RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 C7orf33Q8WU49 177 aa11.87□□□□□ -0.51
KRCC1-201ENST00000347055 SONP18583 2426 aaKnown RBP11.87□□□□□ -0.51
KRCC1-201ENST00000347055 NF1P21359 2839 aa11.86□□□□□ -0.51
KRCC1-201ENST00000347055 ZNF469Q96JG9 3925 aaPredicted RBP11.86□□□□□ -0.51
KRCC1-201ENST00000347055 SPRR1AP35321 89 aa11.85□□□□□ -0.51
KRCC1-201ENST00000347055 HIGD2AQ9BW72 106 aa11.84□□□□□ -0.51
KRCC1-201ENST00000347055 FLNAP21333 2647 aaKnown RBP11.84□□□□□ -0.51
KRCC1-201ENST00000347055 KRTAP4-16G5E9R7 235 aaPredicted RBP11.84□□□□□ -0.51
KRCC1-201ENST00000347055 FN1P02751 2386 aaKnown RBP11.83□□□□□ -0.51
KRCC1-201ENST00000347055 A0A1W2PNM2 257 aa11.83□□□□□ -0.52
KRCC1-201ENST00000347055 C1orf137Q5JT78 98 aa11.83□□□□□ -0.52
KRCC1-201ENST00000347055 SMIM29Q86T20 159 aa11.83□□□□□ -0.52
KRCC1-201ENST00000347055 ZCCHC13Q8WW36 166 aaKnown RBP11.82□□□□□ -0.52
KRCC1-201ENST00000347055 FAM229BQ4G0N7 80 aa11.82□□□□□ -0.52
KRCC1-201ENST00000347055 ETDCA0A1B0GVM5 59 aa11.8□□□□□ -0.52
KRCC1-201ENST00000347055 hDV103S1A0JD37 113 aa11.8□□□□□ -0.52
KRCC1-201ENST00000347055 SERTAD4-AS1Q5TG53 156 aa11.8□□□□□ -0.52
KRCC1-201ENST00000347055 DEFB105AQ8NG35 78 aa11.8□□□□□ -0.52
KRCC1-201ENST00000347055 GCN1Q92616 2671 aaKnown RBP11.79□□□□□ -0.52
KRCC1-201ENST00000347055 IGLV1-50A0A075B6I6 118 aa11.79□□□□□ -0.52
KRCC1-201ENST00000347055 BRK1Q8WUW1 75 aa11.78□□□□□ -0.52
KRCC1-201ENST00000347055 IGKV2D-24A0A075B6R9 120 aa11.77□□□□□ -0.52
KRCC1-201ENST00000347055 Q9BRP9 147 aa11.77□□□□□ -0.53
KRCC1-201ENST00000347055 FAM30AQ9NZY2 134 aa11.77□□□□□ -0.53
KRCC1-201ENST00000347055 Q1T7F1 81 aa11.76□□□□□ -0.53
KRCC1-201ENST00000347055 CYP4F30PQ9H0H9 118 aa11.76□□□□□ -0.53
KRCC1-201ENST00000347055 DSCR10P59022 87 aa11.75□□□□□ -0.53
KRCC1-201ENST00000347055 ZFYVE26Q68DK2 2539 aa11.75□□□□□ -0.53
KRCC1-201ENST00000347055 NDUFB1O75438 58 aa11.74□□□□□ -0.53
KRCC1-201ENST00000347055 DNAH10OSP0CZ25 163 aa11.74□□□□□ -0.53
KRCC1-201ENST00000347055 MPLKIPQ8TAP9 179 aa11.74□□□□□ -0.53
KRCC1-201ENST00000347055 USP24Q9UPU5 2620 aa11.74□□□□□ -0.53
KRCC1-201ENST00000347055 CUBNO60494 3623 aa11.74□□□□□ -0.53
KRCC1-201ENST00000347055 HCG22E2RYF7 251 aa11.71□□□□□ -0.54
KRCC1-201ENST00000347055 PDZD2O15018 2839 aa11.71□□□□□ -0.54
KRCC1-201ENST00000347055 SETD2Q9BYW2 2564 aaPredicted RBP11.69□□□□□ -0.54
KRCC1-201ENST00000347055 CCDC168Q8NDH2 2452 aa11.69□□□□□ -0.54
KRCC1-201ENST00000347055 NBEAL2Q6ZNJ1 2754 aa11.68□□□□□ -0.54
KRCC1-201ENST00000347055 K7EQZ3 153 aa11.67□□□□□ -0.54
KRCC1-201ENST00000347055 C1orf64Q8NEQ6 169 aa11.67□□□□□ -0.54
KRCC1-201ENST00000347055 C1orf195Q5TG92 126 aa11.67□□□□□ -0.54
KRCC1-201ENST00000347055 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.66□□□□□ -0.54
KRCC1-201ENST00000347055 MRPL55Q7Z7F7 128 aaKnown RBP11.66□□□□□ -0.54
KRCC1-201ENST00000347055 PRR15Q8IV56 129 aa11.66□□□□□ -0.54
KRCC1-201ENST00000347055 PKIGQ9Y2B9 76 aa11.66□□□□□ -0.54
KRCC1-201ENST00000347055 IGLV8-61A0A075B6I0 122 aa11.65□□□□□ -0.54
KRCC1-201ENST00000347055 ST20-AS1Q8NBB2 130 aa11.65□□□□□ -0.54
KRCC1-201ENST00000347055 SMR3AQ99954 134 aa11.65□□□□□ -0.54
KRCC1-201ENST00000347055 V9GYY9 64 aa11.65□□□□□ -0.54
KRCC1-201ENST00000347055 RPL37AP8A6NKH3 93 aa11.64□□□□□ -0.55
KRCC1-201ENST00000347055 H3BPC8 53 aa11.64□□□□□ -0.55
KRCC1-201ENST00000347055 DEFB131BA0A096LNP1 70 aa11.63□□□□□ -0.55
KRCC1-201ENST00000347055 REG3GQ6UW15 175 aa11.62□□□□□ -0.55
KRCC1-201ENST00000347055 LINC00476Q8WZB0 136 aa11.62□□□□□ -0.55
KRCC1-201ENST00000347055 HIVEP2P31629 2446 aa11.62□□□□□ -0.55
KRCC1-201ENST00000347055 PSCAO43653 123 aa11.62□□□□□ -0.55
KRCC1-201ENST00000347055 MP68P56378 58 aa11.62□□□□□ -0.55
KRCC1-201ENST00000347055 UBE2BP63146 152 aa11.62□□□□□ -0.55
KRCC1-201ENST00000347055 KRTAP7-1Q8IUC3 87 aa11.6□□□□□ -0.55
KRCC1-201ENST00000347055 FAM168BA1KXE4 195 aa11.59□□□□□ -0.55
KRCC1-201ENST00000347055 RETNQ9HD89 108 aa11.59□□□□□ -0.55
KRCC1-201ENST00000347055 SPANXA2-OT1Q8N9U9 137 aa11.59□□□□□ -0.55
KRCC1-201ENST00000347055 MTORP42345 2549 aa11.59□□□□□ -0.55
KRCC1-201ENST00000347055 C11orf45Q8TAV5 145 aa11.57□□□□□ -0.56
KRCC1-201ENST00000347055 IGFL1Q6UW32 110 aa11.56□□□□□ -0.56
KRCC1-201ENST00000347055 TRAV22A0A0B4J277 110 aa11.56□□□□□ -0.56
KRCC1-201ENST00000347055 INAFM1C9JVW0 142 aa11.55□□□□□ -0.56
KRCC1-201ENST00000347055 J3QKU1 62 aa11.54□□□□□ -0.56
KRCC1-201ENST00000347055 LINC00588Q9Y4M8 146 aa11.54□□□□□ -0.56
KRCC1-201ENST00000347055 ACANP16112 2415 aa11.54□□□□□ -0.56
KRCC1-201ENST00000347055 KRTAP29-1A8MX34 341 aaPredicted RBP11.52□□□□□ -0.57
KRCC1-201ENST00000347055 VWFP04275 2813 aa11.5□□□□□ -0.57
KRCC1-201ENST00000347055 KRTAP10-11P60412 298 aa11.49□□□□□ -0.57
KRCC1-201ENST00000347055 B9D2Q9BPU9 175 aa11.49□□□□□ -0.57
KRCC1-201ENST00000347055 HIVEP1P15822 2718 aa11.48□□□□□ -0.57
KRCC1-201ENST00000347055 SPRR1BP22528 89 aa11.47□□□□□ -0.57
KRCC1-201ENST00000347055 A0A087WSZ3 146 aa11.46□□□□□ -0.58
KRCC1-201ENST00000347055 H0Y9J4 135 aa11.45□□□□□ -0.58
KRCC1-201ENST00000347055 C16orf90A8MZG2 172 aa11.44□□□□□ -0.58
KRCC1-201ENST00000347055 CASC10Q5T4H9 136 aa11.44□□□□□ -0.58
KRCC1-201ENST00000347055 WFDC13Q8IUB5 93 aa11.44□□□□□ -0.58
KRCC1-201ENST00000347055 LIMD2Q9BT23 127 aa11.44□□□□□ -0.58
KRCC1-201ENST00000347055 LRCOL1A6NCL2 159 aa11.43□□□□□ -0.58
KRCC1-201ENST00000347055 OXLD1Q5BKU9 147 aa11.43□□□□□ -0.58
KRCC1-201ENST00000347055 CASC2Q6XLA1 102 aa11.43□□□□□ -0.58
KRCC1-201ENST00000347055 LINC00208Q96KT6 92 aa11.43□□□□□ -0.58
KRCC1-201ENST00000347055 A8MWP4 228 aa11.42□□□□□ -0.58
KRCC1-201ENST00000347055 H0Y9P7 68 aa11.42□□□□□ -0.58
KRCC1-201ENST00000347055 CNBPP62633 177 aaKnown RBP11.41□□□□□ -0.58
KRCC1-201ENST00000347055 UBE2AP49459 152 aa11.41□□□□□ -0.58
KRCC1-201ENST00000347055 TENM4Q6N022 2769 aa11.41□□□□□ -0.58
KRCC1-201ENST00000347055 NOTCH2Q04721 2471 aa11.4□□□□□ -0.58
KRCC1-201ENST00000347055 PSPHP1O15172 72 aa11.39□□□□□ -0.59
KRCC1-201ENST00000347055 PMAIP1Q13794 54 aa11.39□□□□□ -0.59
KRCC1-201ENST00000347055 C9orf163Q8N9P6 203 aa11.38□□□□□ -0.59
KRCC1-201ENST00000347055 LINC00472Q9H8W2 130 aa11.38□□□□□ -0.59
KRCC1-201ENST00000347055 PRLHP81277 87 aa11.36□□□□□ -0.59
KRCC1-201ENST00000347055 PRR4Q16378 134 aa11.36□□□□□ -0.59
KRCC1-201ENST00000347055 DNAH1Q9P2D7 4330 aa11.35□□□□□ -0.59
KRCC1-201ENST00000347055 A0A096LNI7 61 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms