RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 S100A2P29034 98 aa13.98□□□□□ -0.17
PFDN2-201ENST00000368010 HIST3H2BBQ8N257 126 aa13.98□□□□□ -0.17
PFDN2-201ENST00000368010 LINC00304Q8N9R0 145 aa13.98□□□□□ -0.17
PFDN2-201ENST00000368010 SCGB1D4Q6XE38 83 aa13.97□□□□□ -0.17
PFDN2-201ENST00000368010 PRR4Q16378 134 aa13.96□□□□□ -0.17
PFDN2-201ENST00000368010 CBY1Q9Y3M2 126 aa13.96□□□□□ -0.17
PFDN2-201ENST00000368010 Q6ZRX8 168 aa13.95□□□□□ -0.18
PFDN2-201ENST00000368010 C3orf22Q8N5N4 141 aa13.95□□□□□ -0.18
PFDN2-201ENST00000368010 HIST1H2BLQ99880 126 aa13.95□□□□□ -0.18
PFDN2-201ENST00000368010 ZNF73O43830 326 aaPredicted RBP13.93□□□□□ -0.18
PFDN2-201ENST00000368010 S100A6P06703 90 aa13.93□□□□□ -0.18
PFDN2-201ENST00000368010 SNRPEP62304 92 aaKnown RBP13.92□□□□□ -0.18
PFDN2-201ENST00000368010 OR13C6PQ8NH95 151 aa13.92□□□□□ -0.18
PFDN2-201ENST00000368010 JOSD1Q15040 202 aaPredicted RBP13.91□□□□□ -0.18
PFDN2-201ENST00000368010 Q9BRP9 147 aa13.91□□□□□ -0.18
PFDN2-201ENST00000368010 SPANXDQ9BXN6 97 aa13.91□□□□□ -0.18
PFDN2-201ENST00000368010 PPDPFQ9H3Y8 114 aa13.91□□□□□ -0.18
PFDN2-201ENST00000368010 ERC2-IT1O76042 136 aa13.9□□□□□ -0.18
PFDN2-201ENST00000368010 HINT1P49773 126 aaPredicted RBP13.89□□□□□ -0.19
PFDN2-201ENST00000368010 LINC00483Q53H64 154 aa13.89□□□□□ -0.19
PFDN2-201ENST00000368010 PCP2Q8IVA1 136 aa13.89□□□□□ -0.19
PFDN2-201ENST00000368010 GAGE2AQ6NT46 116 aa13.88□□□□□ -0.19
PFDN2-201ENST00000368010 LINC00518Q8N0U6 118 aa13.88□□□□□ -0.19
PFDN2-201ENST00000368010 COPS9Q8WXC6 57 aa13.88□□□□□ -0.19
PFDN2-201ENST00000368010 KRTAP3-3Q9BYR6 98 aa13.87□□□□□ -0.19
PFDN2-201ENST00000368010 KRTAP3-2Q9BYR7 98 aa13.87□□□□□ -0.19
PFDN2-201ENST00000368010 LPAP08519 4548 aa13.87□□□□□ -0.19
PFDN2-201ENST00000368010 CTAG1AP78358 180 aa13.86□□□□□ -0.19
PFDN2-201ENST00000368010 IFITM1P13164 125 aa13.85□□□□□ -0.19
PFDN2-201ENST00000368010 Q6ZVH6 145 aa13.85□□□□□ -0.19
PFDN2-201ENST00000368010 SPAG11AQ6PDA7 123 aa13.84□□□□□ -0.19
PFDN2-201ENST00000368010 HSBP1L1C9JCN9 74 aa13.83□□□□□ -0.2
PFDN2-201ENST00000368010 C4orf48Q5BLP8 95 aa13.8□□□□□ -0.2
PFDN2-201ENST00000368010 Q8NBF4 154 aa13.8□□□□□ -0.2
PFDN2-201ENST00000368010 RETNLBQ9BQ08 111 aa13.8□□□□□ -0.2
PFDN2-201ENST00000368010 MUSTN1Q8IVN3 82 aa13.79□□□□□ -0.2
PFDN2-201ENST00000368010 IGLV9-49A0A0B4J1Y8 123 aa13.77□□□□□ -0.21
PFDN2-201ENST00000368010 C5orf52A6NGY3 159 aa13.77□□□□□ -0.21
PFDN2-201ENST00000368010 MOBPQ13875 183 aa13.76□□□□□ -0.21
PFDN2-201ENST00000368010 C6orf99Q4VX62 202 aa13.76□□□□□ -0.21
PFDN2-201ENST00000368010 DHRS4-AS1Q9P1J3 65 aa13.76□□□□□ -0.21
PFDN2-201ENST00000368010 RNF213Q63HN8 5207 aa13.75□□□□□ -0.21
PFDN2-201ENST00000368010 ST20-AS1Q8NBB2 130 aa13.75□□□□□ -0.21
PFDN2-201ENST00000368010 A6NDN8 102 aa13.74□□□□□ -0.21
PFDN2-201ENST00000368010 COX7BP24311 80 aa13.74□□□□□ -0.21
PFDN2-201ENST00000368010 ELOF1P60002 83 aaKnown RBP13.74□□□□□ -0.21
PFDN2-201ENST00000368010 SCGB1D1O95968 90 aa13.73□□□□□ -0.21
PFDN2-201ENST00000368010 SSBP3-AS1Q7Z2R9 100 aa13.73□□□□□ -0.21
PFDN2-201ENST00000368010 SPINK1P00995 79 aa13.7□□□□□ -0.22
PFDN2-201ENST00000368010 TRAV13-2A0A0B4J235 113 aa13.68□□□□□ -0.22
PFDN2-201ENST00000368010 TRBV7-6A0A0J9YX20 115 aa13.68□□□□□ -0.22
PFDN2-201ENST00000368010 C9orf153Q5TBE3 101 aa13.68□□□□□ -0.22
PFDN2-201ENST00000368010 IGLV7-46A0A075B6I9 117 aa13.67□□□□□ -0.22
PFDN2-201ENST00000368010 A0A1B0GWB2 263 aa13.66□□□□□ -0.22
PFDN2-201ENST00000368010 SPRR1BP22528 89 aa13.66□□□□□ -0.22
PFDN2-201ENST00000368010 SLC25A34Q6PIV7 304 aa13.65□□□□□ -0.22
PFDN2-201ENST00000368010 TPRXLQ17RH7 258 aa13.62□□□□□ -0.23
PFDN2-201ENST00000368010 RPS29P62273 56 aaKnown RBP13.61□□□□□ -0.23
PFDN2-201ENST00000368010 FP248Q71RG6 208 aaPredicted RBP13.61□□□□□ -0.23
PFDN2-201ENST00000368010 A4D1N5 150 aa13.6□□□□□ -0.23
PFDN2-201ENST00000368010 COX8AP10176 69 aa13.6□□□□□ -0.23
PFDN2-201ENST00000368010 TAL2Q16559 108 aa13.6□□□□□ -0.23
PFDN2-201ENST00000368010 SMIM11BQ8TCY0 68 aa13.6□□□□□ -0.23
PFDN2-201ENST00000368010 LAMTOR3Q9UHA4 124 aa13.59□□□□□ -0.23
PFDN2-201ENST00000368010 CDIP1Q9H305 208 aa13.58□□□□□ -0.24
PFDN2-201ENST00000368010 DEFB105AQ8NG35 78 aa13.57□□□□□ -0.24
PFDN2-201ENST00000368010 TEX49A0A1B0GTD5 131 aa13.55□□□□□ -0.24
PFDN2-201ENST00000368010 DLEU1O43261 78 aa13.55□□□□□ -0.24
PFDN2-201ENST00000368010 HIST1H4GQ99525 98 aa13.55□□□□□ -0.24
PFDN2-201ENST00000368010 NHP2Q9NX24 153 aaKnown RBP13.55□□□□□ -0.24
PFDN2-201ENST00000368010 Q8N377 158 aa13.54□□□□□ -0.24
PFDN2-201ENST00000368010 PAM16Q9Y3D7 125 aa13.53□□□□□ -0.24
PFDN2-201ENST00000368010 SLC25A20O43772 301 aa13.52□□□□□ -0.25
PFDN2-201ENST00000368010 VAMP3Q15836 100 aa13.52□□□□□ -0.25
PFDN2-201ENST00000368010 Q1RN00 199 aa13.52□□□□□ -0.25
PFDN2-201ENST00000368010 IGLV5-48A0A075B6I7 105 aa13.51□□□□□ -0.25
PFDN2-201ENST00000368010 SPATA45Q537H7 98 aa13.51□□□□□ -0.25
PFDN2-201ENST00000368010 C14orf144Q96I85 54 aa13.5□□□□□ -0.25
PFDN2-201ENST00000368010 VAMP8Q9BV40 100 aa13.5□□□□□ -0.25
PFDN2-201ENST00000368010 C12orf57Q99622 126 aa13.49□□□□□ -0.25
PFDN2-201ENST00000368010 LINC01547P58512 204 aaPredicted RBP13.48□□□□□ -0.25
PFDN2-201ENST00000368010 SMIM29Q86T20 159 aa13.46□□□□□ -0.25
PFDN2-201ENST00000368010 PRO1933Q9H354 126 aa13.46□□□□□ -0.25
PFDN2-201ENST00000368010 KRTAP13-3Q3SY46 172 aa13.44□□□□□ -0.26
PFDN2-201ENST00000368010 HRCT1Q6UXD1 115 aa13.44□□□□□ -0.26
PFDN2-201ENST00000368010 LIMD2Q9BT23 127 aa13.44□□□□□ -0.26
PFDN2-201ENST00000368010 HIGD1BQ9P298 99 aa13.44□□□□□ -0.26
PFDN2-201ENST00000368010 LINC00575Q6W349 94 aa13.43□□□□□ -0.26
PFDN2-201ENST00000368010 CD164Q04900 197 aa13.4□□□□□ -0.26
PFDN2-201ENST00000368010 hADV29S1A0JD25 119 aa13.39□□□□□ -0.27
PFDN2-201ENST00000368010 BVES-AS1Q5T3Y7 98 aa13.39□□□□□ -0.27
PFDN2-201ENST00000368010 C2orf91Q6ZV80 131 aa13.39□□□□□ -0.27
PFDN2-201ENST00000368010 MUC2Q02817 5179 aa13.38□□□□□ -0.27
PFDN2-201ENST00000368010 Q6ZQY7 126 aa13.37□□□□□ -0.27
PFDN2-201ENST00000368010 RAB37Q96AX2 223 aa13.37□□□□□ -0.27
PFDN2-201ENST00000368010 H7C2G1 150 aa13.36□□□□□ -0.27
PFDN2-201ENST00000368010 CFC1BP0CG36 223 aa13.36□□□□□ -0.27
PFDN2-201ENST00000368010 CFC1P0CG37 223 aa13.36□□□□□ -0.27
PFDN2-201ENST00000368010 MUC17Q685J3 4493 aa13.36□□□□□ -0.27
PFDN2-201ENST00000368010 A0A0B4J2C4 111 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms