RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 A0A0D9SG42 100 aa11.84□□□□□ -0.51
CACNA1A-201ENST00000360228 IGLV5-45A0A087WSX0 123 aa11.83□□□□□ -0.52
CACNA1A-201ENST00000360228 C8orf17Q9NRJ1 99 aa11.83□□□□□ -0.52
CACNA1A-201ENST00000360228 MRPL34Q9BQ48 92 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-201ENST00000360228 KRTAP10-9P60411 292 aa11.82□□□□□ -0.52
CACNA1A-201ENST00000360228 ATRQ13535 2644 aa11.82□□□□□ -0.52
CACNA1A-201ENST00000360228 LINC00315P59091 139 aa11.8□□□□□ -0.52
CACNA1A-201ENST00000360228 C9orf92A6NGG3 77 aa11.8□□□□□ -0.52
CACNA1A-201ENST00000360228 OBSCN-AS1Q96MR7 158 aa11.79□□□□□ -0.52
CACNA1A-201ENST00000360228 Q1T7F1 81 aa11.78□□□□□ -0.52
CACNA1A-201ENST00000360228 FAM168BA1KXE4 195 aa11.78□□□□□ -0.52
CACNA1A-201ENST00000360228 NBEAL1Q6ZS30 2694 aa11.77□□□□□ -0.52
CACNA1A-201ENST00000360228 DSCR10P59022 87 aa11.76□□□□□ -0.53
CACNA1A-201ENST00000360228 SPANXA2-OT1Q8N9U9 137 aa11.73□□□□□ -0.53
CACNA1A-201ENST00000360228 STAB1Q9NY15 2570 aa11.72□□□□□ -0.53
CACNA1A-201ENST00000360228 MGAM2Q2M2H8 2515 aa11.71□□□□□ -0.53
CACNA1A-201ENST00000360228 NBDYA0A0U1RRE5 68 aa11.7□□□□□ -0.54
CACNA1A-201ENST00000360228 CFAP46Q8IYW2 2715 aa11.7□□□□□ -0.54
CACNA1A-201ENST00000360228 DMBT1Q9UGM3 2413 aaPredicted RBP11.69□□□□□ -0.54
CACNA1A-201ENST00000360228 RBM12B-AS1Q9P1G2 102 aa11.68□□□□□ -0.54
CACNA1A-201ENST00000360228 H7BZZ5 65 aa11.68□□□□□ -0.54
CACNA1A-201ENST00000360228 IGLV5-37A0A075B6J1 123 aa11.67□□□□□ -0.54
CACNA1A-201ENST00000360228 GVQW2A0A096LPI5 108 aaPredicted RBP11.67□□□□□ -0.54
CACNA1A-201ENST00000360228 LINC00304Q8N9R0 145 aa11.66□□□□□ -0.54
CACNA1A-201ENST00000360228 H3BNG1 76 aa11.66□□□□□ -0.54
CACNA1A-201ENST00000360228 LINC00588Q9Y4M8 146 aa11.63□□□□□ -0.55
CACNA1A-201ENST00000360228 ZNF575Q86XF7 245 aa11.61□□□□□ -0.55
CACNA1A-201ENST00000360228 A0A1B0GVX0 72 aa11.6□□□□□ -0.55
CACNA1A-201ENST00000360228 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
CACNA1A-201ENST00000360228 GOLGB1Q14789 3259 aaKnown RBP11.59□□□□□ -0.55
CACNA1A-201ENST00000360228 IGLV5-48A0A075B6I7 105 aa11.59□□□□□ -0.55
CACNA1A-201ENST00000360228 DMAC1Q96GE9 116 aa11.59□□□□□ -0.55
CACNA1A-201ENST00000360228 IGFL1Q6UW32 110 aa11.58□□□□□ -0.56
CACNA1A-201ENST00000360228 CAMK2N1Q7Z7J9 78 aa11.53□□□□□ -0.56
CACNA1A-201ENST00000360228 Q8N1X5 172 aa11.53□□□□□ -0.56
CACNA1A-201ENST00000360228 PLA2G2DQ9UNK4 145 aa11.53□□□□□ -0.56
CACNA1A-201ENST00000360228 COL4A2P08572 1712 aa11.52□□□□□ -0.56
CACNA1A-201ENST00000360228 A0A1W2PPR1 153 aa11.52□□□□□ -0.56
CACNA1A-201ENST00000360228 DNAH10OSP0CZ25 163 aa11.52□□□□□ -0.56
CACNA1A-201ENST00000360228 NOTCH1P46531 2555 aa11.49□□□□□ -0.57
CACNA1A-201ENST00000360228 KMT2BQ9UMN6 2715 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-201ENST00000360228 Q8NAQ8 132 aa11.49□□□□□ -0.57
CACNA1A-201ENST00000360228 IGLV1-50A0A075B6I6 118 aa11.48□□□□□ -0.57
CACNA1A-201ENST00000360228 KCNQ1DNQ9H478 68 aa11.47□□□□□ -0.57
CACNA1A-201ENST00000360228 ZNF861PO60384 105 aa11.45□□□□□ -0.58
CACNA1A-201ENST00000360228 A0A0G2JQZ4 141 aa11.44□□□□□ -0.58
CACNA1A-201ENST00000360228 A0A1W2PNN7 141 aa11.44□□□□□ -0.58
CACNA1A-201ENST00000360228 Q75L30 129 aa11.44□□□□□ -0.58
CACNA1A-201ENST00000360228 CHD6Q8TD26 2715 aa11.42□□□□□ -0.58
CACNA1A-201ENST00000360228 EP400Q96L91 3159 aa11.42□□□□□ -0.58
CACNA1A-201ENST00000360228 ANAPC11Q9NYG5 84 aa11.42□□□□□ -0.58
CACNA1A-201ENST00000360228 SMR3BP02814 79 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-201ENST00000360228 FLNBO75369 2602 aaKnown RBP11.4□□□□□ -0.58
CACNA1A-201ENST00000360228 WWC2-AS2Q96NR7 200 aa11.4□□□□□ -0.58
CACNA1A-201ENST00000360228 Q8N377 158 aa11.4□□□□□ -0.58
CACNA1A-201ENST00000360228 LITAFQ99732 161 aa11.39□□□□□ -0.59
CACNA1A-201ENST00000360228 FLNAP21333 2647 aaKnown RBP11.39□□□□□ -0.59
CACNA1A-201ENST00000360228 LINC00528Q8N1L1 170 aa11.38□□□□□ -0.59
CACNA1A-201ENST00000360228 HELZ2Q9BYK8 2649 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-201ENST00000360228 A0A1B0GU33 70 aa11.37□□□□□ -0.59
CACNA1A-201ENST00000360228 CEP350Q5VT06 3117 aa11.36□□□□□ -0.59
CACNA1A-201ENST00000360228 C15orf56Q8N910 161 aa11.35□□□□□ -0.59
CACNA1A-201ENST00000360228 M0R2T5 61 aa11.35□□□□□ -0.59
CACNA1A-201ENST00000360228 ITPR3Q14573 2671 aa11.33□□□□□ -0.6
CACNA1A-201ENST00000360228 DNAH12Q6ZR08 3092 aa11.33□□□□□ -0.6
CACNA1A-201ENST00000360228 STAB2Q8WWQ8 2551 aa11.33□□□□□ -0.6
CACNA1A-201ENST00000360228 BAHCC1Q9P281 2608 aa11.32□□□□□ -0.6
CACNA1A-201ENST00000360228 SPINK7P58062 85 aa11.29□□□□□ -0.6
CACNA1A-201ENST00000360228 CSAG1Q6PB30 78 aa11.29□□□□□ -0.6
CACNA1A-201ENST00000360228 GCN1Q92616 2671 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-201ENST00000360228 C9orf163Q8N9P6 203 aa11.28□□□□□ -0.6
CACNA1A-201ENST00000360228 KRTAP24-1Q3LI83 254 aa11.27□□□□□ -0.61
CACNA1A-201ENST00000360228 KRTAP16-1A8MUX0 517 aa11.27□□□□□ -0.61
CACNA1A-201ENST00000360228 UNC79Q9P2D8 2635 aa11.27□□□□□ -0.61
CACNA1A-201ENST00000360228 UTRNP46939 3433 aa11.27□□□□□ -0.61
CACNA1A-201ENST00000360228 ASB16-AS1Q495Z4 193 aa11.26□□□□□ -0.61
CACNA1A-201ENST00000360228 Q6ZSA8 131 aa11.25□□□□□ -0.61
CACNA1A-201ENST00000360228 IGLV7-43P04211 117 aa11.25□□□□□ -0.61
CACNA1A-201ENST00000360228 COL6A5A8TX70 2615 aa11.23□□□□□ -0.61
CACNA1A-201ENST00000360228 TLX1NBP0CAT3 122 aa11.23□□□□□ -0.61
CACNA1A-201ENST00000360228 PCNTO95613 3336 aa11.23□□□□□ -0.61
CACNA1A-201ENST00000360228 PSORS1C2Q9UIG4 136 aa11.22□□□□□ -0.61
CACNA1A-201ENST00000360228 PRR26Q8N8Z3 221 aa11.22□□□□□ -0.61
CACNA1A-201ENST00000360228 HRES1P13985 223 aa11.2□□□□□ -0.62
CACNA1A-201ENST00000360228 A0A087WTM6 91 aa11.2□□□□□ -0.62
CACNA1A-201ENST00000360228 LINC01558Q9Y6Z2 57 aa11.2□□□□□ -0.62
CACNA1A-201ENST00000360228 IGLV7-46A0A075B6I9 117 aa11.18□□□□□ -0.62
CACNA1A-201ENST00000360228 C5orf42Q9H799 3197 aa11.17□□□□□ -0.62
CACNA1A-201ENST00000360228 EIF4EBP3O60516 100 aaPredicted RBP11.17□□□□□ -0.62
CACNA1A-201ENST00000360228 SPRR4Q96PI1 79 aa11.17□□□□□ -0.62
CACNA1A-201ENST00000360228 OCR1Q9BZK8 76 aa11.16□□□□□ -0.62
CACNA1A-201ENST00000360228 KLK9Q2XQG4 91 aa11.14□□□□□ -0.63
CACNA1A-201ENST00000360228 PRAC1Q96KF2 57 aa11.13□□□□□ -0.63
CACNA1A-201ENST00000360228 KRTAP10-11P60412 298 aa11.12□□□□□ -0.63
CACNA1A-201ENST00000360228 PRR34Q9NV39 138 aa11.11□□□□□ -0.63
CACNA1A-201ENST00000360228 S4R3F8 94 aa11.11□□□□□ -0.63
CACNA1A-201ENST00000360228 TEX15Q9BXT5 2789 aa11.1□□□□□ -0.63
CACNA1A-201ENST00000360228 K7EIL1 84 aa11.07□□□□□ -0.64
CACNA1A-201ENST00000360228 Q8N9P0 234 aaPredicted RBP11.04□□□□□ -0.64
CACNA1A-201ENST00000360228 A0A1W2PNM2 257 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms