RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 KIF21AQ7Z4S6 1674 aa-1.73□□□□□ -2.69
RNU4-28P-201ENST00000364739 NRXN1Q9ULB1 1477 aa-1.73□□□□□ -2.69
RNU4-28P-201ENST00000364739 ABCA3Q99758 1704 aa-1.73□□□□□ -2.69
RNU4-28P-201ENST00000364739 TFAMQ00059 246 aaKnown RBP-1.73□□□□□ -2.69
RNU4-28P-201ENST00000364739 RPL7L1Q6DKI1 246 aaKnown RBP-1.73□□□□□ -2.69
RNU4-28P-201ENST00000364739 WIZO95785 1651 aa-1.74□□□□□ -2.69
RNU4-28P-201ENST00000364739 LMO7Q8WWI1 1683 aa-1.74□□□□□ -2.69
RNU4-28P-201ENST00000364739 SCAPERQ9BY12 1400 aa-1.74□□□□□ -2.69
RNU4-28P-201ENST00000364739 RGPD8O14715 1765 aaPredicted RBP-1.74□□□□□ -2.69
RNU4-28P-201ENST00000364739 RGPD5Q99666 1765 aa-1.74□□□□□ -2.69
RNU4-28P-201ENST00000364739 C7orf77A4D0Y5 90 aa-1.74□□□□□ -2.69
RNU4-28P-201ENST00000364739 RPL38P63173 70 aaKnown RBP-1.74□□□□□ -2.69
RNU4-28P-201ENST00000364739 SPTSSBQ8NFR3 76 aa-1.74□□□□□ -2.69
RNU4-28P-201ENST00000364739 LCN9Q8WX39 176 aa-1.74□□□□□ -2.69
RNU4-28P-201ENST00000364739 FAIMQ9NVQ4 179 aa-1.74□□□□□ -2.69
RNU4-28P-201ENST00000364739 VPS8Q8N3P4 1428 aa-1.74□□□□□ -2.69
RNU4-28P-201ENST00000364739 UACAQ9BZF9 1416 aa-1.74□□□□□ -2.69
RNU4-28P-201ENST00000364739 RGPD3A6NKT7 1758 aaPredicted RBP-1.75□□□□□ -2.69
RNU4-28P-201ENST00000364739 RGPD4Q7Z3J3 1758 aa-1.75□□□□□ -2.69
RNU4-28P-201ENST00000364739 PLEKHH2Q8IVE3 1493 aa-1.75□□□□□ -2.69
RNU4-28P-201ENST00000364739 TRAV36DV7A0A075B6V5 113 aa-1.75□□□□□ -2.69
RNU4-28P-201ENST00000364739 ARMS2P0C7Q2 107 aa-1.75□□□□□ -2.69
RNU4-28P-201ENST00000364739 RIMS1Q86UR5 1692 aaKnown RBP-1.75□□□□□ -2.69
RNU4-28P-201ENST00000364739 TOPAZ1Q8N9V7 1692 aa-1.75□□□□□ -2.69
RNU4-28P-201ENST00000364739 PDCD11Q14690 1871 aaKnown RBP-1.75□□□□□ -2.69
RNU4-28P-201ENST00000364739 MYH8P13535 1937 aa-1.76□□□□□ -2.69
RNU4-28P-201ENST00000364739 EIF4G3O43432 1585 aaKnown RBP-1.76□□□□□ -2.69
RNU4-28P-201ENST00000364739 HMGN4O00479 90 aa-1.76□□□□□ -2.69
RNU4-28P-201ENST00000364739 TNFSF15O95150 251 aa-1.76□□□□□ -2.69
RNU4-28P-201ENST00000364739 AQP10Q96PS8 301 aa-1.76□□□□□ -2.69
RNU4-28P-201ENST00000364739 LINC01558Q9Y6Z2 57 aa-1.76□□□□□ -2.69
RNU4-28P-201ENST00000364739 UBR3Q6ZT12 1888 aa-1.76□□□□□ -2.69
RNU4-28P-201ENST00000364739 PREX2Q70Z35 1606 aa-1.77□□□□□ -2.69
RNU4-28P-201ENST00000364739 RICTORQ6R327 1708 aa-1.77□□□□□ -2.69
RNU4-28P-201ENST00000364739 LRRIQ1Q96JM4 1722 aa-1.77□□□□□ -2.69
RNU4-28P-201ENST00000364739 DOCK2Q92608 1830 aa-1.77□□□□□ -2.69
RNU4-28P-201ENST00000364739 CDK5RAP2Q96SN8 1893 aa-1.77□□□□□ -2.69
RNU4-28P-201ENST00000364739 SFT2D2O95562 160 aa-1.77□□□□□ -2.69
RNU4-28P-201ENST00000364739 FABP1P07148 127 aa-1.77□□□□□ -2.69
RNU4-28P-201ENST00000364739 HTN1P15515 57 aa-1.77□□□□□ -2.69
RNU4-28P-201ENST00000364739 WHAMMP3Q1A5X7 153 aa-1.77□□□□□ -2.69
RNU4-28P-201ENST00000364739 MAGOHBQ96A72 148 aaKnown RBP-1.77□□□□□ -2.69
RNU4-28P-201ENST00000364739 FAM135AQ9P2D6 1515 aa-1.77□□□□□ -2.69
RNU4-28P-201ENST00000364739 ITSN2Q9NZM3 1697 aa-1.77□□□□□ -2.69
RNU4-28P-201ENST00000364739 ANKRD26Q9UPS8 1709 aa-1.77□□□□□ -2.69
RNU4-28P-201ENST00000364739 TRAV21A0A0B4J279 112 aa-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 IGLC7A0M8Q6 106 aa-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 IFNA17P01571 189 aa-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 RPS27P42677 84 aaKnown RBP-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 PSMG4Q5JS54 123 aa-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 RPS27LQ71UM5 84 aaKnown RBP-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 TCTE3Q8IZS6 198 aa-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 TSLPQ969D9 159 aa-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 HIGD1AQ9Y241 93 aa-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 LENEPQ9Y5L5 61 aa-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 LINC00312Q9Y6C7 94 aa-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 LRRC9Q6ZRR7 1453 aa-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 NEXMIFQ5QGS0 1516 aa-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 NUP188Q5SRE5 1749 aa-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 MON2Q7Z3U7 1717 aa-1.78□□□□□ -2.69
RNU4-28P-201ENST00000364739 CEP152O94986 1710 aa-1.79□□□□□ -2.7
RNU4-28P-201ENST00000364739 TSTD3H0UI37 97 aa-1.79□□□□□ -2.7
RNU4-28P-201ENST00000364739 CHKB-CPT1BH3BT56 60 aa-1.79□□□□□ -2.7
RNU4-28P-201ENST00000364739 C9orf153Q5TBE3 101 aa-1.79□□□□□ -2.7
RNU4-28P-201ENST00000364739 RPRMQ9NS64 109 aa-1.79□□□□□ -2.7
RNU4-28P-201ENST00000364739 AP4S1Q9Y587 144 aa-1.79□□□□□ -2.7
RNU4-28P-201ENST00000364739 BTAF1O14981 1849 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 RNF17Q9BXT8 1623 aaKnown RBP-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 GLI2P10070 1586 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 NWD1Q149M9 1564 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 OOSP1A8MZH6 123 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 SNCGO76070 127 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 LEPROTL1O95214 131 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 S100A8P05109 93 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 SFTA3P0C7M3 94 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 IGLC1P0CG04 106 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 POLR2KP53803 58 aaKnown RBP-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 GNGT1P63211 74 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 SFTA2Q6UW10 78 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 MUSTN1Q8IVN3 82 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 FAM107BQ9H098 131 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 SHPRHQ149N8 1683 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 KIF14Q15058 1648 aa-1.8□□□□□ -2.7
RNU4-28P-201ENST00000364739 KIAA0586Q9BVV6 1533 aa-1.81□□□□□ -2.7
RNU4-28P-201ENST00000364739 A6NIN4 97 aa-1.81□□□□□ -2.7
RNU4-28P-201ENST00000364739 M0R129 80 aa-1.81□□□□□ -2.7
RNU4-28P-201ENST00000364739 SCTP09683 121 aa-1.81□□□□□ -2.7
RNU4-28P-201ENST00000364739 SAA2P0DJI9 122 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-28P-201ENST00000364739 FCER1GP30273 86 aa-1.81□□□□□ -2.7
RNU4-28P-201ENST00000364739 MINOS1Q5TGZ0 78 aa-1.81□□□□□ -2.7
RNU4-28P-201ENST00000364739 SKA2Q8WVK7 121 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-28P-201ENST00000364739 CENPHQ9H3R5 247 aa-1.81□□□□□ -2.7
RNU4-28P-201ENST00000364739 NRAPQ86VF7 1730 aa-1.81□□□□□ -2.7
RNU4-28P-201ENST00000364739 CHD1O14646 1710 aa-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 QSER1Q2KHR3 1735 aa-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 NALCNQ8IZF0 1738 aa-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 MYOM1P52179 1685 aa-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 LOC285095A0A1B0GVY8 99 aa-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 A0A1B0GWA3 101 aa-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 TMEM218A2RU14 115 aa-1.82□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms