RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 LINC00336Q6ZUF6 198 aa3.53□□□□□ -1.84
CD47-201ENST00000355354 MEIG1Q5JSS6 88 aa3.53□□□□□ -1.84
CD47-201ENST00000355354 TRBV10-3A0A0K0K1G6 114 aa3.53□□□□□ -1.84
CD47-201ENST00000355354 Q6ZRU5 148 aa3.53□□□□□ -1.84
CD47-201ENST00000355354 RPL36AP83881 106 aaKnown RBP3.52□□□□□ -1.85
CD47-201ENST00000355354 Q6ZQY7 126 aa3.52□□□□□ -1.85
CD47-201ENST00000355354 PPDPFLQ8WWR9 84 aa3.52□□□□□ -1.85
CD47-201ENST00000355354 RPL36ALQ969Q0 106 aaKnown RBP3.52□□□□□ -1.85
CD47-201ENST00000355354 APLNQ9ULZ1 77 aa3.52□□□□□ -1.85
CD47-201ENST00000355354 RPL37AP61513 92 aaKnown RBP3.52□□□□□ -1.85
CD47-201ENST00000355354 A0A087WZ39 114 aa3.52□□□□□ -1.85
CD47-201ENST00000355354 TRBV10-2A0A0K0K1G8 114 aa3.52□□□□□ -1.85
CD47-201ENST00000355354 LEPROTO15243 131 aa3.52□□□□□ -1.85
CD47-201ENST00000355354 TRGV2A0A075B6R0 118 aa3.51□□□□□ -1.85
CD47-201ENST00000355354 HIST1H4AP62805 103 aaKnown RBP3.51□□□□□ -1.85
CD47-201ENST00000355354 IGHV4-28A0A0C4DH34 117 aa3.51□□□□□ -1.85
CD47-201ENST00000355354 NDUFA1O15239 70 aa3.51□□□□□ -1.85
CD47-201ENST00000355354 HRCT1Q6UXD1 115 aa3.51□□□□□ -1.85
CD47-201ENST00000355354 CRPP02741 224 aa3.5□□□□□ -1.85
CD47-201ENST00000355354 A0A1W2PNM2 257 aa3.5□□□□□ -1.85
CD47-201ENST00000355354 TRGV4A0A0C4DH28 118 aa3.5□□□□□ -1.85
CD47-201ENST00000355354 TRBV10-1A0A0K0K1A3 114 aa3.5□□□□□ -1.85
CD47-201ENST00000355354 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
CD47-201ENST00000355354 A0A0B4J2C4 111 aa3.5□□□□□ -1.85
CD47-201ENST00000355354 LINC01600Q96MT4 127 aa3.5□□□□□ -1.85
CD47-201ENST00000355354 RBM3P98179 157 aaKnown RBP3.49□□□□□ -1.85
CD47-201ENST00000355354 SPANXDQ9BXN6 97 aa3.49□□□□□ -1.85
CD47-201ENST00000355354 GAGE2AQ6NT46 116 aa3.49□□□□□ -1.85
CD47-201ENST00000355354 Q6ZRN7 208 aaPredicted RBP3.49□□□□□ -1.85
CD47-201ENST00000355354 FAM30AQ9NZY2 134 aa3.49□□□□□ -1.85
CD47-201ENST00000355354 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.49□□□□□ -1.85
CD47-201ENST00000355354 Q8N377 158 aa3.49□□□□□ -1.85
CD47-201ENST00000355354 ANAPC13Q9BS18 74 aa3.49□□□□□ -1.85
CD47-201ENST00000355354 H3BQ85 93 aa3.48□□□□□ -1.85
CD47-201ENST00000355354 H7BZZ5 65 aa3.48□□□□□ -1.85
CD47-201ENST00000355354 DAD1P61803 113 aa3.48□□□□□ -1.85
CD47-201ENST00000355354 GAGE2EQ4V326 116 aa3.48□□□□□ -1.85
CD47-201ENST00000355354 C16orf74Q96GX8 76 aa3.48□□□□□ -1.85
CD47-201ENST00000355354 GAGE2DQ9UEU5 116 aa3.48□□□□□ -1.85
CD47-201ENST00000355354 CD164L2Q6UWJ8 174 aa3.48□□□□□ -1.85
CD47-201ENST00000355354 KRTAP4-16G5E9R7 235 aaPredicted RBP3.47□□□□□ -1.85
CD47-201ENST00000355354 COX7A2LO14548 114 aa3.47□□□□□ -1.85
CD47-201ENST00000355354 LINC00158P58513 81 aa3.47□□□□□ -1.85
CD47-201ENST00000355354 HERVK_113P63121 156 aa3.47□□□□□ -1.85
CD47-201ENST00000355354 MIFP14174 115 aa3.47□□□□□ -1.85
CD47-201ENST00000355354 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
CD47-201ENST00000355354 SMIM9A6NGZ8 99 aa3.47□□□□□ -1.85
CD47-201ENST00000355354 MALP21145 153 aa3.47□□□□□ -1.85
CD47-201ENST00000355354 C20orf197Q8N268 126 aa3.47□□□□□ -1.85
CD47-201ENST00000355354 CHCHD10Q8WYQ3 142 aaPredicted RBP3.47□□□□□ -1.85
CD47-201ENST00000355354 SPANXCQ9NY87 97 aa3.47□□□□□ -1.85
CD47-201ENST00000355354 DEFB121Q5J5C9 76 aa3.47□□□□□ -1.85
CD47-201ENST00000355354 CDK2AP2O75956 126 aa3.46□□□□□ -1.86
CD47-201ENST00000355354 GAGE2BQ13066 116 aa3.46□□□□□ -1.86
CD47-201ENST00000355354 TRBV6-4A0A1B0GX49 114 aa3.46□□□□□ -1.86
CD47-201ENST00000355354 PRLHP81277 87 aa3.46□□□□□ -1.86
CD47-201ENST00000355354 UBE2WQ96B02 151 aa3.46□□□□□ -1.86
CD47-201ENST00000355354 UBE2DNLQ8IWF7 75 aa3.46□□□□□ -1.86
CD47-201ENST00000355354 SMIM29Q86T20 159 aa3.45□□□□□ -1.86
CD47-201ENST00000355354 DNAL4O96015 105 aa3.45□□□□□ -1.86
CD47-201ENST00000355354 VPREB1P12018 145 aa3.45□□□□□ -1.86
CD47-201ENST00000355354 TAL2Q16559 108 aa3.45□□□□□ -1.86
CD47-201ENST00000355354 OR13C6PQ8NH95 151 aa3.45□□□□□ -1.86
CD47-201ENST00000355354 SPANXA1Q9NS26 97 aa3.45□□□□□ -1.86
CD47-201ENST00000355354 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.44□□□□□ -1.86
CD47-201ENST00000355354 DEFB105AQ8NG35 78 aa3.44□□□□□ -1.86
CD47-201ENST00000355354 USP17L23D6RBM5 183 aa3.44□□□□□ -1.86
CD47-201ENST00000355354 COX7B2Q8TF08 81 aa3.44□□□□□ -1.86
CD47-201ENST00000355354 TMEM243Q9BU79 118 aa3.44□□□□□ -1.86
CD47-201ENST00000355354 TRBV7-7A0A0K0K1E9 115 aa3.43□□□□□ -1.86
CD47-201ENST00000355354 S100A7L2Q5SY68 101 aa3.43□□□□□ -1.86
CD47-201ENST00000355354 Q8N814 137 aa3.43□□□□□ -1.86
CD47-201ENST00000355354 PRR34Q9NV39 138 aa3.43□□□□□ -1.86
CD47-201ENST00000355354 KRTAP16-1A8MUX0 517 aa3.43□□□□□ -1.86
CD47-201ENST00000355354 REG3AQ06141 175 aa3.43□□□□□ -1.86
CD47-201ENST00000355354 A0A0J9YWU9 116 aa3.43□□□□□ -1.86
CD47-201ENST00000355354 DSCR10P59022 87 aa3.43□□□□□ -1.86
CD47-201ENST00000355354 DPH3Q96FX2 82 aa3.43□□□□□ -1.86
CD47-201ENST00000355354 SPART-AS1P0CW21 52 aa3.42□□□□□ -1.86
CD47-201ENST00000355354 FLGP20930 4061 aaPredicted RBP3.42□□□□□ -1.86
CD47-201ENST00000355354 LYRM9A8MSI8 78 aa3.42□□□□□ -1.86
CD47-201ENST00000355354 EPM2AB3EWF7 344 aa3.42□□□□□ -1.86
CD47-201ENST00000355354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.42□□□□□ -1.86
CD47-201ENST00000355354 A0A1B0GX51 115 aa3.42□□□□□ -1.86
CD47-201ENST00000355354 ADM2Q7Z4H4 148 aa3.42□□□□□ -1.86
CD47-201ENST00000355354 Q6ZQT0 140 aa3.42□□□□□ -1.86
CD47-201ENST00000355354 Q6ZVQ6 151 aa3.42□□□□□ -1.86
CD47-201ENST00000355354 C14orf177Q52M58 125 aa3.41□□□□□ -1.86
CD47-201ENST00000355354 C6orf226Q5I0X4 101 aa3.41□□□□□ -1.86
CD47-201ENST00000355354 HIGD2AQ9BW72 106 aa3.41□□□□□ -1.86
CD47-201ENST00000355354 IFITM1P13164 125 aa3.41□□□□□ -1.86
CD47-201ENST00000355354 K7EQZ3 153 aa3.41□□□□□ -1.86
CD47-201ENST00000355354 ATP6V0E2Q8NHE4 81 aa3.41□□□□□ -1.86
CD47-201ENST00000355354 Q6Q795 121 aa3.4□□□□□ -1.86
CD47-201ENST00000355354 C7orf33Q8WU49 177 aa3.4□□□□□ -1.86
CD47-201ENST00000355354 LINC00588Q9Y4M8 146 aa3.4□□□□□ -1.86
CD47-201ENST00000355354 ATXN8Q156A1 80 aa3.4□□□□□ -1.87
CD47-201ENST00000355354 Q6ZSA8 131 aa3.4□□□□□ -1.87
CD47-201ENST00000355354 IGKV2-24A0A0C4DH68 120 aa3.39□□□□□ -1.87
CD47-201ENST00000355354 IGLV6-57P01721 117 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms