RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 Q8NBF4 154 aa4.83□□□□□ -1.64
SPTA1-201ENST00000368147 HECTD1Q9ULT8 2610 aa4.83□□□□□ -1.64
SPTA1-201ENST00000368147 K7EIL1 84 aa4.83□□□□□ -1.64
SPTA1-201ENST00000368147 CDIP1Q9H305 208 aa4.83□□□□□ -1.64
SPTA1-201ENST00000368147 A8MWP4 228 aa4.82□□□□□ -1.64
SPTA1-201ENST00000368147 RBM12B-AS1Q9P1G2 102 aa4.82□□□□□ -1.64
SPTA1-201ENST00000368147 MKI67P46013 3256 aaKnown RBP4.82□□□□□ -1.64
SPTA1-201ENST00000368147 ST20-AS1Q8NBB2 130 aa4.82□□□□□ -1.64
SPTA1-201ENST00000368147 IGLV7-46A0A075B6I9 117 aa4.81□□□□□ -1.64
SPTA1-201ENST00000368147 IGLV7-43P04211 117 aa4.81□□□□□ -1.64
SPTA1-201ENST00000368147 TRBV7-4A0A0J9YYF1 115 aa4.8□□□□□ -1.64
SPTA1-201ENST00000368147 AMELXQ99217 191 aa4.8□□□□□ -1.64
SPTA1-201ENST00000368147 MGAM2Q2M2H8 2515 aa4.8□□□□□ -1.64
SPTA1-201ENST00000368147 KIF25-AS1Q9Y6Z4 181 aa4.79□□□□□ -1.64
SPTA1-201ENST00000368147 MRPL34Q9BQ48 92 aaKnown RBP4.79□□□□□ -1.64
SPTA1-201ENST00000368147 Q8NAQ8 132 aa4.79□□□□□ -1.64
SPTA1-201ENST00000368147 KRTAP10-3P60369 221 aa4.79□□□□□ -1.64
SPTA1-201ENST00000368147 ANAPC11Q9NYG5 84 aa4.79□□□□□ -1.64
SPTA1-201ENST00000368147 CFAP46Q8IYW2 2715 aa4.79□□□□□ -1.64
SPTA1-201ENST00000368147 SPANXA2-OT1Q8N9U9 137 aa4.79□□□□□ -1.64
SPTA1-201ENST00000368147 CEP350Q5VT06 3117 aa4.78□□□□□ -1.64
SPTA1-201ENST00000368147 KLKP1Q107X0 134 aa4.78□□□□□ -1.64
SPTA1-201ENST00000368147 LINC00476Q8WZB0 136 aa4.77□□□□□ -1.65
SPTA1-201ENST00000368147 ATRQ13535 2644 aa4.77□□□□□ -1.65
SPTA1-201ENST00000368147 BRCA2P51587 3418 aa4.76□□□□□ -1.65
SPTA1-201ENST00000368147 LINC00336Q6ZUF6 198 aa4.76□□□□□ -1.65
SPTA1-201ENST00000368147 OBSCN-AS1Q96MR7 158 aa4.76□□□□□ -1.65
SPTA1-201ENST00000368147 IGLV5-45A0A087WSX0 123 aa4.75□□□□□ -1.65
SPTA1-201ENST00000368147 DSCR10P59022 87 aa4.75□□□□□ -1.65
SPTA1-201ENST00000368147 HELZ2Q9BYK8 2649 aaKnown RBP4.75□□□□□ -1.65
SPTA1-201ENST00000368147 WIPF1O43516 503 aa4.75□□□□□ -1.65
SPTA1-201ENST00000368147 LINC00304Q8N9R0 145 aa4.75□□□□□ -1.65
SPTA1-201ENST00000368147 URB1-AS1Q96HZ7 61 aa4.75□□□□□ -1.65
SPTA1-201ENST00000368147 M0R2T5 61 aa4.74□□□□□ -1.65
SPTA1-201ENST00000368147 IGLV6-57P01721 117 aa4.74□□□□□ -1.65
SPTA1-201ENST00000368147 PSORS1C2Q9UIG4 136 aa4.74□□□□□ -1.65
SPTA1-201ENST00000368147 HRES1P13985 223 aa4.74□□□□□ -1.65
SPTA1-201ENST00000368147 Q6ZRX8 168 aa4.73□□□□□ -1.65
SPTA1-201ENST00000368147 FAM104AQ969W3 186 aa4.73□□□□□ -1.65
SPTA1-201ENST00000368147 KRTAP16-1A8MUX0 517 aa4.73□□□□□ -1.65
SPTA1-201ENST00000368147 DNAH14Q0VDD8 3507 aa4.73□□□□□ -1.65
SPTA1-201ENST00000368147 COX8CQ7Z4L0 72 aa4.73□□□□□ -1.65
SPTA1-201ENST00000368147 A0A0D9SG42 100 aa4.72□□□□□ -1.65
SPTA1-201ENST00000368147 C15orf56Q8N910 161 aa4.72□□□□□ -1.65
SPTA1-201ENST00000368147 A0A0G2JQZ4 141 aa4.72□□□□□ -1.65
SPTA1-201ENST00000368147 A0A1W2PNN7 141 aa4.72□□□□□ -1.65
SPTA1-201ENST00000368147 IGLV5-37A0A075B6J1 123 aa4.71□□□□□ -1.66
SPTA1-201ENST00000368147 LINC00528Q8N1L1 170 aa4.7□□□□□ -1.66
SPTA1-201ENST00000368147 IGLV5-48A0A075B6I7 105 aa4.7□□□□□ -1.66
SPTA1-201ENST00000368147 C10orf142B7Z368 130 aa4.7□□□□□ -1.66
SPTA1-201ENST00000368147 H3BNG1 76 aa4.7□□□□□ -1.66
SPTA1-201ENST00000368147 AKAP13Q12802 2813 aa4.7□□□□□ -1.66
SPTA1-201ENST00000368147 K7EQZ3 153 aa4.69□□□□□ -1.66
SPTA1-201ENST00000368147 A0A087WTM6 91 aa4.69□□□□□ -1.66
SPTA1-201ENST00000368147 IGHV3OR16-9A0A0B4J2B5 98 aa4.69□□□□□ -1.66
SPTA1-201ENST00000368147 SZT2Q5T011 3432 aa4.69□□□□□ -1.66
SPTA1-201ENST00000368147 CELSR3Q9NYQ7 3312 aa4.69□□□□□ -1.66
SPTA1-201ENST00000368147 SPINK7P58062 85 aa4.68□□□□□ -1.66
SPTA1-201ENST00000368147 GVQW2A0A096LPI5 108 aaPredicted RBP4.68□□□□□ -1.66
SPTA1-201ENST00000368147 FAM218AQ96MZ4 157 aa4.68□□□□□ -1.66
SPTA1-201ENST00000368147 A0A1B0GVX0 72 aa4.67□□□□□ -1.66
SPTA1-201ENST00000368147 IGLV5-39A0A0G2JS06 123 aa4.67□□□□□ -1.66
SPTA1-201ENST00000368147 H7BZZ5 65 aa4.67□□□□□ -1.66
SPTA1-201ENST00000368147 TLX1NBP0CAT3 122 aa4.67□□□□□ -1.66
SPTA1-201ENST00000368147 PLAC4Q8WY50 150 aa4.67□□□□□ -1.66
SPTA1-201ENST00000368147 CDH23Q9H251 3354 aa4.66□□□□□ -1.66
SPTA1-201ENST00000368147 A0A096LNJ9 63 aa4.66□□□□□ -1.66
SPTA1-201ENST00000368147 SEC61BP60468 96 aaKnown RBP4.66□□□□□ -1.66
SPTA1-201ENST00000368147 DMBT1Q9UGM3 2413 aaPredicted RBP4.66□□□□□ -1.66
SPTA1-201ENST00000368147 LINC00310P59036 64 aa4.66□□□□□ -1.66
SPTA1-201ENST00000368147 ZNF575Q86XF7 245 aa4.66□□□□□ -1.66
SPTA1-201ENST00000368147 Q75L30 129 aa4.66□□□□□ -1.66
SPTA1-201ENST00000368147 ITPR3Q14573 2671 aa4.65□□□□□ -1.66
SPTA1-201ENST00000368147 LINC01546A6NGU7 62 aa4.65□□□□□ -1.66
SPTA1-201ENST00000368147 CASC10Q5T4H9 136 aa4.65□□□□□ -1.66
SPTA1-201ENST00000368147 A0A1B0GU33 70 aa4.65□□□□□ -1.67
SPTA1-201ENST00000368147 SETXQ7Z333 2677 aaKnown RBP4.64□□□□□ -1.67
SPTA1-201ENST00000368147 STAB1Q9NY15 2570 aa4.64□□□□□ -1.67
SPTA1-201ENST00000368147 TNP2Q05952 138 aa4.64□□□□□ -1.67
SPTA1-201ENST00000368147 IGLV1-50A0A075B6I6 118 aa4.64□□□□□ -1.67
SPTA1-201ENST00000368147 C19orf73Q9NVV2 129 aa4.63□□□□□ -1.67
SPTA1-201ENST00000368147 FLNAP21333 2647 aaKnown RBP4.63□□□□□ -1.67
SPTA1-201ENST00000368147 ZNF861PO60384 105 aa4.63□□□□□ -1.67
SPTA1-201ENST00000368147 PRUNE2Q8WUY3 3088 aa4.62□□□□□ -1.67
SPTA1-201ENST00000368147 TEX15Q9BXT5 2789 aa4.61□□□□□ -1.67
SPTA1-201ENST00000368147 LAMA3Q16787 3333 aa4.61□□□□□ -1.67
SPTA1-201ENST00000368147 H1FX-AS1Q4G0G2 97 aa4.61□□□□□ -1.67
SPTA1-201ENST00000368147 PRO0461Q9UI25 63 aa4.61□□□□□ -1.67
SPTA1-201ENST00000368147 CENPEQ02224 2701 aa4.6□□□□□ -1.67
SPTA1-201ENST00000368147 BAHCC1Q9P281 2608 aa4.6□□□□□ -1.67
SPTA1-201ENST00000368147 ASB16-AS1Q495Z4 193 aa4.6□□□□□ -1.67
SPTA1-201ENST00000368147 Q8N1X5 172 aa4.6□□□□□ -1.67
SPTA1-201ENST00000368147 SMCPP49901 116 aaPredicted RBP4.59□□□□□ -1.67
SPTA1-201ENST00000368147 Q6ZSA8 131 aa4.59□□□□□ -1.67
SPTA1-201ENST00000368147 IGFL1Q6UW32 110 aa4.59□□□□□ -1.67
SPTA1-201ENST00000368147 KRTAP1-3Q8IUG1 177 aa4.58□□□□□ -1.68
SPTA1-201ENST00000368147 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
SPTA1-201ENST00000368147 CSAG1Q6PB30 78 aa4.57□□□□□ -1.68
SPTA1-201ENST00000368147 PRR26Q8N8Z3 221 aa4.57□□□□□ -1.68
SPTA1-201ENST00000368147 RANBP2P49792 3224 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms