RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 PRB2P02812 416 aaPredicted RBP11.81□□□□□ -0.52
APP-202ENST00000348990 ATP5EP56381 51 aaPredicted RBP11.81□□□□□ -0.52
APP-202ENST00000348990 LINC00528Q8N1L1 170 aa11.81□□□□□ -0.52
APP-202ENST00000348990 EGFEM1PQ0D2K5 195 aa11.81□□□□□ -0.52
APP-202ENST00000348990 EPM2AB3EWF7 344 aa11.8□□□□□ -0.52
APP-202ENST00000348990 FAM229BQ4G0N7 80 aa11.8□□□□□ -0.52
APP-202ENST00000348990 Q8NAQ8 132 aa11.79□□□□□ -0.52
APP-202ENST00000348990 RPL37AP8A6NKH3 93 aa11.79□□□□□ -0.52
APP-202ENST00000348990 SMIM29Q86T20 159 aa11.77□□□□□ -0.53
APP-202ENST00000348990 Q6ZRP5 223 aa11.76□□□□□ -0.53
APP-202ENST00000348990 V9GYY9 64 aa11.76□□□□□ -0.53
APP-202ENST00000348990 KRTAP1-1Q07627 177 aa11.76□□□□□ -0.53
APP-202ENST00000348990 PRR4Q16378 134 aa11.76□□□□□ -0.53
APP-202ENST00000348990 KPRPQ5T749 579 aaPredicted RBP11.75□□□□□ -0.53
APP-202ENST00000348990 C1orf195Q5TG92 126 aa11.75□□□□□ -0.53
APP-202ENST00000348990 OCR1Q9BZK8 76 aa11.75□□□□□ -0.53
APP-202ENST00000348990 ESRGQ1W209 222 aa11.74□□□□□ -0.53
APP-202ENST00000348990 SYCNQ0VAF6 134 aa11.73□□□□□ -0.53
APP-202ENST00000348990 HECTD1Q9ULT8 2610 aa11.72□□□□□ -0.53
APP-202ENST00000348990 HELZ2Q9BYK8 2649 aaKnown RBP11.72□□□□□ -0.53
APP-202ENST00000348990 HIVEP1P15822 2718 aa11.72□□□□□ -0.53
APP-202ENST00000348990 RETNQ9HD89 108 aa11.71□□□□□ -0.53
APP-202ENST00000348990 ETDCA0A1B0GVM5 59 aa11.71□□□□□ -0.53
APP-202ENST00000348990 Q8N377 158 aa11.71□□□□□ -0.53
APP-202ENST00000348990 F8WDY8 70 aa11.7□□□□□ -0.54
APP-202ENST00000348990 C7orf33Q8WU49 177 aa11.7□□□□□ -0.54
APP-202ENST00000348990 ERC2-IT1O76042 136 aa11.7□□□□□ -0.54
APP-202ENST00000348990 SEC61GP60059 68 aa11.7□□□□□ -0.54
APP-202ENST00000348990 C15orf56Q8N910 161 aa11.7□□□□□ -0.54
APP-202ENST00000348990 TENM1Q9UKZ4 2725 aa11.69□□□□□ -0.54
APP-202ENST00000348990 C1orf137Q5JT78 98 aa11.69□□□□□ -0.54
APP-202ENST00000348990 SERTAD4-AS1Q5TG53 156 aa11.69□□□□□ -0.54
APP-202ENST00000348990 PKD1L1Q8TDX9 2849 aa11.69□□□□□ -0.54
APP-202ENST00000348990 ST20-AS1Q8NBB2 130 aa11.68□□□□□ -0.54
APP-202ENST00000348990 BAHCC1Q9P281 2608 aa11.67□□□□□ -0.54
APP-202ENST00000348990 UBE2BP63146 152 aa11.67□□□□□ -0.54
APP-202ENST00000348990 Q6ZTC4 211 aa11.67□□□□□ -0.54
APP-202ENST00000348990 DEFB116Q30KQ4 102 aa11.65□□□□□ -0.54
APP-202ENST00000348990 A0A1W2PNM2 257 aa11.64□□□□□ -0.55
APP-202ENST00000348990 FAM168BA1KXE4 195 aa11.63□□□□□ -0.55
APP-202ENST00000348990 A0A0G2JQZ4 141 aa11.62□□□□□ -0.55
APP-202ENST00000348990 A0A1W2PNN7 141 aa11.62□□□□□ -0.55
APP-202ENST00000348990 KCNQ1DNQ9H478 68 aa11.61□□□□□ -0.55
APP-202ENST00000348990 DHRS4-AS1Q9P1J3 65 aa11.61□□□□□ -0.55
APP-202ENST00000348990 PSPHP1O15172 72 aa11.61□□□□□ -0.55
APP-202ENST00000348990 K7EQZ3 153 aa11.6□□□□□ -0.55
APP-202ENST00000348990 WFDC13Q8IUB5 93 aa11.59□□□□□ -0.55
APP-202ENST00000348990 PDZD2O15018 2839 aa11.59□□□□□ -0.55
APP-202ENST00000348990 KRTAP26-1Q6PEX3 210 aa11.58□□□□□ -0.56
APP-202ENST00000348990 Q6ZRX8 168 aa11.58□□□□□ -0.56
APP-202ENST00000348990 IGLV5-48A0A075B6I7 105 aa11.58□□□□□ -0.56
APP-202ENST00000348990 INAFM1C9JVW0 142 aa11.58□□□□□ -0.56
APP-202ENST00000348990 Q8NBF4 154 aa11.57□□□□□ -0.56
APP-202ENST00000348990 C1orf64Q8NEQ6 169 aa11.57□□□□□ -0.56
APP-202ENST00000348990 Q9BRP9 147 aa11.56□□□□□ -0.56
APP-202ENST00000348990 TENM4Q6N022 2769 aa11.56□□□□□ -0.56
APP-202ENST00000348990 OXLD1Q5BKU9 147 aa11.55□□□□□ -0.56
APP-202ENST00000348990 DEFB131BA0A096LNP1 70 aa11.54□□□□□ -0.56
APP-202ENST00000348990 TRRAPQ9Y4A5 3859 aa11.53□□□□□ -0.56
APP-202ENST00000348990 hDV103S1A0JD37 113 aa11.52□□□□□ -0.56
APP-202ENST00000348990 DSCR10P59022 87 aa11.52□□□□□ -0.57
APP-202ENST00000348990 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.51□□□□□ -0.57
APP-202ENST00000348990 FLNBO75369 2602 aaKnown RBP11.51□□□□□ -0.57
APP-202ENST00000348990 NOTCH1P46531 2555 aa11.5□□□□□ -0.57
APP-202ENST00000348990 ANK3Q12955 4377 aaKnown RBP11.5□□□□□ -0.57
APP-202ENST00000348990 HCG22E2RYF7 251 aa11.5□□□□□ -0.57
APP-202ENST00000348990 TENM3Q9P273 2699 aa11.5□□□□□ -0.57
APP-202ENST00000348990 PSCAO43653 123 aa11.49□□□□□ -0.57
APP-202ENST00000348990 IGLV1-50A0A075B6I6 118 aa11.48□□□□□ -0.57
APP-202ENST00000348990 MP68P56378 58 aa11.48□□□□□ -0.57
APP-202ENST00000348990 LINC01556Q5JQF7 62 aa11.48□□□□□ -0.57
APP-202ENST00000348990 CASC10Q5T4H9 136 aa11.48□□□□□ -0.57
APP-202ENST00000348990 MAST4O15021 2626 aa11.47□□□□□ -0.57
APP-202ENST00000348990 LINC00208Q96KT6 92 aa11.47□□□□□ -0.57
APP-202ENST00000348990 A0A087WSZ3 146 aa11.47□□□□□ -0.57
APP-202ENST00000348990 IGKV2-24A0A0C4DH68 120 aa11.46□□□□□ -0.57
APP-202ENST00000348990 MRPL55Q7Z7F7 128 aaKnown RBP11.46□□□□□ -0.57
APP-202ENST00000348990 LINC00476Q8WZB0 136 aa11.46□□□□□ -0.57
APP-202ENST00000348990 C11orf45Q8TAV5 145 aa11.46□□□□□ -0.58
APP-202ENST00000348990 NSD1Q96L73 2696 aaPredicted RBP11.45□□□□□ -0.58
APP-202ENST00000348990 RPL37AP61513 92 aaKnown RBP11.45□□□□□ -0.58
APP-202ENST00000348990 PRLHP81277 87 aa11.44□□□□□ -0.58
APP-202ENST00000348990 OTOGQ6ZRI0 2925 aa11.43□□□□□ -0.58
APP-202ENST00000348990 H3BNG1 76 aa11.42□□□□□ -0.58
APP-202ENST00000348990 A0A1B0GW54 56 aa11.42□□□□□ -0.58
APP-202ENST00000348990 A0A096LNI7 61 aa11.41□□□□□ -0.58
APP-202ENST00000348990 TNP2Q05952 138 aa11.41□□□□□ -0.58
APP-202ENST00000348990 REG3GQ6UW15 175 aa11.41□□□□□ -0.58
APP-202ENST00000348990 TRAV22A0A0B4J277 110 aa11.41□□□□□ -0.58
APP-202ENST00000348990 SPRR4Q96PI1 79 aa11.41□□□□□ -0.58
APP-202ENST00000348990 PMAIP1Q13794 54 aa11.4□□□□□ -0.58
APP-202ENST00000348990 A8MUN3 132 aa11.39□□□□□ -0.59
APP-202ENST00000348990 STAB1Q9NY15 2570 aa11.38□□□□□ -0.59
APP-202ENST00000348990 KRTAP4-16G5E9R7 235 aaPredicted RBP11.38□□□□□ -0.59
APP-202ENST00000348990 IGFL1Q6UW32 110 aa11.38□□□□□ -0.59
APP-202ENST00000348990 COL6A5A8TX70 2615 aa11.37□□□□□ -0.59
APP-202ENST00000348990 NDUFB1O75438 58 aa11.37□□□□□ -0.59
APP-202ENST00000348990 ZCCHC13Q8WW36 166 aaKnown RBP11.36□□□□□ -0.59
APP-202ENST00000348990 Q1T7F1 81 aa11.35□□□□□ -0.59
APP-202ENST00000348990 UBE2AP49459 152 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms