RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 HERVK_113P61574 105 aa9.41□□□□□ -0.9
SMN1-201ENST00000351205 S100A7L2Q5SY68 101 aa9.41□□□□□ -0.9
SMN1-201ENST00000351205 FABP4P15090 132 aa9.4□□□□□ -0.9
SMN1-201ENST00000351205 SEC61BP60468 96 aaKnown RBP9.4□□□□□ -0.9
SMN1-201ENST00000351205 HSPB8Q9UJY1 196 aa9.4□□□□□ -0.9
SMN1-201ENST00000351205 TRAV23DV6A0A075B6W5 121 aa9.39□□□□□ -0.91
SMN1-201ENST00000351205 SLC25A20O43772 301 aa9.39□□□□□ -0.91
SMN1-201ENST00000351205 IGKCP01834 107 aa9.39□□□□□ -0.91
SMN1-201ENST00000351205 SOSTDC1Q6X4U4 206 aa9.39□□□□□ -0.91
SMN1-201ENST00000351205 KRTAP9-6A0A140TA67 174 aa9.38□□□□□ -0.91
SMN1-201ENST00000351205 EIF4EBP3O60516 100 aaPredicted RBP9.38□□□□□ -0.91
SMN1-201ENST00000351205 NPC2P61916 151 aa9.38□□□□□ -0.91
SMN1-201ENST00000351205 JOSD1Q15040 202 aaPredicted RBP9.37□□□□□ -0.91
SMN1-201ENST00000351205 C9orf153Q5TBE3 101 aa9.37□□□□□ -0.91
SMN1-201ENST00000351205 A0A0J9YXY3 114 aa9.36□□□□□ -0.91
SMN1-201ENST00000351205 ZNF73O43830 326 aaPredicted RBP9.36□□□□□ -0.91
SMN1-201ENST00000351205 ADAMTSL4-AS1Q5T5F5 129 aa9.36□□□□□ -0.91
SMN1-201ENST00000351205 ST20-AS1Q8NBB2 130 aa9.36□□□□□ -0.91
SMN1-201ENST00000351205 LINC01547P58512 204 aaPredicted RBP9.35□□□□□ -0.91
SMN1-201ENST00000351205 XP32Q5T750 250 aa9.33□□□□□ -0.92
SMN1-201ENST00000351205 E9PLD3 99 aa9.32□□□□□ -0.92
SMN1-201ENST00000351205 C5orf52A6NGY3 159 aa9.29□□□□□ -0.92
SMN1-201ENST00000351205 HINT1P49773 126 aaPredicted RBP9.29□□□□□ -0.92
SMN1-201ENST00000351205 LITAFQ99732 161 aa9.28□□□□□ -0.92
SMN1-201ENST00000351205 SPANXCQ9NY87 97 aa9.28□□□□□ -0.92
SMN1-201ENST00000351205 CBY1Q9Y3M2 126 aa9.28□□□□□ -0.92
SMN1-201ENST00000351205 COLCA2A8K830 154 aa9.27□□□□□ -0.93
SMN1-201ENST00000351205 LINC00308Q8TCZ7 52 aa9.27□□□□□ -0.93
SMN1-201ENST00000351205 SPRR1BP22528 89 aa9.26□□□□□ -0.93
SMN1-201ENST00000351205 OR13C6PQ8NH95 151 aa9.26□□□□□ -0.93
SMN1-201ENST00000351205 SYS1-DBNDD2H3BUS1 97 aa9.25□□□□□ -0.93
SMN1-201ENST00000351205 HRCT1Q6UXD1 115 aa9.24□□□□□ -0.93
SMN1-201ENST00000351205 DHRS4-AS1Q9P1J3 65 aa9.24□□□□□ -0.93
SMN1-201ENST00000351205 TIMM17BO60830 172 aa9.23□□□□□ -0.93
SMN1-201ENST00000351205 SLC25A34Q6PIV7 304 aa9.23□□□□□ -0.93
SMN1-201ENST00000351205 LIMD2Q9BT23 127 aa9.23□□□□□ -0.93
SMN1-201ENST00000351205 SPANXDQ9BXN6 97 aa9.22□□□□□ -0.93
SMN1-201ENST00000351205 SLC7A5P1Q8MH63 180 aa9.21□□□□□ -0.94
SMN1-201ENST00000351205 LAMTOR3Q9UHA4 124 aa9.21□□□□□ -0.94
SMN1-201ENST00000351205 ZNF815PA8K554 130 aa9.2□□□□□ -0.94
SMN1-201ENST00000351205 ELOF1P60002 83 aaKnown RBP9.2□□□□□ -0.94
SMN1-201ENST00000351205 LINC01545Q5VT33 79 aa9.2□□□□□ -0.94
SMN1-201ENST00000351205 TTTY13Q9BZ97 58 aa9.2□□□□□ -0.94
SMN1-201ENST00000351205 C9orf92A6NGG3 77 aa9.19□□□□□ -0.94
SMN1-201ENST00000351205 COX7BP24311 80 aa9.19□□□□□ -0.94
SMN1-201ENST00000351205 C6orf99Q4VX62 202 aa9.19□□□□□ -0.94
SMN1-201ENST00000351205 HIST1H2BKO60814 126 aa9.18□□□□□ -0.94
SMN1-201ENST00000351205 HIST1H2BJP06899 126 aa9.18□□□□□ -0.94
SMN1-201ENST00000351205 HIST1H2BOP23527 126 aa9.18□□□□□ -0.94
SMN1-201ENST00000351205 HIST1H2BBP33778 126 aa9.18□□□□□ -0.94
SMN1-201ENST00000351205 HIST1H2BDP58876 126 aa9.18□□□□□ -0.94
SMN1-201ENST00000351205 HIST1H2BCP62807 126 aa9.18□□□□□ -0.94
SMN1-201ENST00000351205 HIST2H2BEQ16778 126 aa9.18□□□□□ -0.94
SMN1-201ENST00000351205 Q1RN00 199 aa9.18□□□□□ -0.94
SMN1-201ENST00000351205 KRTAP19-2Q3LHN2 52 aa9.18□□□□□ -0.94
SMN1-201ENST00000351205 PCOTHQ58A44 107 aa9.18□□□□□ -0.94
SMN1-201ENST00000351205 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.18□□□□□ -0.94
SMN1-201ENST00000351205 HIST1H2BHQ93079 126 aa9.18□□□□□ -0.94
SMN1-201ENST00000351205 HIST1H2BNQ99877 126 aa9.18□□□□□ -0.94
SMN1-201ENST00000351205 HIST1H2BMQ99879 126 aa9.18□□□□□ -0.94
SMN1-201ENST00000351205 PET117Q6UWS5 81 aa9.17□□□□□ -0.94
SMN1-201ENST00000351205 LINC00518Q8N0U6 118 aa9.17□□□□□ -0.94
SMN1-201ENST00000351205 DEFB105AQ8NG35 78 aa9.16□□□□□ -0.94
SMN1-201ENST00000351205 CD164Q04900 197 aa9.15□□□□□ -0.94
SMN1-201ENST00000351205 TAL2Q16559 108 aa9.15□□□□□ -0.94
SMN1-201ENST00000351205 IGLV8-61A0A075B6I0 122 aa9.14□□□□□ -0.95
SMN1-201ENST00000351205 GHRHP01286 108 aa9.14□□□□□ -0.95
SMN1-201ENST00000351205 FSIP2Q5CZC0 6907 aa9.13□□□□□ -0.95
SMN1-201ENST00000351205 TEX49A0A1B0GTD5 131 aa9.13□□□□□ -0.95
SMN1-201ENST00000351205 PRO1933Q9H354 126 aa9.13□□□□□ -0.95
SMN1-201ENST00000351205 H7C2G1 150 aa9.12□□□□□ -0.95
SMN1-201ENST00000351205 C3orf79P0CE67 100 aa9.12□□□□□ -0.95
SMN1-201ENST00000351205 TRBV7-6A0A0J9YX20 115 aa9.11□□□□□ -0.95
SMN1-201ENST00000351205 MT1HP80294 61 aa9.11□□□□□ -0.95
SMN1-201ENST00000351205 SMIM29Q86T20 159 aa9.11□□□□□ -0.95
SMN1-201ENST00000351205 SCGB1D4Q6XE38 83 aa9.1□□□□□ -0.95
SMN1-201ENST00000351205 A0A1B0GWB2 263 aa9.09□□□□□ -0.95
SMN1-201ENST00000351205 Q5XG85 94 aa9.09□□□□□ -0.95
SMN1-201ENST00000351205 IGLV5-48A0A075B6I7 105 aa9.08□□□□□ -0.96
SMN1-201ENST00000351205 AKR1D1P51857 326 aa9.08□□□□□ -0.96
SMN1-201ENST00000351205 A0A0G2JQZ4 141 aa9.07□□□□□ -0.96
SMN1-201ENST00000351205 KRTDAPP60985 99 aa9.07□□□□□ -0.96
SMN1-201ENST00000351205 C1orf195Q5TG92 126 aa9.07□□□□□ -0.96
SMN1-201ENST00000351205 CRCT1Q9UGL9 99 aa9.07□□□□□ -0.96
SMN1-201ENST00000351205 A6NDN8 102 aa9.06□□□□□ -0.96
SMN1-201ENST00000351205 ANKRD39Q53RE8 183 aa9.06□□□□□ -0.96
SMN1-201ENST00000351205 COPS9Q8WXC6 57 aa9.06□□□□□ -0.96
SMN1-201ENST00000351205 IFITM1P13164 125 aa9.05□□□□□ -0.96
SMN1-201ENST00000351205 CFC1BP0CG36 223 aa9.03□□□□□ -0.96
SMN1-201ENST00000351205 MUSTN1Q8IVN3 82 aa9.03□□□□□ -0.96
SMN1-201ENST00000351205 COA6Q5JTJ3 125 aaKnown RBP9.02□□□□□ -0.97
SMN1-201ENST00000351205 Q6ZVH6 145 aa9.02□□□□□ -0.97
SMN1-201ENST00000351205 ATOH7Q8N100 152 aa9.02□□□□□ -0.97
SMN1-201ENST00000351205 C20orf202A1L168 122 aa9.01□□□□□ -0.97
SMN1-201ENST00000351205 A4D1N5 150 aa9.01□□□□□ -0.97
SMN1-201ENST00000351205 RPL37P61927 97 aaKnown RBP9.01□□□□□ -0.97
SMN1-201ENST00000351205 PCP2Q8IVA1 136 aa9.01□□□□□ -0.97
SMN1-201ENST00000351205 SMIM11BQ8TCY0 68 aa8.99□□□□□ -0.97
SMN1-201ENST00000351205 NHP2Q9NX24 153 aaKnown RBP8.99□□□□□ -0.97
SMN1-201ENST00000351205 FLGP20930 4061 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms