RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 C19orf73Q9NVV2 129 aa5.65□□□□□ -1.51
ABCA4-201ENST00000370225 MRPL34Q9BQ48 92 aaKnown RBP5.64□□□□□ -1.51
ABCA4-201ENST00000370225 F8P00451 2351 aa5.63□□□□□ -1.51
ABCA4-201ENST00000370225 C9orf129Q5T035 196 aaKnown RBP5.63□□□□□ -1.51
ABCA4-201ENST00000370225 IGFL1Q6UW32 110 aa5.63□□□□□ -1.51
ABCA4-201ENST00000370225 CASC10Q5T4H9 136 aa5.63□□□□□ -1.51
ABCA4-201ENST00000370225 ZNF861PO60384 105 aa5.62□□□□□ -1.51
ABCA4-201ENST00000370225 LCA10Q71F78 164 aa5.62□□□□□ -1.51
ABCA4-201ENST00000370225 KTN1-AS1Q86SY8 53 aa5.61□□□□□ -1.51
ABCA4-201ENST00000370225 C5orf42Q9H799 3197 aa5.61□□□□□ -1.51
ABCA4-201ENST00000370225 LITAFQ99732 161 aa5.61□□□□□ -1.51
ABCA4-201ENST00000370225 A0A096LNT2 108 aa5.6□□□□□ -1.51
ABCA4-201ENST00000370225 GIG44P09565 113 aaPredicted RBP5.6□□□□□ -1.51
ABCA4-201ENST00000370225 IGLV5-37A0A075B6J1 123 aa5.6□□□□□ -1.51
ABCA4-201ENST00000370225 KCNQ1DNQ9H478 68 aa5.6□□□□□ -1.51
ABCA4-201ENST00000370225 LOC101927531A0A1B0GV80 90 aa5.59□□□□□ -1.51
ABCA4-201ENST00000370225 A0A1B0GW54 56 aa5.59□□□□□ -1.51
ABCA4-201ENST00000370225 LINC00528Q8N1L1 170 aa5.59□□□□□ -1.51
ABCA4-201ENST00000370225 LINC01600Q96MT4 127 aa5.59□□□□□ -1.51
ABCA4-201ENST00000370225 PSORS1C2Q9UIG4 136 aa5.59□□□□□ -1.51
ABCA4-201ENST00000370225 IGLV7-43P04211 117 aa5.58□□□□□ -1.52
ABCA4-201ENST00000370225 EIF4EBP3O60516 100 aaPredicted RBP5.58□□□□□ -1.52
ABCA4-201ENST00000370225 PRO0461Q9UI25 63 aa5.58□□□□□ -1.52
ABCA4-201ENST00000370225 H3BPC8 53 aa5.58□□□□□ -1.52
ABCA4-201ENST00000370225 C8orf17Q9NRJ1 99 aa5.57□□□□□ -1.52
ABCA4-201ENST00000370225 COA5Q86WW8 74 aa5.57□□□□□ -1.52
ABCA4-201ENST00000370225 RPS28P62857 69 aaKnown RBP5.56□□□□□ -1.52
ABCA4-201ENST00000370225 KRTAP1-3Q8IUG1 177 aa5.56□□□□□ -1.52
ABCA4-201ENST00000370225 Q8N377 158 aa5.56□□□□□ -1.52
ABCA4-201ENST00000370225 LINC00336Q6ZUF6 198 aa5.56□□□□□ -1.52
ABCA4-201ENST00000370225 PRR34Q9NV39 138 aa5.56□□□□□ -1.52
ABCA4-201ENST00000370225 A0A1B0GVX0 72 aa5.55□□□□□ -1.52
ABCA4-201ENST00000370225 ERC2-IT1O76042 136 aa5.55□□□□□ -1.52
ABCA4-201ENST00000370225 RBM12B-AS1Q9P1G2 102 aa5.55□□□□□ -1.52
ABCA4-201ENST00000370225 C9orf163Q8N9P6 203 aa5.55□□□□□ -1.52
ABCA4-201ENST00000370225 A0A0D9SG42 100 aa5.55□□□□□ -1.52
ABCA4-201ENST00000370225 PRR15Q8IV56 129 aa5.53□□□□□ -1.52
ABCA4-201ENST00000370225 Q8N1X5 172 aa5.53□□□□□ -1.52
ABCA4-201ENST00000370225 TNP2Q05952 138 aa5.53□□□□□ -1.52
ABCA4-201ENST00000370225 KLK9Q2XQG4 91 aa5.53□□□□□ -1.52
ABCA4-201ENST00000370225 BPTFQ12830 3046 aa5.52□□□□□ -1.53
ABCA4-201ENST00000370225 ZNF575Q86XF7 245 aa5.51□□□□□ -1.53
ABCA4-201ENST00000370225 KRTAP1-1Q07627 177 aa5.51□□□□□ -1.53
ABCA4-201ENST00000370225 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
ABCA4-201ENST00000370225 M0R2T5 61 aa5.5□□□□□ -1.53
ABCA4-201ENST00000370225 LUZP6Q538Z0 58 aa5.5□□□□□ -1.53
ABCA4-201ENST00000370225 A8MUN3 132 aa5.5□□□□□ -1.53
ABCA4-201ENST00000370225 SPRR4Q96PI1 79 aa5.5□□□□□ -1.53
ABCA4-201ENST00000370225 PCNTO95613 3336 aa5.5□□□□□ -1.53
ABCA4-201ENST00000370225 PRRC2CQ9Y520 2896 aaKnown RBP5.5□□□□□ -1.53
ABCA4-201ENST00000370225 IGLV5-48A0A075B6I7 105 aa5.5□□□□□ -1.53
ABCA4-201ENST00000370225 CEP350Q5VT06 3117 aa5.49□□□□□ -1.53
ABCA4-201ENST00000370225 HECTD1Q9ULT8 2610 aa5.49□□□□□ -1.53
ABCA4-201ENST00000370225 USP24Q9UPU5 2620 aa5.49□□□□□ -1.53
ABCA4-201ENST00000370225 TLX1NBP0CAT3 122 aa5.48□□□□□ -1.53
ABCA4-201ENST00000370225 LINC00612Q8N6U2 182 aa5.48□□□□□ -1.53
ABCA4-201ENST00000370225 CRIPTQ9P021 101 aa5.48□□□□□ -1.53
ABCA4-201ENST00000370225 UQCR11O14957 56 aa5.47□□□□□ -1.53
ABCA4-201ENST00000370225 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
ABCA4-201ENST00000370225 Q6ZSA8 131 aa5.47□□□□□ -1.53
ABCA4-201ENST00000370225 PRR26Q8N8Z3 221 aa5.47□□□□□ -1.53
ABCA4-201ENST00000370225 EPG5Q9HCE0 2579 aa5.46□□□□□ -1.53
ABCA4-201ENST00000370225 CNBPP62633 177 aaKnown RBP5.46□□□□□ -1.54
ABCA4-201ENST00000370225 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.44□□□□□ -1.54
ABCA4-201ENST00000370225 IGLV7-46A0A075B6I9 117 aa5.44□□□□□ -1.54
ABCA4-201ENST00000370225 CDC42SE1Q9NRR8 79 aa5.43□□□□□ -1.54
ABCA4-201ENST00000370225 FLNBO75369 2602 aaKnown RBP5.42□□□□□ -1.54
ABCA4-201ENST00000370225 MGAM2Q2M2H8 2515 aa5.42□□□□□ -1.54
ABCA4-201ENST00000370225 A0A1W2PNM2 257 aa5.41□□□□□ -1.54
ABCA4-201ENST00000370225 CR1P17927 2039 aa5.4□□□□□ -1.54
ABCA4-201ENST00000370225 FAM104AQ969W3 186 aa5.4□□□□□ -1.55
ABCA4-201ENST00000370225 KRTAP16-1A8MUX0 517 aa5.36□□□□□ -1.55
ABCA4-201ENST00000370225 CYP4F30PQ9H0H9 118 aa5.36□□□□□ -1.55
ABCA4-201ENST00000370225 MKI67P46013 3256 aaKnown RBP5.36□□□□□ -1.55
ABCA4-201ENST00000370225 CAMK2N1Q7Z7J9 78 aa5.35□□□□□ -1.55
ABCA4-201ENST00000370225 FLNAP21333 2647 aaKnown RBP5.34□□□□□ -1.55
ABCA4-201ENST00000370225 ITPR3Q14573 2671 aa5.33□□□□□ -1.56
ABCA4-201ENST00000370225 KLKP1Q107X0 134 aa5.31□□□□□ -1.56
ABCA4-201ENST00000370225 CHD7Q9P2D1 2997 aa5.31□□□□□ -1.56
ABCA4-201ENST00000370225 H7BZZ5 65 aa5.31□□□□□ -1.56
ABCA4-201ENST00000370225 Q5VSD8 79 aa5.31□□□□□ -1.56
ABCA4-201ENST00000370225 BRCA2P51587 3418 aa5.3□□□□□ -1.56
ABCA4-201ENST00000370225 PRAC1Q96KF2 57 aa5.3□□□□□ -1.56
ABCA4-201ENST00000370225 XIRP2A4UGR9 3374 aa5.29□□□□□ -1.56
ABCA4-201ENST00000370225 LAMA3Q16787 3333 aa5.29□□□□□ -1.56
ABCA4-201ENST00000370225 S4R3F8 94 aa5.28□□□□□ -1.56
ABCA4-201ENST00000370225 CFAP54Q96N23 3096 aa5.28□□□□□ -1.56
ABCA4-201ENST00000370225 HELZ2Q9BYK8 2649 aaKnown RBP5.27□□□□□ -1.57
ABCA4-201ENST00000370225 HRES1P13985 223 aa5.27□□□□□ -1.57
ABCA4-201ENST00000370225 PLAC8Q9NZF1 115 aa5.27□□□□□ -1.57
ABCA4-201ENST00000370225 ATRQ13535 2644 aa5.26□□□□□ -1.57
ABCA4-201ENST00000370225 CFAP46Q8IYW2 2715 aa5.26□□□□□ -1.57
ABCA4-201ENST00000370225 MAST4O15021 2626 aa5.24□□□□□ -1.57
ABCA4-201ENST00000370225 SPANXA2-OT1Q8N9U9 137 aa5.24□□□□□ -1.57
ABCA4-201ENST00000370225 ZCCHC13Q8WW36 166 aaKnown RBP5.24□□□□□ -1.57
ABCA4-201ENST00000370225 A0A1B0GU33 70 aa5.23□□□□□ -1.57
ABCA4-201ENST00000370225 KRTAP10-2P60368 255 aa5.23□□□□□ -1.57
ABCA4-201ENST00000370225 KRTAP1-5Q9BYS1 174 aa5.23□□□□□ -1.57
ABCA4-201ENST00000370225 FAM229BQ4G0N7 80 aa5.23□□□□□ -1.57
ABCA4-201ENST00000370225 KRTAP10-1P60331 282 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms