RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 ETDBQ3ZM63 59 aa6.97□□□□□ -1.29
TRAPPC4-201ENST00000359005 C6orf99Q4VX62 202 aa6.97□□□□□ -1.29
TRAPPC4-201ENST00000359005 C1orf134Q5TEV5 83 aa6.97□□□□□ -1.29
TRAPPC4-201ENST00000359005 FAT1Q14517 4588 aa6.96□□□□□ -1.29
TRAPPC4-201ENST00000359005 C9orf129Q5T035 196 aaKnown RBP6.96□□□□□ -1.3
TRAPPC4-201ENST00000359005 ORMDL1Q9P0S3 153 aa6.96□□□□□ -1.3
TRAPPC4-201ENST00000359005 PRYO14603 147 aa6.95□□□□□ -1.3
TRAPPC4-201ENST00000359005 SLPIP03973 132 aa6.95□□□□□ -1.3
TRAPPC4-201ENST00000359005 BAALC-AS2P0C853 105 aa6.95□□□□□ -1.3
TRAPPC4-201ENST00000359005 COX7BP24311 80 aa6.95□□□□□ -1.3
TRAPPC4-201ENST00000359005 LINC00336Q6ZUF6 198 aa6.95□□□□□ -1.3
TRAPPC4-201ENST00000359005 Q8N814 137 aa6.95□□□□□ -1.3
TRAPPC4-201ENST00000359005 C9orf163Q8N9P6 203 aa6.95□□□□□ -1.3
TRAPPC4-201ENST00000359005 hADV29S1A0JD25 119 aa6.94□□□□□ -1.3
TRAPPC4-201ENST00000359005 LRCOL1A6NCL2 159 aa6.94□□□□□ -1.3
TRAPPC4-201ENST00000359005 TMEM256-PLSCR3K7ERE1 68 aa6.94□□□□□ -1.3
TRAPPC4-201ENST00000359005 INAFM2P0DMQ5 153 aa6.94□□□□□ -1.3
TRAPPC4-201ENST00000359005 Q6ZRN7 208 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC4-201ENST00000359005 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC4-201ENST00000359005 TNP2Q05952 138 aa6.93□□□□□ -1.3
TRAPPC4-201ENST00000359005 C21orf62-AS1Q17RA5 79 aa6.93□□□□□ -1.3
TRAPPC4-201ENST00000359005 LINC00575Q6W349 94 aa6.93□□□□□ -1.3
TRAPPC4-201ENST00000359005 MRPL55Q7Z7F7 128 aaKnown RBP6.93□□□□□ -1.3
TRAPPC4-201ENST00000359005 MTURNQ8N3F0 131 aa6.93□□□□□ -1.3
TRAPPC4-201ENST00000359005 KCNQ1DNQ9H478 68 aa6.93□□□□□ -1.3
TRAPPC4-201ENST00000359005 A0A087WTM6 91 aa6.92□□□□□ -1.3
TRAPPC4-201ENST00000359005 SMCPP49901 116 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC4-201ENST00000359005 ELOF1P60002 83 aaKnown RBP6.92□□□□□ -1.3
TRAPPC4-201ENST00000359005 A0A087WYN8 130 aa6.91□□□□□ -1.3
TRAPPC4-201ENST00000359005 JMJD7-PLA2G4BH0Y9G9 81 aa6.91□□□□□ -1.3
TRAPPC4-201ENST00000359005 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC4-201ENST00000359005 Q8NDZ9 215 aa6.91□□□□□ -1.3
TRAPPC4-201ENST00000359005 C7orf33Q8WU49 177 aa6.91□□□□□ -1.3
TRAPPC4-201ENST00000359005 FAM218AQ96MZ4 157 aa6.91□□□□□ -1.3
TRAPPC4-201ENST00000359005 LINC00167Q96N53 147 aa6.91□□□□□ -1.3
TRAPPC4-201ENST00000359005 DHRS4-AS1Q9P1J3 65 aa6.91□□□□□ -1.3
TRAPPC4-201ENST00000359005 C22orf24Q9Y442 160 aa6.91□□□□□ -1.3
TRAPPC4-201ENST00000359005 IGLV1-50A0A075B6I6 118 aa6.9□□□□□ -1.3
TRAPPC4-201ENST00000359005 ETDCA0A1B0GVM5 59 aa6.9□□□□□ -1.3
TRAPPC4-201ENST00000359005 FAM19A5Q7Z5A7 132 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC4-201ENST00000359005 DPH3Q96FX2 82 aa6.9□□□□□ -1.3
TRAPPC4-201ENST00000359005 KRTAP4-5Q9BYR2 181 aa6.9□□□□□ -1.3
TRAPPC4-201ENST00000359005 A0A096LNI7 61 aa6.89□□□□□ -1.31
TRAPPC4-201ENST00000359005 IGKV2-24A0A0C4DH68 120 aa6.89□□□□□ -1.31
TRAPPC4-201ENST00000359005 SERTAD4-AS1Q5TG53 156 aa6.89□□□□□ -1.31
TRAPPC4-201ENST00000359005 DNAH8Q96JB1 4490 aa6.88□□□□□ -1.31
TRAPPC4-201ENST00000359005 ACYP1P07311 99 aa6.88□□□□□ -1.31
TRAPPC4-201ENST00000359005 VPS25Q9BRG1 176 aa6.88□□□□□ -1.31
TRAPPC4-201ENST00000359005 REG3GQ6UW15 175 aa6.87□□□□□ -1.31
TRAPPC4-201ENST00000359005 IGLV5-52A0A0A0MRZ9 124 aa6.86□□□□□ -1.31
TRAPPC4-201ENST00000359005 PDE6GP18545 87 aa6.86□□□□□ -1.31
TRAPPC4-201ENST00000359005 UBE2BP63146 152 aa6.86□□□□□ -1.31
TRAPPC4-201ENST00000359005 SDIM1Q6ZPB5 146 aa6.86□□□□□ -1.31
TRAPPC4-201ENST00000359005 TEX49A0A1B0GTD5 131 aa6.85□□□□□ -1.31
TRAPPC4-201ENST00000359005 FAM240AA0A1B0GVK7 77 aa6.85□□□□□ -1.31
TRAPPC4-201ENST00000359005 KRTAP10-2P60368 255 aa6.85□□□□□ -1.31
TRAPPC4-201ENST00000359005 Q6ZRX8 168 aa6.85□□□□□ -1.31
TRAPPC4-201ENST00000359005 LINC00528Q8N1L1 170 aa6.85□□□□□ -1.31
TRAPPC4-201ENST00000359005 FAM168BA1KXE4 195 aa6.84□□□□□ -1.31
TRAPPC4-201ENST00000359005 RPL37AP8A6NKH3 93 aa6.84□□□□□ -1.31
TRAPPC4-201ENST00000359005 SPRR1AP35321 89 aa6.84□□□□□ -1.31
TRAPPC4-201ENST00000359005 FUSP35637 526 aaKnown RBP eCLIP6.84□□□□□ -1.31
TRAPPC4-201ENST00000359005 Q6ZQY7 126 aa6.84□□□□□ -1.31
TRAPPC4-201ENST00000359005 LAMTOR3Q9UHA4 124 aa6.84□□□□□ -1.31
TRAPPC4-201ENST00000359005 B5MCH6 92 aa6.82□□□□□ -1.32
TRAPPC4-201ENST00000359005 RBM3P98179 157 aaKnown RBP6.81□□□□□ -1.32
TRAPPC4-201ENST00000359005 SPACA4Q8TDM5 124 aa6.81□□□□□ -1.32
TRAPPC4-201ENST00000359005 A0A1W2PNN7 141 aa6.8□□□□□ -1.32
TRAPPC4-201ENST00000359005 H0Y9J4 135 aa6.8□□□□□ -1.32
TRAPPC4-201ENST00000359005 OBSCN-AS1Q96MR7 158 aa6.8□□□□□ -1.32
TRAPPC4-201ENST00000359005 DSCR8Q96T75 97 aa6.8□□□□□ -1.32
TRAPPC4-201ENST00000359005 KRTAP4-16G5E9R7 235 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC4-201ENST00000359005 FAM19A1Q7Z5A9 133 aa6.79□□□□□ -1.32
TRAPPC4-201ENST00000359005 KRTAP7-1Q8IUC3 87 aa6.78□□□□□ -1.32
TRAPPC4-201ENST00000359005 HERC1Q15751 4861 aa6.77□□□□□ -1.33
TRAPPC4-201ENST00000359005 EPM2AB3EWF7 344 aa6.77□□□□□ -1.33
TRAPPC4-201ENST00000359005 CHTF8P0CG12 524 aa6.77□□□□□ -1.33
TRAPPC4-201ENST00000359005 UBE2AP49459 152 aa6.77□□□□□ -1.33
TRAPPC4-201ENST00000359005 NDUFV3P56181 108 aaKnown RBP6.77□□□□□ -1.33
TRAPPC4-201ENST00000359005 GAGE2AQ6NT46 116 aa6.77□□□□□ -1.33
TRAPPC4-201ENST00000359005 SIGMAR1Q99720 223 aa6.77□□□□□ -1.33
TRAPPC4-201ENST00000359005 LOC110117498A0A087WWA1 95 aa6.76□□□□□ -1.33
TRAPPC4-201ENST00000359005 CCKP06307 115 aa6.76□□□□□ -1.33
TRAPPC4-201ENST00000359005 PHF5AQ7RTV0 110 aaKnown RBP6.76□□□□□ -1.33
TRAPPC4-201ENST00000359005 PLAC8Q9NZF1 115 aa6.76□□□□□ -1.33
TRAPPC4-201ENST00000359005 F8WEM9 126 aa6.75□□□□□ -1.33
TRAPPC4-201ENST00000359005 BCE1O60756 84 aa6.75□□□□□ -1.33
TRAPPC4-201ENST00000359005 CDK2AP2O75956 126 aa6.75□□□□□ -1.33
TRAPPC4-201ENST00000359005 C14orf132Q9NPU4 83 aa6.75□□□□□ -1.33
TRAPPC4-201ENST00000359005 VPS13BQ7Z7G8 4022 aa6.74□□□□□ -1.33
TRAPPC4-201ENST00000359005 IGLV5-48A0A075B6I7 105 aa6.73□□□□□ -1.33
TRAPPC4-201ENST00000359005 A0A1B0GW54 56 aa6.73□□□□□ -1.33
TRAPPC4-201ENST00000359005 DEFB105AQ8NG35 78 aa6.73□□□□□ -1.33
TRAPPC4-201ENST00000359005 Q9BRP9 147 aa6.73□□□□□ -1.33
TRAPPC4-201ENST00000359005 ZNF706Q9Y5V0 76 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC4-201ENST00000359005 MYCBP2O75592 4640 aa6.73□□□□□ -1.33
TRAPPC4-201ENST00000359005 KRTAP10-1P60331 282 aa6.72□□□□□ -1.33
TRAPPC4-201ENST00000359005 HIGD2AQ9BW72 106 aa6.72□□□□□ -1.33
TRAPPC4-201ENST00000359005 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC4-201ENST00000359005 XGP55808 180 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms