK-201ENST00000370397 F8P00451 2351 aa11.21□□□□□ -0.61
CHUK-201ENST00000370397 NKAPP1Q8N9T2 125 aa11.2□□□□□ -0.62
CHUK-201ENST00000370397 ATRQ13535 2644 aa11.2□□□□□ -0.62
CHUK-201ENST00000370397 RPL37AP8A6NKH3 93 aa11.2□□□□□ -0.62
CHUK-201ENST00000370397 CSMD3Q7Z407 3707 aa11.19□□□□□ -0.62
CHUK-201ENST00000370397 BRK1Q8WUW1 75 aa11.18□□□□□ -0.62
CHUK-201ENST00000370397 C1orf64Q8NEQ6 169 aa11.17□□□□□ -0.62
CHUK-201ENST00000370397 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.17□□□□□ -0.62
CHUK-201ENST00000370397 IGKV2D-24A0A075B6R9 120 aa11.17□□□□□ -0.62
CHUK-201ENST00000370397 CASC10Q5T4H9 136 aa11.16□□□□□ -0.62
CHUK-201ENST00000370397 Q1T7F1 81 aa11.16□□□□□ -0.62
CHUK-201ENST00000370397 DNAH10OSP0CZ25 163 aa11.15□□□□□ -0.62
CHUK-201ENST00000370397 PKIGQ9Y2B9 76 aa11.15□□□□□ -0.62
CHUK-201ENST00000370397 ETDCA0A1B0GVM5 59 aa11.14□□□□□ -0.63
CHUK-201ENST00000370397 KRTAP10-11P60412 298 aa11.14□□□□□ -0.63
CHUK-201ENST00000370397 HUWE1Q7Z6Z7 4374 aaKnown RBP11.13□□□□□ -0.63
CHUK-201ENST00000370397 CYP4F30PQ9H0H9 118 aa11.13□□□□□ -0.63
CHUK-201ENST00000370397 A0A0G2JQZ4 141 aa11.1□□□□□ -0.63
CHUK-201ENST00000370397 A0A1W2PNN7 141 aa11.1□□□□□ -0.63
CHUK-201ENST00000370397 LINC00476Q8WZB0 136 aa11.09□□□□□ -0.63
CHUK-201ENST00000370397 HCG22E2RYF7 251 aa11.08□□□□□ -0.64
CHUK-201ENST00000370397 MRPL55Q7Z7F7 128 aaKnown RBP11.07□□□□□ -0.64
CHUK-201ENST00000370397 IGFL1Q6UW32 110 aa11.07□□□□□ -0.64
CHUK-201ENST00000370397 SRRM2Q9UQ35 2752 aaKnown RBP11.06□□□□□ -0.64
CHUK-201ENST00000370397 LRCOL1A6NCL2 159 aa11.06□□□□□ -0.64
CHUK-201ENST00000370397 IGLV8-61A0A075B6I0 122 aa11.05□□□□□ -0.64
CHUK-201ENST00000370397 PSCAO43653 123 aa11.05□□□□□ -0.64
CHUK-201ENST00000370397 KRTAP29-1A8MX34 341 aaPredicted RBP11.05□□□□□ -0.64
CHUK-201ENST00000370397 MAST4O15021 2626 aa11.04□□□□□ -0.64
CHUK-201ENST00000370397 KRTAP24-1Q3LI83 254 aa11.04□□□□□ -0.64
CHUK-201ENST00000370397 PRR15Q8IV56 129 aa11.04□□□□□ -0.64
CHUK-201ENST00000370397 DNAH7Q8WXX0 4024 aa11.04□□□□□ -0.64
CHUK-201ENST00000370397 DEFB131BA0A096LNP1 70 aa11.03□□□□□ -0.64
CHUK-201ENST00000370397 OXLD1Q5BKU9 147 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms