RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 RYR2Q92736 4967 aa9.65□□□□□ -0.86
GABPB1-202ENST00000359031 LOC110117498A0A087WWA1 95 aa9.64□□□□□ -0.87
GABPB1-202ENST00000359031 RBM3P98179 157 aaKnown RBP9.64□□□□□ -0.87
GABPB1-202ENST00000359031 LAMTOR3Q9UHA4 124 aa9.64□□□□□ -0.87
GABPB1-202ENST00000359031 TENM2Q9NT68 2774 aa9.64□□□□□ -0.87
GABPB1-202ENST00000359031 NUPR2A6NF83 97 aa9.64□□□□□ -0.87
GABPB1-202ENST00000359031 NDUFV3P56181 108 aaKnown RBP9.64□□□□□ -0.87
GABPB1-202ENST00000359031 LINC00846Q9NV44 126 aa9.64□□□□□ -0.87
GABPB1-202ENST00000359031 PRYO14603 147 aa9.63□□□□□ -0.87
GABPB1-202ENST00000359031 ANAPC13Q9BS18 74 aa9.63□□□□□ -0.87
GABPB1-202ENST00000359031 Q6JHZ5 121 aa9.62□□□□□ -0.87
GABPB1-202ENST00000359031 PSCAO43653 123 aa9.6□□□□□ -0.87
GABPB1-202ENST00000359031 PDE6GP18545 87 aa9.6□□□□□ -0.87
GABPB1-202ENST00000359031 CNBPP62633 177 aaKnown RBP9.6□□□□□ -0.87
GABPB1-202ENST00000359031 Q6ZQT0 140 aa9.6□□□□□ -0.87
GABPB1-202ENST00000359031 DYNC2H1Q8NCM8 4307 aaKnown RBP9.6□□□□□ -0.87
GABPB1-202ENST00000359031 C14orf177Q52M58 125 aa9.6□□□□□ -0.87
GABPB1-202ENST00000359031 STAB2Q8WWQ8 2551 aa9.59□□□□□ -0.87
GABPB1-202ENST00000359031 FAM168BA1KXE4 195 aa9.59□□□□□ -0.87
GABPB1-202ENST00000359031 DSCR8Q96T75 97 aa9.59□□□□□ -0.87
GABPB1-202ENST00000359031 IGLV1-50A0A075B6I6 118 aa9.58□□□□□ -0.88
GABPB1-202ENST00000359031 SPRR1AP35321 89 aa9.57□□□□□ -0.88
GABPB1-202ENST00000359031 ATP5EP2Q5VTU8 51 aa9.56□□□□□ -0.88
GABPB1-202ENST00000359031 MRPL55Q7Z7F7 128 aaKnown RBP9.56□□□□□ -0.88
GABPB1-202ENST00000359031 KRTAP7-1Q8IUC3 87 aa9.56□□□□□ -0.88
GABPB1-202ENST00000359031 DHRS4-AS1Q9P1J3 65 aa9.56□□□□□ -0.88
GABPB1-202ENST00000359031 SACSQ9NZJ4 4579 aa9.56□□□□□ -0.88
GABPB1-202ENST00000359031 FAM19A5Q7Z5A7 132 aaPredicted RBP9.56□□□□□ -0.88
GABPB1-202ENST00000359031 KRTAP4-16G5E9R7 235 aaPredicted RBP9.55□□□□□ -0.88
GABPB1-202ENST00000359031 Q6ZRX8 168 aa9.55□□□□□ -0.88
GABPB1-202ENST00000359031 TRBV7-4A0A0J9YYF1 115 aa9.54□□□□□ -0.88
GABPB1-202ENST00000359031 FAM236AA0A1B0GUQ0 79 aa9.54□□□□□ -0.88
GABPB1-202ENST00000359031 FAM236BA0A1B0GV22 79 aa9.54□□□□□ -0.88
GABPB1-202ENST00000359031 ETDCA0A1B0GVM5 59 aa9.54□□□□□ -0.88
GABPB1-202ENST00000359031 RPL37AP8A6NKH3 93 aa9.54□□□□□ -0.88
GABPB1-202ENST00000359031 C16orf90A8MZG2 172 aa9.54□□□□□ -0.88
GABPB1-202ENST00000359031 NBDYA0A0U1RRE5 68 aa9.53□□□□□ -0.88
GABPB1-202ENST00000359031 B5MCH6 92 aa9.53□□□□□ -0.88
GABPB1-202ENST00000359031 KRTAP17-1Q9BYP8 105 aa9.53□□□□□ -0.88
GABPB1-202ENST00000359031 UBL5Q9BZL1 73 aa9.53□□□□□ -0.88
GABPB1-202ENST00000359031 PKIGQ9Y2B9 76 aa9.53□□□□□ -0.88
GABPB1-202ENST00000359031 A0A096LNI7 61 aa9.52□□□□□ -0.89
GABPB1-202ENST00000359031 IGKV3D-7A0A0C4DH55 119 aa9.52□□□□□ -0.89
GABPB1-202ENST00000359031 HIST1H4AP62805 103 aaKnown RBP9.49□□□□□ -0.89
GABPB1-202ENST00000359031 REG3GQ6UW15 175 aa9.49□□□□□ -0.89
GABPB1-202ENST00000359031 Q9BRP9 147 aa9.49□□□□□ -0.89
GABPB1-202ENST00000359031 LRCOL1A6NCL2 159 aa9.48□□□□□ -0.89
GABPB1-202ENST00000359031 DNAH7Q8WXX0 4024 aa9.47□□□□□ -0.89
GABPB1-202ENST00000359031 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.47□□□□□ -0.89
GABPB1-202ENST00000359031 IGKV2-24A0A0C4DH68 120 aa9.47□□□□□ -0.89
GABPB1-202ENST00000359031 M0R2N4 97 aa9.47□□□□□ -0.89
GABPB1-202ENST00000359031 Q8N377 158 aa9.47□□□□□ -0.89
GABPB1-202ENST00000359031 LINC01547P58512 204 aaPredicted RBP9.46□□□□□ -0.89
GABPB1-202ENST00000359031 Q6ZRN7 208 aaPredicted RBP9.46□□□□□ -0.89
GABPB1-202ENST00000359031 IGLV5-48A0A075B6I7 105 aa9.45□□□□□ -0.9
GABPB1-202ENST00000359031 LYSTQ99698 3801 aa9.45□□□□□ -0.9
GABPB1-202ENST00000359031 Q6ZVQ6 151 aa9.45□□□□□ -0.9
GABPB1-202ENST00000359031 C9orf163Q8N9P6 203 aa9.45□□□□□ -0.9
GABPB1-202ENST00000359031 ATOX1O00244 68 aa9.44□□□□□ -0.9
GABPB1-202ENST00000359031 DEFB105AQ8NG35 78 aa9.44□□□□□ -0.9
GABPB1-202ENST00000359031 A0A1W2PNN7 141 aa9.43□□□□□ -0.9
GABPB1-202ENST00000359031 UBE2BP63146 152 aa9.43□□□□□ -0.9
GABPB1-202ENST00000359031 STARD9Q9P2P6 4700 aa9.43□□□□□ -0.9
GABPB1-202ENST00000359031 CCDC179H3BU77 68 aa9.42□□□□□ -0.9
GABPB1-202ENST00000359031 LINC00474Q9P2X8 69 aa9.41□□□□□ -0.9
GABPB1-202ENST00000359031 A0A087WVE0 104 aa9.4□□□□□ -0.9
GABPB1-202ENST00000359031 CXCL6P80162 114 aa9.4□□□□□ -0.9
GABPB1-202ENST00000359031 DNAH10Q8IVF4 4471 aa9.4□□□□□ -0.9
GABPB1-202ENST00000359031 ERC2-IT1O76042 136 aa9.39□□□□□ -0.91
GABPB1-202ENST00000359031 TNP2Q05952 138 aa9.39□□□□□ -0.91
GABPB1-202ENST00000359031 ST20-AS1Q8NBB2 130 aa9.39□□□□□ -0.91
GABPB1-202ENST00000359031 CSMD3Q7Z407 3707 aa9.39□□□□□ -0.91
GABPB1-202ENST00000359031 CHTF8P0CG12 524 aa9.38□□□□□ -0.91
GABPB1-202ENST00000359031 HYDINQ4G0P3 5121 aa9.38□□□□□ -0.91
GABPB1-202ENST00000359031 A0A1B0GW54 56 aa9.38□□□□□ -0.91
GABPB1-202ENST00000359031 FAM19A1Q7Z5A9 133 aa9.38□□□□□ -0.91
GABPB1-202ENST00000359031 PLECQ15149 4684 aaKnown RBP9.37□□□□□ -0.91
GABPB1-202ENST00000359031 HAMPP81172 84 aa9.37□□□□□ -0.91
GABPB1-202ENST00000359031 UQCRQO14949 82 aa9.35□□□□□ -0.91
GABPB1-202ENST00000359031 PHF5AQ7RTV0 110 aaKnown RBP9.35□□□□□ -0.91
GABPB1-202ENST00000359031 C3orf22Q8N5N4 141 aa9.35□□□□□ -0.91
GABPB1-202ENST00000359031 H0Y9J4 135 aa9.34□□□□□ -0.91
GABPB1-202ENST00000359031 LY6G6CO95867 125 aa9.34□□□□□ -0.91
GABPB1-202ENST00000359031 FUSP35637 526 aaKnown RBP eCLIP9.34□□□□□ -0.91
GABPB1-202ENST00000359031 VPS13DQ5THJ4 4388 aa9.34□□□□□ -0.91
GABPB1-202ENST00000359031 A0A087WTM6 91 aa9.34□□□□□ -0.91
GABPB1-202ENST00000359031 COX7CP15954 63 aa9.34□□□□□ -0.91
GABPB1-202ENST00000359031 PRLHP81277 87 aa9.34□□□□□ -0.91
GABPB1-202ENST00000359031 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
GABPB1-202ENST00000359031 Q6ZR54 194 aa9.33□□□□□ -0.92
GABPB1-202ENST00000359031 LINC00476Q8WZB0 136 aa9.33□□□□□ -0.92
GABPB1-202ENST00000359031 F8WEM9 126 aa9.31□□□□□ -0.92
GABPB1-202ENST00000359031 SMIM29Q86T20 159 aa9.31□□□□□ -0.92
GABPB1-202ENST00000359031 Q8NBF4 154 aa9.31□□□□□ -0.92
GABPB1-202ENST00000359031 SERP2Q8N6R1 65 aa9.31□□□□□ -0.92
GABPB1-202ENST00000359031 SPACA4Q8TDM5 124 aa9.31□□□□□ -0.92
GABPB1-202ENST00000359031 A0A1W2PNM2 257 aa9.3□□□□□ -0.92
GABPB1-202ENST00000359031 NREPQ16612 68 aa9.3□□□□□ -0.92
GABPB1-202ENST00000359031 KRTAP11-1Q8IUC1 163 aa9.3□□□□□ -0.92
GABPB1-202ENST00000359031 HIGD2AQ9BW72 106 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms