RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 CMYA5Q8N3K9 4069 aa12.8□□□□□ -0.36
COL13A1-201ENST00000354547 PDE6GP18545 87 aa12.79□□□□□ -0.36
COL13A1-201ENST00000354547 C20orf197Q8N268 126 aa12.79□□□□□ -0.36
COL13A1-201ENST00000354547 TRAV10A0A0B4J240 114 aa12.78□□□□□ -0.36
COL13A1-201ENST00000354547 FAM168BA1KXE4 195 aa12.78□□□□□ -0.36
COL13A1-201ENST00000354547 C7orf33Q8WU49 177 aa12.78□□□□□ -0.36
COL13A1-201ENST00000354547 TRBV7-6A0A0J9YX20 115 aa12.77□□□□□ -0.37
COL13A1-201ENST00000354547 H3BQ85 93 aa12.76□□□□□ -0.37
COL13A1-201ENST00000354547 LINC00588Q9Y4M8 146 aa12.75□□□□□ -0.37
COL13A1-201ENST00000354547 Q8N9L7 120 aa12.75□□□□□ -0.37
COL13A1-201ENST00000354547 MGAM2Q2M2H8 2515 aa12.74□□□□□ -0.37
COL13A1-201ENST00000354547 C3orf84H3BNL1 204 aa12.74□□□□□ -0.37
COL13A1-201ENST00000354547 DNAH10OSP0CZ25 163 aa12.72□□□□□ -0.37
COL13A1-201ENST00000354547 J3KT08 172 aa12.71□□□□□ -0.38
COL13A1-201ENST00000354547 TMEM258P61165 79 aa12.7□□□□□ -0.38
COL13A1-201ENST00000354547 KCNQ1DNQ9H478 68 aa12.7□□□□□ -0.38
COL13A1-201ENST00000354547 CXCL6P80162 114 aa12.69□□□□□ -0.38
COL13A1-201ENST00000354547 FAM19A5Q7Z5A7 132 aaPredicted RBP12.69□□□□□ -0.38
COL13A1-201ENST00000354547 Q8N377 158 aa12.68□□□□□ -0.38
COL13A1-201ENST00000354547 SNURFQ9Y675 71 aa12.68□□□□□ -0.38
COL13A1-201ENST00000354547 DPH3Q96FX2 82 aa12.67□□□□□ -0.38
COL13A1-201ENST00000354547 ST20-AS1Q8NBB2 130 aa12.66□□□□□ -0.38
COL13A1-201ENST00000354547 NREPQ16612 68 aa12.65□□□□□ -0.38
COL13A1-201ENST00000354547 ETDCA0A1B0GVM5 59 aa12.65□□□□□ -0.38
COL13A1-201ENST00000354547 STAB2Q8WWQ8 2551 aa12.65□□□□□ -0.39
COL13A1-201ENST00000354547 TRAV7A0A075B6U4 112 aa12.64□□□□□ -0.39
COL13A1-201ENST00000354547 TM2D3Q9BRN9 247 aa12.64□□□□□ -0.39
COL13A1-201ENST00000354547 Q9BRP9 147 aa12.64□□□□□ -0.39
COL13A1-201ENST00000354547 F8WDY8 70 aa12.62□□□□□ -0.39
COL13A1-201ENST00000354547 BPY2O14599 106 aa12.62□□□□□ -0.39
COL13A1-201ENST00000354547 KRTAP7-1Q8IUC3 87 aa12.62□□□□□ -0.39
COL13A1-201ENST00000354547 Q6ZRX8 168 aa12.62□□□□□ -0.39
COL13A1-201ENST00000354547 RMI2Q96E14 147 aa12.61□□□□□ -0.39
COL13A1-201ENST00000354547 IGLV1-50A0A075B6I6 118 aa12.6□□□□□ -0.39
COL13A1-201ENST00000354547 TENM2Q9NT68 2774 aa12.6□□□□□ -0.39
COL13A1-201ENST00000354547 OXTP01178 125 aa12.59□□□□□ -0.39
COL13A1-201ENST00000354547 UBE2BP63146 152 aa12.59□□□□□ -0.39
COL13A1-201ENST00000354547 DNAH3Q8TD57 4116 aa12.59□□□□□ -0.39
COL13A1-201ENST00000354547 LYSTQ99698 3801 aa12.59□□□□□ -0.39
COL13A1-201ENST00000354547 ERC2-IT1O76042 136 aa12.59□□□□□ -0.39
COL13A1-201ENST00000354547 TLX1NBP0CAT3 122 aa12.58□□□□□ -0.4
COL13A1-201ENST00000354547 IGKV2-24A0A0C4DH68 120 aa12.57□□□□□ -0.4
COL13A1-201ENST00000354547 DHRS4-AS1Q9P1J3 65 aa12.57□□□□□ -0.4
COL13A1-201ENST00000354547 K7EIL1 84 aa12.56□□□□□ -0.4
COL13A1-201ENST00000354547 MRPL55Q7Z7F7 128 aaKnown RBP12.56□□□□□ -0.4
COL13A1-201ENST00000354547 HUWE1Q7Z6Z7 4374 aaKnown RBP12.56□□□□□ -0.4
COL13A1-201ENST00000354547 CSMD3Q7Z407 3707 aa12.56□□□□□ -0.4
COL13A1-201ENST00000354547 KRTAP4-16G5E9R7 235 aaPredicted RBP12.54□□□□□ -0.4
COL13A1-201ENST00000354547 RPS28P62857 69 aaKnown RBP12.54□□□□□ -0.4
COL13A1-201ENST00000354547 DNAH10Q8IVF4 4471 aa12.54□□□□□ -0.4
COL13A1-201ENST00000354547 A0A0G2JQZ4 141 aa12.54□□□□□ -0.4
COL13A1-201ENST00000354547 A0A1W2PNN7 141 aa12.54□□□□□ -0.4
COL13A1-201ENST00000354547 H7BZZ5 65 aa12.54□□□□□ -0.4
COL13A1-201ENST00000354547 PRYO14603 147 aa12.54□□□□□ -0.4
COL13A1-201ENST00000354547 IGKV4-1P06312 121 aa12.54□□□□□ -0.4
COL13A1-201ENST00000354547 C1orf137Q5JT78 98 aa12.54□□□□□ -0.4
COL13A1-201ENST00000354547 FUSP35637 526 aaKnown RBP eCLIP12.53□□□□□ -0.4
COL13A1-201ENST00000354547 COL7A1Q02388 2944 aa12.53□□□□□ -0.4
COL13A1-201ENST00000354547 A0A1W2PNM2 257 aa12.52□□□□□ -0.4
COL13A1-201ENST00000354547 IGLV5-48A0A075B6I7 105 aa12.52□□□□□ -0.41
COL13A1-201ENST00000354547 PLA2G2DQ9UNK4 145 aa12.52□□□□□ -0.41
COL13A1-201ENST00000354547 FAM236DA0A1B0GTK5 79 aa12.51□□□□□ -0.41
COL13A1-201ENST00000354547 FAM236CP0DP71 79 aa12.51□□□□□ -0.41
COL13A1-201ENST00000354547 F8WEM9 126 aa12.51□□□□□ -0.41
COL13A1-201ENST00000354547 SRRM2Q9UQ35 2752 aaKnown RBP12.51□□□□□ -0.41
COL13A1-201ENST00000354547 BCE1O60756 84 aa12.5□□□□□ -0.41
COL13A1-201ENST00000354547 DNAH1Q9P2D7 4330 aa12.5□□□□□ -0.41
COL13A1-201ENST00000354547 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.49□□□□□ -0.41
COL13A1-201ENST00000354547 SPRR1AP35321 89 aa12.49□□□□□ -0.41
COL13A1-201ENST00000354547 KRTAP1-5Q9BYS1 174 aa12.49□□□□□ -0.41
COL13A1-201ENST00000354547 IGLV5-37A0A075B6J1 123 aa12.48□□□□□ -0.41
COL13A1-201ENST00000354547 PSCAO43653 123 aa12.48□□□□□ -0.41
COL13A1-201ENST00000354547 KLKP1Q107X0 134 aa12.47□□□□□ -0.41
COL13A1-201ENST00000354547 REG3GQ6UW15 175 aa12.47□□□□□ -0.41
COL13A1-201ENST00000354547 PRLHP81277 87 aa12.47□□□□□ -0.41
COL13A1-201ENST00000354547 A0A096LNI7 61 aa12.46□□□□□ -0.41
COL13A1-201ENST00000354547 HIGD2AQ9BW72 106 aa12.43□□□□□ -0.42
COL13A1-201ENST00000354547 UBE2DNLQ8IWF7 75 aa12.43□□□□□ -0.42
COL13A1-201ENST00000354547 TNP2Q05952 138 aa12.42□□□□□ -0.42
COL13A1-201ENST00000354547 Q8NBF4 154 aa12.42□□□□□ -0.42
COL13A1-201ENST00000354547 TMEM254Q8TBM7 123 aa12.42□□□□□ -0.42
COL13A1-201ENST00000354547 C4orf26Q17RF5 130 aa12.41□□□□□ -0.42
COL13A1-201ENST00000354547 FAM30AQ9NZY2 134 aa12.41□□□□□ -0.42
COL13A1-201ENST00000354547 DEFB116Q30KQ4 102 aa12.4□□□□□ -0.42
COL13A1-201ENST00000354547 CHTF8P0CG12 524 aa12.4□□□□□ -0.42
COL13A1-201ENST00000354547 SMIM29Q86T20 159 aa12.4□□□□□ -0.43
COL13A1-201ENST00000354547 DNAH9Q9NYC9 4486 aa12.38□□□□□ -0.43
COL13A1-201ENST00000354547 LINC00476Q8WZB0 136 aa12.38□□□□□ -0.43
COL13A1-201ENST00000354547 OCR1Q9BZK8 76 aa12.37□□□□□ -0.43
COL13A1-201ENST00000354547 C16orf90A8MZG2 172 aa12.34□□□□□ -0.43
COL13A1-201ENST00000354547 K7EQZ3 153 aa12.34□□□□□ -0.43
COL13A1-201ENST00000354547 HRCT1Q6UXD1 115 aa12.34□□□□□ -0.43
COL13A1-201ENST00000354547 PHF5AQ7RTV0 110 aaKnown RBP12.33□□□□□ -0.44
COL13A1-201ENST00000354547 Q5XG85 94 aa12.33□□□□□ -0.44
COL13A1-201ENST00000354547 SERP1Q9Y6X1 66 aa12.32□□□□□ -0.44
COL13A1-201ENST00000354547 DSCR10P59022 87 aa12.32□□□□□ -0.44
COL13A1-201ENST00000354547 SPRR4Q96PI1 79 aa12.32□□□□□ -0.44
COL13A1-201ENST00000354547 IGFL1Q6UW32 110 aa12.32□□□□□ -0.44
COL13A1-201ENST00000354547 KRTAP11-1Q8IUC1 163 aa12.31□□□□□ -0.44
COL13A1-201ENST00000354547 DNAH7Q8WXX0 4024 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms