RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 A0A087WTM6 91 aa4.51□□□□□ -1.69
VPS13A-201ENST00000355766 H3BUT2 72 aa4.51□□□□□ -1.69
VPS13A-201ENST00000355766 TSPAN13O95857 204 aa4.51□□□□□ -1.69
VPS13A-201ENST00000355766 TLX1NBP0CAT3 122 aa4.51□□□□□ -1.69
VPS13A-201ENST00000355766 UBE2V1Q13404 147 aa4.51□□□□□ -1.69
VPS13A-201ENST00000355766 VAMP3Q15836 100 aa4.51□□□□□ -1.69
VPS13A-201ENST00000355766 CAMK2N2Q96S95 79 aa4.51□□□□□ -1.69
VPS13A-201ENST00000355766 SND1-IT1Q9HBX3 110 aa4.51□□□□□ -1.69
VPS13A-201ENST00000355766 CBY1Q9Y3M2 126 aa4.51□□□□□ -1.69
VPS13A-201ENST00000355766 TRBV10-2A0A0K0K1G8 114 aa4.5□□□□□ -1.69
VPS13A-201ENST00000355766 COX6CP09669 75 aa4.5□□□□□ -1.69
VPS13A-201ENST00000355766 C2orf82Q6UX34 121 aa4.5□□□□□ -1.69
VPS13A-201ENST00000355766 SOSTDC1Q6X4U4 206 aa4.5□□□□□ -1.69
VPS13A-201ENST00000355766 SPCS1Q9Y6A9 102 aa4.5□□□□□ -1.69
VPS13A-201ENST00000355766 GAGE10A6NGK3 116 aa4.49□□□□□ -1.69
VPS13A-201ENST00000355766 NDUFC2-KCTD14E9PQ53 114 aa4.49□□□□□ -1.69
VPS13A-201ENST00000355766 OXTP01178 125 aa4.49□□□□□ -1.69
VPS13A-201ENST00000355766 CNBPP62633 177 aaKnown RBP4.49□□□□□ -1.69
VPS13A-201ENST00000355766 SYCNQ0VAF6 134 aa4.49□□□□□ -1.69
VPS13A-201ENST00000355766 DAND5Q8N907 189 aa4.49□□□□□ -1.69
VPS13A-201ENST00000355766 CARD19Q96LW7 228 aa4.49□□□□□ -1.69
VPS13A-201ENST00000355766 Q9HAA7 133 aa4.49□□□□□ -1.69
VPS13A-201ENST00000355766 C6orf48Q9UBA6 75 aa4.49□□□□□ -1.69
VPS13A-201ENST00000355766 DNAH8Q96JB1 4490 aa4.48□□□□□ -1.69
VPS13A-201ENST00000355766 LRP2P98164 4655 aa4.48□□□□□ -1.69
VPS13A-201ENST00000355766 USP17L23D6RBM5 183 aa4.48□□□□□ -1.69
VPS13A-201ENST00000355766 M0QXV9 152 aa4.48□□□□□ -1.69
VPS13A-201ENST00000355766 PFN2P35080 140 aa4.48□□□□□ -1.69
VPS13A-201ENST00000355766 UNQ6190/PRO20217Q6UXQ8 127 aa4.48□□□□□ -1.69
VPS13A-201ENST00000355766 IGKV2-28A0A075B6P5 120 aa4.47□□□□□ -1.69
VPS13A-201ENST00000355766 IGLV5-52A0A0A0MRZ9 124 aa4.47□□□□□ -1.69
VPS13A-201ENST00000355766 IGKV2D-28P01615 120 aa4.47□□□□□ -1.69
VPS13A-201ENST00000355766 RPL13AP40429 203 aaKnown RBP4.47□□□□□ -1.69
VPS13A-201ENST00000355766 RPL28P46779 137 aaKnown RBP4.47□□□□□ -1.69
VPS13A-201ENST00000355766 Q1RN00 199 aa4.47□□□□□ -1.69
VPS13A-201ENST00000355766 LINC01600Q96MT4 127 aa4.47□□□□□ -1.69
VPS13A-201ENST00000355766 TMEM126AQ9H061 195 aa4.47□□□□□ -1.69
VPS13A-201ENST00000355766 A0A0U1RRA0 63 aa4.46□□□□□ -1.7
VPS13A-201ENST00000355766 F8W1H4 67 aa4.46□□□□□ -1.7
VPS13A-201ENST00000355766 H0YGX0 51 aa4.46□□□□□ -1.7
VPS13A-201ENST00000355766 PSCAO43653 123 aa4.46□□□□□ -1.7
VPS13A-201ENST00000355766 PSMB2P49721 201 aa4.46□□□□□ -1.7
VPS13A-201ENST00000355766 ATXN8Q156A1 80 aa4.46□□□□□ -1.7
VPS13A-201ENST00000355766 HIGD2BQ4VC39 106 aa4.46□□□□□ -1.7
VPS13A-201ENST00000355766 Q6ZRU5 148 aa4.46□□□□□ -1.7
VPS13A-201ENST00000355766 IGLV5-37A0A075B6J1 123 aa4.45□□□□□ -1.7
VPS13A-201ENST00000355766 A0A1B0GX51 115 aa4.45□□□□□ -1.7
VPS13A-201ENST00000355766 NPC2P61916 151 aa4.45□□□□□ -1.7
VPS13A-201ENST00000355766 LINC00337Q8N6G1 96 aa4.45□□□□□ -1.7
VPS13A-201ENST00000355766 PKHD1L1Q86WI1 4243 aa4.45□□□□□ -1.7
VPS13A-201ENST00000355766 TRBV7-6A0A0J9YX20 115 aa4.44□□□□□ -1.7
VPS13A-201ENST00000355766 LOC107984640A0A0U1RRK4 108 aa4.44□□□□□ -1.7
VPS13A-201ENST00000355766 LST1O00453 97 aa4.44□□□□□ -1.7
VPS13A-201ENST00000355766 IGLV6-57P01721 117 aa4.44□□□□□ -1.7
VPS13A-201ENST00000355766 TRACP01848 142 aa4.44□□□□□ -1.7
VPS13A-201ENST00000355766 SCGB1C2P0DMR2 95 aa4.44□□□□□ -1.7
VPS13A-201ENST00000355766 KRTAP10-4P60372 401 aaPredicted RBP4.44□□□□□ -1.7
VPS13A-201ENST00000355766 Q6ZSA8 131 aa4.44□□□□□ -1.7
VPS13A-201ENST00000355766 VPREB1P12018 145 aa4.43□□□□□ -1.7
VPS13A-201ENST00000355766 C9orf116Q5BN46 136 aaPredicted RBP4.43□□□□□ -1.7
VPS13A-201ENST00000355766 LINC00474Q9P2X8 69 aa4.43□□□□□ -1.7
VPS13A-201ENST00000355766 LRCOL1A6NCL2 159 aa4.42□□□□□ -1.7
VPS13A-201ENST00000355766 H3BQ85 93 aa4.42□□□□□ -1.7
VPS13A-201ENST00000355766 H3BT86 120 aa4.42□□□□□ -1.7
VPS13A-201ENST00000355766 H7C2G1 150 aa4.42□□□□□ -1.7
VPS13A-201ENST00000355766 M0R378 163 aa4.42□□□□□ -1.7
VPS13A-201ENST00000355766 SNCGO76070 127 aa4.42□□□□□ -1.7
VPS13A-201ENST00000355766 TCL1BO95988 128 aa4.42□□□□□ -1.7
VPS13A-201ENST00000355766 S100A7L2Q5SY68 101 aa4.42□□□□□ -1.7
VPS13A-201ENST00000355766 Q6ZRP5 223 aa4.42□□□□□ -1.7
VPS13A-201ENST00000355766 LINC00526Q96FQ7 95 aa4.42□□□□□ -1.7
VPS13A-201ENST00000355766 NAA38Q9BRA0 125 aaKnown RBP4.42□□□□□ -1.7
VPS13A-201ENST00000355766 H3BMG7 143 aa4.41□□□□□ -1.7
VPS13A-201ENST00000355766 Q8N814 137 aa4.41□□□□□ -1.7
VPS13A-201ENST00000355766 SMIM11BQ8TCY0 68 aa4.41□□□□□ -1.7
VPS13A-201ENST00000355766 PRO0461Q9UI25 63 aa4.41□□□□□ -1.7
VPS13A-201ENST00000355766 LINC01620Q4KN68 170 aa4.4□□□□□ -1.71
VPS13A-201ENST00000355766 SCXQ7RTU7 201 aa4.4□□□□□ -1.71
VPS13A-201ENST00000355766 C9orf163Q8N9P6 203 aa4.4□□□□□ -1.71
VPS13A-201ENST00000355766 NKAPP1Q8N9T2 125 aa4.4□□□□□ -1.71
VPS13A-201ENST00000355766 OR13C6PQ8NH95 151 aa4.4□□□□□ -1.71
VPS13A-201ENST00000355766 TNXBP22105 4242 aa4.4□□□□□ -1.71
VPS13A-201ENST00000355766 TRAV23DV6A0A075B6W5 121 aa4.39□□□□□ -1.71
VPS13A-201ENST00000355766 SLC25A20O43772 301 aa4.39□□□□□ -1.71
VPS13A-201ENST00000355766 DNAL4O96015 105 aa4.39□□□□□ -1.71
VPS13A-201ENST00000355766 RPL18AQ02543 176 aaKnown RBP4.39□□□□□ -1.71
VPS13A-201ENST00000355766 C9orf129Q5T035 196 aaKnown RBP4.39□□□□□ -1.71
VPS13A-201ENST00000355766 XAGE1AQ9HD64 81 aa4.39□□□□□ -1.71
VPS13A-201ENST00000355766 TRBV10-3A0A0K0K1G6 114 aa4.38□□□□□ -1.71
VPS13A-201ENST00000355766 J3QR89 54 aa4.38□□□□□ -1.71
VPS13A-201ENST00000355766 NCR3O14931 201 aa4.38□□□□□ -1.71
VPS13A-201ENST00000355766 ZNF73O43830 326 aaPredicted RBP4.38□□□□□ -1.71
VPS13A-201ENST00000355766 MT1HL1P0DM35 61 aa4.38□□□□□ -1.71
VPS13A-201ENST00000355766 WFDC2Q14508 124 aa4.38□□□□□ -1.71
VPS13A-201ENST00000355766 GAGE2EQ4V326 116 aa4.38□□□□□ -1.71
VPS13A-201ENST00000355766 TEN1Q86WV5 123 aa4.38□□□□□ -1.71
VPS13A-201ENST00000355766 ANKRD29Q8N6D5 301 aa4.38□□□□□ -1.71
VPS13A-201ENST00000355766 PRR26Q8N8Z3 221 aa4.38□□□□□ -1.71
VPS13A-201ENST00000355766 Q8NDZ9 215 aa4.38□□□□□ -1.71
VPS13A-201ENST00000355766 DIRC1Q969H9 104 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms