RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 C20orf197Q8N268 126 aa8.79□□□□□ -1
CASC4-202ENST00000345795 C22orf24Q9Y442 160 aa8.78□□□□□ -1
CASC4-202ENST00000345795 LINC00167Q96N53 147 aa8.77□□□□□ -1
CASC4-202ENST00000345795 SNURFQ9Y675 71 aa8.77□□□□□ -1
CASC4-202ENST00000345795 FAM19A3Q7Z5A8 133 aa8.76□□□□□ -1.01
CASC4-202ENST00000345795 COL7A1Q02388 2944 aa8.76□□□□□ -1.01
CASC4-202ENST00000345795 NDUFC2O95298 119 aa8.75□□□□□ -1.01
CASC4-202ENST00000345795 IGLV9-49A0A0B4J1Y8 123 aa8.75□□□□□ -1.01
CASC4-202ENST00000345795 VPREB1P12018 145 aa8.75□□□□□ -1.01
CASC4-202ENST00000345795 PHF5AQ7RTV0 110 aaKnown RBP8.74□□□□□ -1.01
CASC4-202ENST00000345795 MRPL55Q7Z7F7 128 aaKnown RBP8.73□□□□□ -1.01
CASC4-202ENST00000345795 PRR4Q16378 134 aa8.71□□□□□ -1.01
CASC4-202ENST00000345795 BPY2O14599 106 aa8.71□□□□□ -1.02
CASC4-202ENST00000345795 LOC107984640A0A0U1RRK4 108 aa8.71□□□□□ -1.02
CASC4-202ENST00000345795 MUC7Q8TAX7 377 aa8.71□□□□□ -1.02
CASC4-202ENST00000345795 KRTAP1-5Q9BYS1 174 aa8.7□□□□□ -1.02
CASC4-202ENST00000345795 WFDC13Q8IUB5 93 aa8.69□□□□□ -1.02
CASC4-202ENST00000345795 Q6ZVQ6 151 aa8.69□□□□□ -1.02
CASC4-202ENST00000345795 IGLV6-57P01721 117 aa8.68□□□□□ -1.02
CASC4-202ENST00000345795 ERC2-IT1O76042 136 aa8.68□□□□□ -1.02
CASC4-202ENST00000345795 FAM240AA0A1B0GVK7 77 aa8.67□□□□□ -1.02
CASC4-202ENST00000345795 SPINK6Q6UWN8 80 aa8.67□□□□□ -1.02
CASC4-202ENST00000345795 LINC01561Q8N1V8 128 aa8.67□□□□□ -1.02
CASC4-202ENST00000345795 C2orf48Q96LS8 159 aa8.67□□□□□ -1.02
CASC4-202ENST00000345795 C1orf137Q5JT78 98 aa8.67□□□□□ -1.02
CASC4-202ENST00000345795 REG3GQ6UW15 175 aa8.66□□□□□ -1.02
CASC4-202ENST00000345795 H0Y9J4 135 aa8.66□□□□□ -1.02
CASC4-202ENST00000345795 ATOX1O00244 68 aa8.66□□□□□ -1.02
CASC4-202ENST00000345795 NHLRC4P0CG21 123 aaPredicted RBP8.66□□□□□ -1.02
CASC4-202ENST00000345795 TM2D3Q9BRN9 247 aa8.66□□□□□ -1.02
CASC4-202ENST00000345795 ANAPC11Q9NYG5 84 aa8.66□□□□□ -1.02
CASC4-202ENST00000345795 Q6JHZ5 121 aa8.65□□□□□ -1.02
CASC4-202ENST00000345795 A0A087WSZ3 146 aa8.64□□□□□ -1.03
CASC4-202ENST00000345795 NDUFS5O43920 106 aa8.64□□□□□ -1.03
CASC4-202ENST00000345795 LINC01547P58512 204 aaPredicted RBP8.64□□□□□ -1.03
CASC4-202ENST00000345795 ELOF1P60002 83 aaKnown RBP8.64□□□□□ -1.03
CASC4-202ENST00000345795 GVQW2A0A096LPI5 108 aaPredicted RBP8.64□□□□□ -1.03
CASC4-202ENST00000345795 FAM30AQ9NZY2 134 aa8.64□□□□□ -1.03
CASC4-202ENST00000345795 H3BNG1 76 aa8.63□□□□□ -1.03
CASC4-202ENST00000345795 Q6ZQT0 140 aa8.61□□□□□ -1.03
CASC4-202ENST00000345795 NBDYA0A0U1RRE5 68 aa8.58□□□□□ -1.04
CASC4-202ENST00000345795 WIPF1O43516 503 aa8.58□□□□□ -1.04
CASC4-202ENST00000345795 RPL37AP61513 92 aaKnown RBP8.58□□□□□ -1.04
CASC4-202ENST00000345795 LINC00528Q8N1L1 170 aa8.58□□□□□ -1.04
CASC4-202ENST00000345795 Q9BRP9 147 aa8.58□□□□□ -1.04
CASC4-202ENST00000345795 UQCRQO14949 82 aa8.58□□□□□ -1.04
CASC4-202ENST00000345795 Q6ZRX8 168 aa8.57□□□□□ -1.04
CASC4-202ENST00000345795 DHRS4-AS1Q9P1J3 65 aa8.57□□□□□ -1.04
CASC4-202ENST00000345795 NUPR2A6NF83 97 aa8.57□□□□□ -1.04
CASC4-202ENST00000345795 Q8N377 158 aa8.57□□□□□ -1.04
CASC4-202ENST00000345795 TRBV7-7A0A0K0K1E9 115 aa8.56□□□□□ -1.04
CASC4-202ENST00000345795 COX7CP15954 63 aa8.56□□□□□ -1.04
CASC4-202ENST00000345795 B9D2Q9BPU9 175 aa8.56□□□□□ -1.04
CASC4-202ENST00000345795 KRTAP26-1Q6PEX3 210 aa8.56□□□□□ -1.04
CASC4-202ENST00000345795 IGLV5-52A0A0A0MRZ9 124 aa8.55□□□□□ -1.04
CASC4-202ENST00000345795 EPM2AB3EWF7 344 aa8.55□□□□□ -1.04
CASC4-202ENST00000345795 C14orf177Q52M58 125 aa8.55□□□□□ -1.04
CASC4-202ENST00000345795 SERP2Q8N6R1 65 aa8.55□□□□□ -1.04
CASC4-202ENST00000345795 CDK2AP2O75956 126 aa8.53□□□□□ -1.04
CASC4-202ENST00000345795 IGLV1-50A0A075B6I6 118 aa8.53□□□□□ -1.04
CASC4-202ENST00000345795 PDE6GP18545 87 aa8.52□□□□□ -1.04
CASC4-202ENST00000345795 Q6Q795 121 aa8.52□□□□□ -1.04
CASC4-202ENST00000345795 IMUPQ9GZP8 106 aa8.52□□□□□ -1.04
CASC4-202ENST00000345795 LINC00476Q8WZB0 136 aa8.52□□□□□ -1.05
CASC4-202ENST00000345795 APLNQ9ULZ1 77 aa8.51□□□□□ -1.05
CASC4-202ENST00000345795 FBN3Q75N90 2809 aa8.51□□□□□ -1.05
CASC4-202ENST00000345795 CIRBP-AS1Q8TBR5 109 aa8.51□□□□□ -1.05
CASC4-202ENST00000345795 PANO1I0J062 215 aa8.49□□□□□ -1.05
CASC4-202ENST00000345795 RETNLBQ9BQ08 111 aa8.49□□□□□ -1.05
CASC4-202ENST00000345795 C1orf134Q5TEV5 83 aa8.49□□□□□ -1.05
CASC4-202ENST00000345795 KCNQ1DNQ9H478 68 aa8.49□□□□□ -1.05
CASC4-202ENST00000345795 C16orf90A8MZG2 172 aa8.48□□□□□ -1.05
CASC4-202ENST00000345795 PRYO14603 147 aa8.48□□□□□ -1.05
CASC4-202ENST00000345795 CYSTM1Q9H1C7 97 aa8.48□□□□□ -1.05
CASC4-202ENST00000345795 SMIM29Q86T20 159 aa8.48□□□□□ -1.05
CASC4-202ENST00000345795 MPLKIPQ8TAP9 179 aa8.47□□□□□ -1.05
CASC4-202ENST00000345795 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.47□□□□□ -1.05
CASC4-202ENST00000345795 RTL8CO15255 209 aa8.47□□□□□ -1.05
CASC4-202ENST00000345795 ANK2Q01484 3957 aa8.46□□□□□ -1.06
CASC4-202ENST00000345795 MOBPQ13875 183 aa8.45□□□□□ -1.06
CASC4-202ENST00000345795 K7EQZ3 153 aa8.44□□□□□ -1.06
CASC4-202ENST00000345795 A0A1W2PNM2 257 aa8.43□□□□□ -1.06
CASC4-202ENST00000345795 ATP5EP2Q5VTU8 51 aa8.43□□□□□ -1.06
CASC4-202ENST00000345795 FLG2Q5D862 2391 aaPredicted RBP8.43□□□□□ -1.06
CASC4-202ENST00000345795 OBSCN-AS1Q96MR7 158 aa8.43□□□□□ -1.06
CASC4-202ENST00000345795 IGHV6-1A0A0B4J1U7 121 aa8.42□□□□□ -1.06
CASC4-202ENST00000345795 KRTAP11-1Q8IUC1 163 aa8.41□□□□□ -1.06
CASC4-202ENST00000345795 DMBT1Q9UGM3 2413 aaPredicted RBP8.41□□□□□ -1.06
CASC4-202ENST00000345795 IGKV4-1P06312 121 aa8.41□□□□□ -1.06
CASC4-202ENST00000345795 TRBV7-4A0A0J9YYF1 115 aa8.4□□□□□ -1.06
CASC4-202ENST00000345795 TNP2Q05952 138 aa8.4□□□□□ -1.06
CASC4-202ENST00000345795 IGFL1Q6UW32 110 aa8.4□□□□□ -1.06
CASC4-202ENST00000345795 KRTAP7-1Q8IUC3 87 aa8.4□□□□□ -1.07
CASC4-202ENST00000345795 A0A087WTM6 91 aa8.39□□□□□ -1.07
CASC4-202ENST00000345795 LOC110117498A0A087WWA1 95 aa8.39□□□□□ -1.07
CASC4-202ENST00000345795 Q8NBF4 154 aa8.39□□□□□ -1.07
CASC4-202ENST00000345795 C9orf163Q8N9P6 203 aa8.39□□□□□ -1.07
CASC4-202ENST00000345795 H3BQ85 93 aa8.38□□□□□ -1.07
CASC4-202ENST00000345795 NDUFB1O75438 58 aa8.38□□□□□ -1.07
CASC4-202ENST00000345795 SMR3BP02814 79 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms