RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 IGKV4-1P06312 121 aa6.67□□□□□ -1.34
PTPRA-203ENST00000356147 RPL37AP8A6NKH3 93 aa6.67□□□□□ -1.34
PTPRA-203ENST00000356147 WIPF1O43516 503 aa6.67□□□□□ -1.34
PTPRA-203ENST00000356147 PKIGQ9Y2B9 76 aa6.67□□□□□ -1.34
PTPRA-203ENST00000356147 LRCOL1A6NCL2 159 aa6.67□□□□□ -1.34
PTPRA-203ENST00000356147 EPM2AB3EWF7 344 aa6.67□□□□□ -1.34
PTPRA-203ENST00000356147 M0R378 163 aa6.67□□□□□ -1.34
PTPRA-203ENST00000356147 C1orf43Q9BWL3 253 aa6.67□□□□□ -1.34
PTPRA-203ENST00000356147 FAM30AQ9NZY2 134 aa6.67□□□□□ -1.34
PTPRA-203ENST00000356147 NSD1Q96L73 2696 aaPredicted RBP6.67□□□□□ -1.34
PTPRA-203ENST00000356147 GVQW2A0A096LPI5 108 aaPredicted RBP6.66□□□□□ -1.34
PTPRA-203ENST00000356147 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
PTPRA-203ENST00000356147 IGKV2D-24A0A075B6R9 120 aa6.66□□□□□ -1.34
PTPRA-203ENST00000356147 SMIM26A0A096LP01 95 aa6.66□□□□□ -1.34
PTPRA-203ENST00000356147 SERTAD4-AS1Q5TG53 156 aa6.66□□□□□ -1.34
PTPRA-203ENST00000356147 KPRPQ5T749 579 aaPredicted RBP6.65□□□□□ -1.34
PTPRA-203ENST00000356147 MAST4O15021 2626 aa6.65□□□□□ -1.34
PTPRA-203ENST00000356147 A0A0G2JQZ4 141 aa6.65□□□□□ -1.35
PTPRA-203ENST00000356147 A0A0U1RQV1 116 aa6.65□□□□□ -1.35
PTPRA-203ENST00000356147 A0A1W2PNN7 141 aa6.65□□□□□ -1.35
PTPRA-203ENST00000356147 BCE1O60756 84 aa6.65□□□□□ -1.35
PTPRA-203ENST00000356147 PRB2P02812 416 aaPredicted RBP6.65□□□□□ -1.35
PTPRA-203ENST00000356147 NOTCH1P46531 2555 aa6.64□□□□□ -1.35
PTPRA-203ENST00000356147 BRK1Q8WUW1 75 aa6.64□□□□□ -1.35
PTPRA-203ENST00000356147 Q6ZTC4 211 aa6.64□□□□□ -1.35
PTPRA-203ENST00000356147 Q8N377 158 aa6.64□□□□□ -1.35
PTPRA-203ENST00000356147 FAM168BA1KXE4 195 aa6.63□□□□□ -1.35
PTPRA-203ENST00000356147 EGFEM1PQ0D2K5 195 aa6.63□□□□□ -1.35
PTPRA-203ENST00000356147 SMIM29Q86T20 159 aa6.63□□□□□ -1.35
PTPRA-203ENST00000356147 ST20-AS1Q8NBB2 130 aa6.63□□□□□ -1.35
PTPRA-203ENST00000356147 KRTAP26-1Q6PEX3 210 aa6.63□□□□□ -1.35
PTPRA-203ENST00000356147 OCR1Q9BZK8 76 aa6.63□□□□□ -1.35
PTPRA-203ENST00000356147 FBN1P35555 2871 aaKnown RBP6.62□□□□□ -1.35
PTPRA-203ENST00000356147 PRYO14603 147 aa6.62□□□□□ -1.35
PTPRA-203ENST00000356147 NKAPP1Q8N9T2 125 aa6.62□□□□□ -1.35
PTPRA-203ENST00000356147 INAFM1C9JVW0 142 aa6.62□□□□□ -1.35
PTPRA-203ENST00000356147 PRR4Q16378 134 aa6.62□□□□□ -1.35
PTPRA-203ENST00000356147 ESRGQ1W209 222 aa6.62□□□□□ -1.35
PTPRA-203ENST00000356147 OXLD1Q5BKU9 147 aa6.62□□□□□ -1.35
PTPRA-203ENST00000356147 C7orf33Q8WU49 177 aa6.62□□□□□ -1.35
PTPRA-203ENST00000356147 MRAPQ8TCY5 172 aa6.61□□□□□ -1.35
PTPRA-203ENST00000356147 FUSP35637 526 aaKnown RBP eCLIP6.61□□□□□ -1.35
PTPRA-203ENST00000356147 PRO0628Q9UI54 55 aa6.61□□□□□ -1.35
PTPRA-203ENST00000356147 H3BQ85 93 aa6.6□□□□□ -1.35
PTPRA-203ENST00000356147 NDUFC1O43677 76 aa6.6□□□□□ -1.35
PTPRA-203ENST00000356147 DEFB116Q30KQ4 102 aa6.6□□□□□ -1.35
PTPRA-203ENST00000356147 SRRM2Q9UQ35 2752 aaKnown RBP6.6□□□□□ -1.35
PTPRA-203ENST00000356147 STAB1Q9NY15 2570 aa6.6□□□□□ -1.35
PTPRA-203ENST00000356147 SYCNQ0VAF6 134 aa6.6□□□□□ -1.35
PTPRA-203ENST00000356147 A0A1W2PNM2 257 aa6.59□□□□□ -1.35
PTPRA-203ENST00000356147 ANK2Q01484 3957 aa6.59□□□□□ -1.35
PTPRA-203ENST00000356147 CASC10Q5T4H9 136 aa6.58□□□□□ -1.36
PTPRA-203ENST00000356147 Q9BRP9 147 aa6.58□□□□□ -1.36
PTPRA-203ENST00000356147 COL6A5A8TX70 2615 aa6.58□□□□□ -1.36
PTPRA-203ENST00000356147 CSMD3Q7Z407 3707 aa6.58□□□□□ -1.36
PTPRA-203ENST00000356147 ERC2-IT1O76042 136 aa6.57□□□□□ -1.36
PTPRA-203ENST00000356147 C1orf137Q5JT78 98 aa6.57□□□□□ -1.36
PTPRA-203ENST00000356147 K7EQZ3 153 aa6.56□□□□□ -1.36
PTPRA-203ENST00000356147 KCNQ1DNQ9H478 68 aa6.55□□□□□ -1.36
PTPRA-203ENST00000356147 ETDCA0A1B0GVM5 59 aa6.54□□□□□ -1.36
PTPRA-203ENST00000356147 UBE2BP63146 152 aa6.54□□□□□ -1.36
PTPRA-203ENST00000356147 IGLV5-48A0A075B6I7 105 aa6.53□□□□□ -1.36
PTPRA-203ENST00000356147 Q6ZRX8 168 aa6.53□□□□□ -1.36
PTPRA-203ENST00000356147 ATP5EP56381 51 aaPredicted RBP6.53□□□□□ -1.36
PTPRA-203ENST00000356147 DSCR10P59022 87 aa6.53□□□□□ -1.36
PTPRA-203ENST00000356147 KRTAP7-1Q8IUC3 87 aa6.52□□□□□ -1.37
PTPRA-203ENST00000356147 NBEAL1Q6ZS30 2694 aa6.52□□□□□ -1.37
PTPRA-203ENST00000356147 DEFB131BA0A096LNP1 70 aa6.52□□□□□ -1.37
PTPRA-203ENST00000356147 WFDC13Q8IUB5 93 aa6.51□□□□□ -1.37
PTPRA-203ENST00000356147 J3QKU1 62 aa6.51□□□□□ -1.37
PTPRA-203ENST00000356147 KRTAP10-11P60412 298 aa6.5□□□□□ -1.37
PTPRA-203ENST00000356147 Q8NBF4 154 aa6.5□□□□□ -1.37
PTPRA-203ENST00000356147 PSPHP1O15172 72 aa6.5□□□□□ -1.37
PTPRA-203ENST00000356147 C1orf64Q8NEQ6 169 aa6.5□□□□□ -1.37
PTPRA-203ENST00000356147 IGLV1-50A0A075B6I6 118 aa6.49□□□□□ -1.37
PTPRA-203ENST00000356147 KRTAP4-16G5E9R7 235 aaPredicted RBP6.49□□□□□ -1.37
PTPRA-203ENST00000356147 RPL37AP61513 92 aaKnown RBP6.49□□□□□ -1.37
PTPRA-203ENST00000356147 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.48□□□□□ -1.37
PTPRA-203ENST00000356147 TNP2Q05952 138 aa6.48□□□□□ -1.37
PTPRA-203ENST00000356147 LINC01556Q5JQF7 62 aa6.48□□□□□ -1.37
PTPRA-203ENST00000356147 DHRS4-AS1Q9P1J3 65 aa6.48□□□□□ -1.37
PTPRA-203ENST00000356147 PRLHP81277 87 aa6.48□□□□□ -1.37
PTPRA-203ENST00000356147 IGKV2-24A0A0C4DH68 120 aa6.47□□□□□ -1.37
PTPRA-203ENST00000356147 hDV103S1A0JD37 113 aa6.47□□□□□ -1.37
PTPRA-203ENST00000356147 LINC00476Q8WZB0 136 aa6.47□□□□□ -1.37
PTPRA-203ENST00000356147 COL7A1Q02388 2944 aa6.47□□□□□ -1.37
PTPRA-203ENST00000356147 C11orf45Q8TAV5 145 aa6.47□□□□□ -1.37
PTPRA-203ENST00000356147 PSCAO43653 123 aa6.46□□□□□ -1.37
PTPRA-203ENST00000356147 MRPL55Q7Z7F7 128 aaKnown RBP6.46□□□□□ -1.38
PTPRA-203ENST00000356147 DNAH10Q8IVF4 4471 aa6.45□□□□□ -1.38
PTPRA-203ENST00000356147 A0A087WSZ3 146 aa6.45□□□□□ -1.38
PTPRA-203ENST00000356147 C1orf195Q5TG92 126 aa6.45□□□□□ -1.38
PTPRA-203ENST00000356147 A0A096LNI7 61 aa6.44□□□□□ -1.38
PTPRA-203ENST00000356147 TENM2Q9NT68 2774 aa6.44□□□□□ -1.38
PTPRA-203ENST00000356147 HCG22E2RYF7 251 aa6.44□□□□□ -1.38
PTPRA-203ENST00000356147 H3BNG1 76 aa6.44□□□□□ -1.38
PTPRA-203ENST00000356147 LYSTQ99698 3801 aa6.44□□□□□ -1.38
PTPRA-203ENST00000356147 SPRR1AP35321 89 aa6.43□□□□□ -1.38
PTPRA-203ENST00000356147 IGFL1Q6UW32 110 aa6.43□□□□□ -1.38
PTPRA-203ENST00000356147 SPRR4Q96PI1 79 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms