RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 Q6ZRP5 223 aa3.47□□□□□ -1.85
SKP1-202ENST00000353411 SETXQ7Z333 2677 aaKnown RBP3.47□□□□□ -1.85
SKP1-202ENST00000353411 C10orf142B7Z368 130 aa3.47□□□□□ -1.85
SKP1-202ENST00000353411 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.47□□□□□ -1.85
SKP1-202ENST00000353411 GCN1Q92616 2671 aaKnown RBP3.47□□□□□ -1.85
SKP1-202ENST00000353411 EPM2AB3EWF7 344 aa3.47□□□□□ -1.85
SKP1-202ENST00000353411 DEFB116Q30KQ4 102 aa3.47□□□□□ -1.85
SKP1-202ENST00000353411 MKI67P46013 3256 aaKnown RBP3.46□□□□□ -1.85
SKP1-202ENST00000353411 FAM229BQ4G0N7 80 aa3.46□□□□□ -1.86
SKP1-202ENST00000353411 PHF5AQ7RTV0 110 aaKnown RBP3.46□□□□□ -1.86
SKP1-202ENST00000353411 AVPP01185 164 aa3.46□□□□□ -1.86
SKP1-202ENST00000353411 DSPP15924 2871 aaKnown RBP3.46□□□□□ -1.86
SKP1-202ENST00000353411 C9orf129Q5T035 196 aaKnown RBP3.45□□□□□ -1.86
SKP1-202ENST00000353411 DEFB135Q30KP9 77 aa3.45□□□□□ -1.86
SKP1-202ENST00000353411 C16orf95Q9H693 158 aa3.45□□□□□ -1.86
SKP1-202ENST00000353411 CELSR3Q9NYQ7 3312 aa3.45□□□□□ -1.86
SKP1-202ENST00000353411 MIR22HGQ0VDD5 57 aa3.45□□□□□ -1.86
SKP1-202ENST00000353411 A0A096LNI7 61 aa3.45□□□□□ -1.86
SKP1-202ENST00000353411 KLK9Q2XQG4 91 aa3.45□□□□□ -1.86
SKP1-202ENST00000353411 SPINT4Q6UDR6 99 aa3.45□□□□□ -1.86
SKP1-202ENST00000353411 K7EQZ3 153 aa3.44□□□□□ -1.86
SKP1-202ENST00000353411 IGHV6-1A0A0B4J1U7 121 aa3.44□□□□□ -1.86
SKP1-202ENST00000353411 MOBPQ13875 183 aa3.44□□□□□ -1.86
SKP1-202ENST00000353411 ZNF702PQ9H963 129 aa3.44□□□□□ -1.86
SKP1-202ENST00000353411 ASB16-AS1Q495Z4 193 aa3.43□□□□□ -1.86
SKP1-202ENST00000353411 GVQW2A0A096LPI5 108 aaPredicted RBP3.43□□□□□ -1.86
SKP1-202ENST00000353411 C11orf71Q6IPW1 123 aa3.43□□□□□ -1.86
SKP1-202ENST00000353411 Q5VV11 94 aa3.43□□□□□ -1.86
SKP1-202ENST00000353411 IGKV2-24A0A0C4DH68 120 aa3.43□□□□□ -1.86
SKP1-202ENST00000353411 A8MWP4 228 aa3.43□□□□□ -1.86
SKP1-202ENST00000353411 C16orf90A8MZG2 172 aa3.42□□□□□ -1.86
SKP1-202ENST00000353411 Q6YL49 198 aa3.42□□□□□ -1.86
SKP1-202ENST00000353411 Q6ZRX8 168 aa3.42□□□□□ -1.86
SKP1-202ENST00000353411 Q8N9P0 234 aaPredicted RBP3.42□□□□□ -1.86
SKP1-202ENST00000353411 DEFB4AO15263 64 aa3.42□□□□□ -1.86
SKP1-202ENST00000353411 ZNF292O60281 2723 aa3.42□□□□□ -1.86
SKP1-202ENST00000353411 CDH23Q9H251 3354 aa3.41□□□□□ -1.86
SKP1-202ENST00000353411 BOD1L1Q8NFC6 3051 aa3.41□□□□□ -1.86
SKP1-202ENST00000353411 KCNQ1DNQ9H478 68 aa3.41□□□□□ -1.86
SKP1-202ENST00000353411 ODF3L2Q3SX64 289 aa3.41□□□□□ -1.86
SKP1-202ENST00000353411 MGAQ8IWI9 3026 aa3.41□□□□□ -1.86
SKP1-202ENST00000353411 TRANK1O15050 2925 aa3.41□□□□□ -1.86
SKP1-202ENST00000353411 LINC00313P59037 77 aa3.41□□□□□ -1.86
SKP1-202ENST00000353411 APCP25054 2843 aa3.41□□□□□ -1.86
SKP1-202ENST00000353411 LINC00476Q8WZB0 136 aa3.41□□□□□ -1.86
SKP1-202ENST00000353411 LAMA3Q16787 3333 aa3.41□□□□□ -1.86
SKP1-202ENST00000353411 A0A1W2PNU3 283 aaPredicted RBP3.4□□□□□ -1.86
SKP1-202ENST00000353411 ASH1LQ9NR48 2969 aaKnown RBP3.4□□□□□ -1.86
SKP1-202ENST00000353411 SPINK6Q6UWN8 80 aa3.4□□□□□ -1.86
SKP1-202ENST00000353411 WDFY4Q6ZS81 3184 aa3.4□□□□□ -1.86
SKP1-202ENST00000353411 VCANP13611 3396 aa3.4□□□□□ -1.87
SKP1-202ENST00000353411 RANBP2P49792 3224 aaKnown RBP3.4□□□□□ -1.87
SKP1-202ENST00000353411 MAPK1IP1LQ8NDC0 245 aa3.4□□□□□ -1.87
SKP1-202ENST00000353411 NUPR2A6NF83 97 aa3.39□□□□□ -1.87
SKP1-202ENST00000353411 C10orf99Q6UWK7 81 aa3.39□□□□□ -1.87
SKP1-202ENST00000353411 LINC01558Q9Y6Z2 57 aa3.39□□□□□ -1.87
SKP1-202ENST00000353411 C7orf33Q8WU49 177 aa3.39□□□□□ -1.87
SKP1-202ENST00000353411 HTTP42858 3142 aa3.39□□□□□ -1.87
SKP1-202ENST00000353411 UNC80Q8N2C7 3258 aa3.39□□□□□ -1.87
SKP1-202ENST00000353411 ZNF575Q86XF7 245 aa3.38□□□□□ -1.87
SKP1-202ENST00000353411 SSBP3-AS1Q7Z2R9 100 aa3.38□□□□□ -1.87
SKP1-202ENST00000353411 IGLV7-46A0A075B6I9 117 aa3.38□□□□□ -1.87
SKP1-202ENST00000353411 ST20-AS1Q8NBB2 130 aa3.37□□□□□ -1.87
SKP1-202ENST00000353411 DEFB131BA0A096LNP1 70 aa3.37□□□□□ -1.87
SKP1-202ENST00000353411 PRAC1Q96KF2 57 aa3.36□□□□□ -1.87
SKP1-202ENST00000353411 C22orf24Q9Y442 160 aa3.36□□□□□ -1.87
SKP1-202ENST00000353411 IGLV5-48A0A075B6I7 105 aa3.36□□□□□ -1.87
SKP1-202ENST00000353411 SPINK1P00995 79 aa3.36□□□□□ -1.87
SKP1-202ENST00000353411 LAMA1P25391 3075 aa3.36□□□□□ -1.87
SKP1-202ENST00000353411 WDFY3Q8IZQ1 3526 aa3.35□□□□□ -1.87
SKP1-202ENST00000353411 C1orf134Q5TEV5 83 aa3.35□□□□□ -1.87
SKP1-202ENST00000353411 CHD9Q3L8U1 2897 aa3.35□□□□□ -1.87
SKP1-202ENST00000353411 RPL37AP61513 92 aaKnown RBP3.35□□□□□ -1.87
SKP1-202ENST00000353411 NBEAL2Q6ZNJ1 2754 aa3.35□□□□□ -1.87
SKP1-202ENST00000353411 FREM2Q5SZK8 3169 aa3.35□□□□□ -1.87
SKP1-202ENST00000353411 Q8N377 158 aa3.35□□□□□ -1.87
SKP1-202ENST00000353411 MRPL34Q9BQ48 92 aaKnown RBP3.35□□□□□ -1.87
SKP1-202ENST00000353411 CHD7Q9P2D1 2997 aa3.35□□□□□ -1.87
SKP1-202ENST00000353411 INAFM1C9JVW0 142 aa3.35□□□□□ -1.87
SKP1-202ENST00000353411 M0R2N4 97 aa3.34□□□□□ -1.87
SKP1-202ENST00000353411 ZZEF1O43149 2961 aa3.34□□□□□ -1.87
SKP1-202ENST00000353411 IGLV1-51P01701 117 aa3.34□□□□□ -1.87
SKP1-202ENST00000353411 PRLHP81277 87 aa3.34□□□□□ -1.87
SKP1-202ENST00000353411 C18orf65Q6ZTR6 163 aa3.34□□□□□ -1.87
SKP1-202ENST00000353411 IGLV8-61A0A075B6I0 122 aa3.33□□□□□ -1.88
SKP1-202ENST00000353411 A6NN06 94 aa3.33□□□□□ -1.88
SKP1-202ENST00000353411 SPRR4Q96PI1 79 aa3.33□□□□□ -1.88
SKP1-202ENST00000353411 CRIPTQ9P021 101 aa3.33□□□□□ -1.88
SKP1-202ENST00000353411 KALRNO60229 2985 aa3.33□□□□□ -1.88
SKP1-202ENST00000353411 KRTAP16-1A8MUX0 517 aa3.32□□□□□ -1.88
SKP1-202ENST00000353411 IGFL1Q6UW32 110 aa3.32□□□□□ -1.88
SKP1-202ENST00000353411 COL6A3P12111 3177 aa3.32□□□□□ -1.88
SKP1-202ENST00000353411 IGKV2D-30A0A075B6S6 120 aa3.32□□□□□ -1.88
SKP1-202ENST00000353411 IGKV2-30P06310 120 aa3.32□□□□□ -1.88
SKP1-202ENST00000353411 PLA2G1BP04054 148 aaKnown RBP3.32□□□□□ -1.88
SKP1-202ENST00000353411 CSAG1Q6PB30 78 aa3.32□□□□□ -1.88
SKP1-202ENST00000353411 DMAC1Q96GE9 116 aa3.32□□□□□ -1.88
SKP1-202ENST00000353411 A0A096LNT2 108 aa3.31□□□□□ -1.88
SKP1-202ENST00000353411 A0A1W2PNM2 257 aa3.31□□□□□ -1.88
SKP1-202ENST00000353411 DSCR10P59022 87 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms