RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 COL5A1P20908 1838 aaPredicted RBP5.8□□□□□ -1.48
CTNND1-201ENST00000358694 PRO0461Q9UI25 63 aa5.8□□□□□ -1.48
CTNND1-201ENST00000358694 IGLV7-46A0A075B6I9 117 aa5.8□□□□□ -1.48
CTNND1-201ENST00000358694 TLX1NBP0CAT3 122 aa5.79□□□□□ -1.48
CTNND1-201ENST00000358694 KTN1-AS1Q86SY8 53 aa5.79□□□□□ -1.48
CTNND1-201ENST00000358694 C9orf163Q8N9P6 203 aa5.79□□□□□ -1.48
CTNND1-201ENST00000358694 Q8N377 158 aa5.79□□□□□ -1.48
CTNND1-201ENST00000358694 IGF2RP11717 2491 aa5.79□□□□□ -1.48
CTNND1-201ENST00000358694 LRP4O75096 1905 aa5.79□□□□□ -1.48
CTNND1-201ENST00000358694 TLN2Q9Y4G6 2542 aa5.79□□□□□ -1.48
CTNND1-201ENST00000358694 PRR26Q8N8Z3 221 aa5.79□□□□□ -1.48
CTNND1-201ENST00000358694 ZFYVE26Q68DK2 2539 aa5.78□□□□□ -1.48
CTNND1-201ENST00000358694 SPRR4Q96PI1 79 aa5.78□□□□□ -1.48
CTNND1-201ENST00000358694 PIEZO2Q9H5I5 2752 aa5.78□□□□□ -1.48
CTNND1-201ENST00000358694 ZNF462Q96JM2 2506 aa5.77□□□□□ -1.49
CTNND1-201ENST00000358694 ABCA12Q86UK0 2595 aa5.76□□□□□ -1.49
CTNND1-201ENST00000358694 MUC22E2RYF6 1773 aaPredicted RBP5.76□□□□□ -1.49
CTNND1-201ENST00000358694 LITAFQ99732 161 aa5.76□□□□□ -1.49
CTNND1-201ENST00000358694 HRES1P13985 223 aa5.76□□□□□ -1.49
CTNND1-201ENST00000358694 C19orf73Q9NVV2 129 aa5.74□□□□□ -1.49
CTNND1-201ENST00000358694 LINC00612Q8N6U2 182 aa5.74□□□□□ -1.49
CTNND1-201ENST00000358694 SRCAPQ6ZRS2 3230 aa5.73□□□□□ -1.49
CTNND1-201ENST00000358694 A0A1B0GU33 70 aa5.73□□□□□ -1.49
CTNND1-201ENST00000358694 PLA2G2DQ9UNK4 145 aa5.73□□□□□ -1.49
CTNND1-201ENST00000358694 PIEZO1Q92508 2521 aa5.73□□□□□ -1.49
CTNND1-201ENST00000358694 PRR34Q9NV39 138 aa5.72□□□□□ -1.49
CTNND1-201ENST00000358694 C10orf142B7Z368 130 aa5.72□□□□□ -1.49
CTNND1-201ENST00000358694 KLKP1Q107X0 134 aa5.72□□□□□ -1.49
CTNND1-201ENST00000358694 A0A0A0MQY5 61 aa5.72□□□□□ -1.49
CTNND1-201ENST00000358694 CSAG1Q6PB30 78 aa5.71□□□□□ -1.5
CTNND1-201ENST00000358694 WIPF1O43516 503 aa5.7□□□□□ -1.5
CTNND1-201ENST00000358694 SPANXA2-OT1Q8N9U9 137 aa5.69□□□□□ -1.5
CTNND1-201ENST00000358694 CASC10Q5T4H9 136 aa5.69□□□□□ -1.5
CTNND1-201ENST00000358694 S4R3F8 94 aa5.69□□□□□ -1.5
CTNND1-201ENST00000358694 CPAMD8Q8IZJ3 1885 aa5.69□□□□□ -1.5
CTNND1-201ENST00000358694 CNBPP62633 177 aaKnown RBP5.68□□□□□ -1.5
CTNND1-201ENST00000358694 ACANP16112 2415 aa5.67□□□□□ -1.5
CTNND1-201ENST00000358694 PTPRBP23467 1997 aa5.67□□□□□ -1.5
CTNND1-201ENST00000358694 H7BZZ5 65 aa5.66□□□□□ -1.5
CTNND1-201ENST00000358694 TNP2Q05952 138 aa5.66□□□□□ -1.5
CTNND1-201ENST00000358694 A0A1W2PNM2 257 aa5.66□□□□□ -1.5
CTNND1-201ENST00000358694 R4GN34 69 aa5.65□□□□□ -1.5
CTNND1-201ENST00000358694 KRTAP10-3P60369 221 aa5.64□□□□□ -1.51
CTNND1-201ENST00000358694 EIF4EBP3O60516 100 aaPredicted RBP5.64□□□□□ -1.51
CTNND1-201ENST00000358694 DMAC1Q96GE9 116 aa5.63□□□□□ -1.51
CTNND1-201ENST00000358694 SPINK7P58062 85 aa5.63□□□□□ -1.51
CTNND1-201ENST00000358694 COL27A1Q8IZC6 1860 aaPredicted RBP5.63□□□□□ -1.51
CTNND1-201ENST00000358694 GIG44P09565 113 aaPredicted RBP5.62□□□□□ -1.51
CTNND1-201ENST00000358694 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
CTNND1-201ENST00000358694 PKD1L2Q7Z442 2459 aa5.6□□□□□ -1.51
CTNND1-201ENST00000358694 SEC61BP60468 96 aaKnown RBP5.6□□□□□ -1.51
CTNND1-201ENST00000358694 ZCCHC13Q8WW36 166 aaKnown RBP5.6□□□□□ -1.51
CTNND1-201ENST00000358694 USP9XQ93008 2570 aaPredicted RBP5.59□□□□□ -1.51
CTNND1-201ENST00000358694 COL4A2P08572 1712 aa5.59□□□□□ -1.51
CTNND1-201ENST00000358694 CHD8Q9HCK8 2581 aa5.59□□□□□ -1.51
CTNND1-201ENST00000358694 H1FX-AS1Q4G0G2 97 aa5.59□□□□□ -1.52
CTNND1-201ENST00000358694 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.58□□□□□ -1.52
CTNND1-201ENST00000358694 SETD2Q9BYW2 2564 aaPredicted RBP5.57□□□□□ -1.52
CTNND1-201ENST00000358694 EP400Q96L91 3159 aa5.56□□□□□ -1.52
CTNND1-201ENST00000358694 KLK9Q2XQG4 91 aa5.56□□□□□ -1.52
CTNND1-201ENST00000358694 FAM229BQ4G0N7 80 aa5.55□□□□□ -1.52
CTNND1-201ENST00000358694 M0QZ58 72 aa5.53□□□□□ -1.52
CTNND1-201ENST00000358694 Q5VSD8 79 aa5.53□□□□□ -1.52
CTNND1-201ENST00000358694 Q8N9P0 234 aaPredicted RBP5.52□□□□□ -1.53
CTNND1-201ENST00000358694 Q75L30 129 aa5.51□□□□□ -1.53
CTNND1-201ENST00000358694 PRAC1Q96KF2 57 aa5.51□□□□□ -1.53
CTNND1-201ENST00000358694 OCR1Q9BZK8 76 aa5.49□□□□□ -1.53
CTNND1-201ENST00000358694 H3BS24 57 aa5.49□□□□□ -1.53
CTNND1-201ENST00000358694 MTORP42345 2549 aa5.47□□□□□ -1.53
CTNND1-201ENST00000358694 LINC01558Q9Y6Z2 57 aa5.47□□□□□ -1.53
CTNND1-201ENST00000358694 A0A096LNT2 108 aa5.46□□□□□ -1.54
CTNND1-201ENST00000358694 RPL37P61927 97 aaKnown RBP5.46□□□□□ -1.54
CTNND1-201ENST00000358694 Q5W150 140 aa5.46□□□□□ -1.54
CTNND1-201ENST00000358694 ROMO1P60602 79 aa5.46□□□□□ -1.54
CTNND1-201ENST00000358694 PLAC8Q9NZF1 115 aa5.46□□□□□ -1.54
CTNND1-201ENST00000358694 MMP24-AS1A0A0U1RRL7 71 aa5.45□□□□□ -1.54
CTNND1-201ENST00000358694 USP9YO00507 2555 aaPredicted RBP5.44□□□□□ -1.54
CTNND1-201ENST00000358694 POLQO75417 2590 aa5.44□□□□□ -1.54
CTNND1-201ENST00000358694 ANKRD17O75179 2603 aaKnown RBP5.41□□□□□ -1.54
CTNND1-201ENST00000358694 ADM2Q7Z4H4 148 aa5.41□□□□□ -1.54
CTNND1-201ENST00000358694 FASNP49327 2511 aaKnown RBP5.4□□□□□ -1.55
CTNND1-201ENST00000358694 CR1P17927 2039 aa5.39□□□□□ -1.55
CTNND1-201ENST00000358694 ANKRD11Q6UB99 2663 aaPredicted RBP5.39□□□□□ -1.55
CTNND1-201ENST00000358694 OXTP01178 125 aa5.38□□□□□ -1.55
CTNND1-201ENST00000358694 SPTBN4Q9H254 2564 aa5.37□□□□□ -1.55
CTNND1-201ENST00000358694 FP248Q71RG6 208 aaPredicted RBP5.36□□□□□ -1.55
CTNND1-201ENST00000358694 KRTAP1-3Q8IUG1 177 aa5.36□□□□□ -1.55
CTNND1-201ENST00000358694 GOLGB1Q14789 3259 aaKnown RBP5.36□□□□□ -1.55
CTNND1-201ENST00000358694 KRTAP1-1Q07627 177 aa5.35□□□□□ -1.55
CTNND1-201ENST00000358694 C20orf166-AS1Q96NR2 134 aa5.35□□□□□ -1.55
CTNND1-201ENST00000358694 LCE6AA0A183 80 aa5.34□□□□□ -1.56
CTNND1-201ENST00000358694 SPATA8Q6RVD6 105 aa5.33□□□□□ -1.56
CTNND1-201ENST00000358694 FLG2Q5D862 2391 aaPredicted RBP5.33□□□□□ -1.56
CTNND1-201ENST00000358694 Q5VV11 94 aa5.33□□□□□ -1.56
CTNND1-201ENST00000358694 CEP295Q9C0D2 2601 aa5.32□□□□□ -1.56
CTNND1-201ENST00000358694 MGAM2Q2M2H8 2515 aa5.32□□□□□ -1.56
CTNND1-201ENST00000358694 KRTAP10-1P60331 282 aa5.31□□□□□ -1.56
CTNND1-201ENST00000358694 LINC00472Q9H8W2 130 aa5.31□□□□□ -1.56
CTNND1-201ENST00000358694 USP24Q9UPU5 2620 aa5.3□□□□□ -1.56
CTNND1-201ENST00000358694 Q8NDZ9 215 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms