RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 LINC00304Q8N9R0 145 aa11.9□□□□□ -0.5
SMNDC1-201ENST00000369592 ZNF706Q9Y5V0 76 aaPredicted RBP11.9□□□□□ -0.5
SMNDC1-201ENST00000369592 LINC00483Q53H64 154 aa11.89□□□□□ -0.51
SMNDC1-201ENST00000369592 Q9BRP9 147 aa11.89□□□□□ -0.51
SMNDC1-201ENST00000369592 ERC2-IT1O76042 136 aa11.88□□□□□ -0.51
SMNDC1-201ENST00000369592 S100A12P80511 92 aa11.88□□□□□ -0.51
SMNDC1-201ENST00000369592 ANKRD39Q53RE8 183 aa11.88□□□□□ -0.51
SMNDC1-201ENST00000369592 LCE2AQ5TA79 106 aaPredicted RBP11.88□□□□□ -0.51
SMNDC1-201ENST00000369592 Q6ZRX8 168 aa11.88□□□□□ -0.51
SMNDC1-201ENST00000369592 PRR4Q16378 134 aa11.87□□□□□ -0.51
SMNDC1-201ENST00000369592 SPANXCQ9NY87 97 aa11.87□□□□□ -0.51
SMNDC1-201ENST00000369592 S100A7L2Q5SY68 101 aa11.86□□□□□ -0.51
SMNDC1-201ENST00000369592 TRAV23DV6A0A075B6W5 121 aa11.85□□□□□ -0.51
SMNDC1-201ENST00000369592 C20orf202A1L168 122 aa11.85□□□□□ -0.51
SMNDC1-201ENST00000369592 HIST3H2BBQ8N257 126 aa11.84□□□□□ -0.51
SMNDC1-201ENST00000369592 ZNF73O43830 326 aaPredicted RBP11.82□□□□□ -0.52
SMNDC1-201ENST00000369592 ATOH7Q8N100 152 aa11.82□□□□□ -0.52
SMNDC1-201ENST00000369592 HIST1H2BLQ99880 126 aa11.82□□□□□ -0.52
SMNDC1-201ENST00000369592 SPANXDQ9BXN6 97 aa11.82□□□□□ -0.52
SMNDC1-201ENST00000369592 AKR1D1P51857 326 aa11.81□□□□□ -0.52
SMNDC1-201ENST00000369592 PPDPFQ9H3Y8 114 aa11.81□□□□□ -0.52
SMNDC1-201ENST00000369592 SPAG11AQ6PDA7 123 aa11.79□□□□□ -0.52
SMNDC1-201ENST00000369592 PCP2Q8IVA1 136 aa11.79□□□□□ -0.52
SMNDC1-201ENST00000369592 FAT4Q6V0I7 4981 aa11.78□□□□□ -0.52
SMNDC1-201ENST00000369592 GAGE2AQ6NT46 116 aa11.77□□□□□ -0.53
SMNDC1-201ENST00000369592 CBY1Q9Y3M2 126 aa11.77□□□□□ -0.53
SMNDC1-201ENST00000369592 MUC2Q02817 5179 aa11.77□□□□□ -0.53
SMNDC1-201ENST00000369592 SNRPEP62304 92 aaKnown RBP11.76□□□□□ -0.53
SMNDC1-201ENST00000369592 JOSD1Q15040 202 aaPredicted RBP11.76□□□□□ -0.53
SMNDC1-201ENST00000369592 LINC00518Q8N0U6 118 aa11.76□□□□□ -0.53
SMNDC1-201ENST00000369592 RETNLBQ9BQ08 111 aa11.76□□□□□ -0.53
SMNDC1-201ENST00000369592 SCGB1D4Q6XE38 83 aa11.75□□□□□ -0.53
SMNDC1-201ENST00000369592 Q8NBF4 154 aa11.75□□□□□ -0.53
SMNDC1-201ENST00000369592 C5orf52A6NGY3 159 aa11.74□□□□□ -0.53
SMNDC1-201ENST00000369592 IFITM1P13164 125 aa11.74□□□□□ -0.53
SMNDC1-201ENST00000369592 Q6ZVH6 145 aa11.74□□□□□ -0.53
SMNDC1-201ENST00000369592 OR13C6PQ8NH95 151 aa11.73□□□□□ -0.53
SMNDC1-201ENST00000369592 S100A2P29034 98 aa11.71□□□□□ -0.53
SMNDC1-201ENST00000369592 SSBP3-AS1Q7Z2R9 100 aa11.71□□□□□ -0.53
SMNDC1-201ENST00000369592 ST20-AS1Q8NBB2 130 aa11.71□□□□□ -0.53
SMNDC1-201ENST00000369592 SPRR1BP22528 89 aa11.69□□□□□ -0.54
SMNDC1-201ENST00000369592 HINT1P49773 126 aaPredicted RBP11.69□□□□□ -0.54
SMNDC1-201ENST00000369592 ELOF1P60002 83 aaKnown RBP11.69□□□□□ -0.54
SMNDC1-201ENST00000369592 MUSTN1Q8IVN3 82 aa11.69□□□□□ -0.54
SMNDC1-201ENST00000369592 COPS9Q8WXC6 57 aa11.69□□□□□ -0.54
SMNDC1-201ENST00000369592 A0A0U1RQV1 116 aa11.68□□□□□ -0.54
SMNDC1-201ENST00000369592 MOBPQ13875 183 aa11.68□□□□□ -0.54
SMNDC1-201ENST00000369592 SPINK1P00995 79 aa11.67□□□□□ -0.54
SMNDC1-201ENST00000369592 TPRXLQ17RH7 258 aa11.67□□□□□ -0.54
SMNDC1-201ENST00000369592 C6orf99Q4VX62 202 aa11.67□□□□□ -0.54
SMNDC1-201ENST00000369592 DHRS4-AS1Q9P1J3 65 aa11.67□□□□□ -0.54
SMNDC1-201ENST00000369592 IGLV9-49A0A0B4J1Y8 123 aa11.66□□□□□ -0.54
SMNDC1-201ENST00000369592 TRBV7-6A0A0J9YX20 115 aa11.66□□□□□ -0.54
SMNDC1-201ENST00000369592 S100A6P06703 90 aa11.66□□□□□ -0.54
SMNDC1-201ENST00000369592 C4orf48Q5BLP8 95 aa11.66□□□□□ -0.54
SMNDC1-201ENST00000369592 IGLV7-46A0A075B6I9 117 aa11.65□□□□□ -0.54
SMNDC1-201ENST00000369592 RPS29P62273 56 aaKnown RBP11.65□□□□□ -0.54
SMNDC1-201ENST00000369592 COX7BP24311 80 aa11.64□□□□□ -0.55
SMNDC1-201ENST00000369592 FP248Q71RG6 208 aaPredicted RBP11.63□□□□□ -0.55
SMNDC1-201ENST00000369592 SMCPP49901 116 aaPredicted RBP11.61□□□□□ -0.55
SMNDC1-201ENST00000369592 LCE2CQ5TA81 110 aa11.61□□□□□ -0.55
SMNDC1-201ENST00000369592 MUC17Q685J3 4493 aa11.6□□□□□ -0.55
SMNDC1-201ENST00000369592 HSBP1L1C9JCN9 74 aa11.59□□□□□ -0.55
SMNDC1-201ENST00000369592 Q8N377 158 aa11.59□□□□□ -0.55
SMNDC1-201ENST00000369592 A0A1B0GWB2 263 aa11.58□□□□□ -0.56
SMNDC1-201ENST00000369592 A6NDN8 102 aa11.58□□□□□ -0.56
SMNDC1-201ENST00000369592 TRAV13-2A0A0B4J235 113 aa11.57□□□□□ -0.56
SMNDC1-201ENST00000369592 LINC01547P58512 204 aaPredicted RBP11.55□□□□□ -0.56
SMNDC1-201ENST00000369592 C9orf153Q5TBE3 101 aa11.55□□□□□ -0.56
SMNDC1-201ENST00000369592 SMIM11BQ8TCY0 68 aa11.55□□□□□ -0.56
SMNDC1-201ENST00000369592 SCGB1D1O95968 90 aa11.54□□□□□ -0.56
SMNDC1-201ENST00000369592 KRTAP13-3Q3SY46 172 aa11.54□□□□□ -0.56
SMNDC1-201ENST00000369592 IGLV5-48A0A075B6I7 105 aa11.53□□□□□ -0.56
SMNDC1-201ENST00000369592 SLC25A34Q6PIV7 304 aa11.53□□□□□ -0.56
SMNDC1-201ENST00000369592 SMIM29Q86T20 159 aa11.53□□□□□ -0.56
SMNDC1-201ENST00000369592 A4D1N5 150 aa11.52□□□□□ -0.57
SMNDC1-201ENST00000369592 COX8AP10176 69 aa11.52□□□□□ -0.57
SMNDC1-201ENST00000369592 CDIP1Q9H305 208 aa11.52□□□□□ -0.57
SMNDC1-201ENST00000369592 TEX49A0A1B0GTD5 131 aa11.51□□□□□ -0.57
SMNDC1-201ENST00000369592 DLEU1O43261 78 aa11.51□□□□□ -0.57
SMNDC1-201ENST00000369592 SLC25A20O43772 301 aa11.51□□□□□ -0.57
SMNDC1-201ENST00000369592 LAMTOR3Q9UHA4 124 aa11.51□□□□□ -0.57
SMNDC1-201ENST00000369592 TAL2Q16559 108 aa11.48□□□□□ -0.57
SMNDC1-201ENST00000369592 DEFB105AQ8NG35 78 aa11.46□□□□□ -0.57
SMNDC1-201ENST00000369592 Q1RN00 199 aa11.45□□□□□ -0.58
SMNDC1-201ENST00000369592 CD164Q04900 197 aa11.43□□□□□ -0.58
SMNDC1-201ENST00000369592 LINC00575Q6W349 94 aa11.43□□□□□ -0.58
SMNDC1-201ENST00000369592 NHP2Q9NX24 153 aaKnown RBP11.43□□□□□ -0.58
SMNDC1-201ENST00000369592 HIST1H4GQ99525 98 aa11.41□□□□□ -0.58
SMNDC1-201ENST00000369592 HIGD1BQ9P298 99 aa11.41□□□□□ -0.58
SMNDC1-201ENST00000369592 C14orf144Q96I85 54 aa11.4□□□□□ -0.58
SMNDC1-201ENST00000369592 PRO1933Q9H354 126 aa11.4□□□□□ -0.58
SMNDC1-201ENST00000369592 VAMP3Q15836 100 aa11.39□□□□□ -0.59
SMNDC1-201ENST00000369592 SPATA45Q537H7 98 aa11.38□□□□□ -0.59
SMNDC1-201ENST00000369592 Q5XG85 94 aa11.38□□□□□ -0.59
SMNDC1-201ENST00000369592 C2orf91Q6ZV80 131 aa11.38□□□□□ -0.59
SMNDC1-201ENST00000369592 PAM16Q9Y3D7 125 aa11.38□□□□□ -0.59
SMNDC1-201ENST00000369592 HRCT1Q6UXD1 115 aa11.37□□□□□ -0.59
SMNDC1-201ENST00000369592 C12orf57Q99622 126 aa11.37□□□□□ -0.59
SMNDC1-201ENST00000369592 LIMD2Q9BT23 127 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms