RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 A0A1W2PPM0 123 aa12.7□□□□□ -0.38
SMARCB1-202ENST00000344921 REG3GQ6UW15 175 aa12.7□□□□□ -0.38
SMARCB1-202ENST00000344921 NDUFC2O95298 119 aa12.69□□□□□ -0.38
SMARCB1-202ENST00000344921 DIRC1Q969H9 104 aa12.69□□□□□ -0.38
SMARCB1-202ENST00000344921 SPANXB1Q9NS25 103 aaPredicted RBP12.69□□□□□ -0.38
SMARCB1-202ENST00000344921 H3BUT2 72 aa12.68□□□□□ -0.38
SMARCB1-202ENST00000344921 J3QL48 77 aa12.68□□□□□ -0.38
SMARCB1-202ENST00000344921 ZNF861PO60384 105 aa12.68□□□□□ -0.38
SMARCB1-202ENST00000344921 FABP2P12104 132 aa12.68□□□□□ -0.38
SMARCB1-202ENST00000344921 TMEM126AQ9H061 195 aa12.68□□□□□ -0.38
SMARCB1-202ENST00000344921 OXTP01178 125 aa12.68□□□□□ -0.38
SMARCB1-202ENST00000344921 UBE2AP49459 152 aa12.68□□□□□ -0.38
SMARCB1-202ENST00000344921 SPANXDQ9BXN6 97 aa12.68□□□□□ -0.38
SMARCB1-202ENST00000344921 SPANXCQ9NY87 97 aa12.68□□□□□ -0.38
SMARCB1-202ENST00000344921 TRBV10-2A0A0K0K1G8 114 aa12.67□□□□□ -0.38
SMARCB1-202ENST00000344921 KRTAP29-1A8MX34 341 aaPredicted RBP12.67□□□□□ -0.38
SMARCB1-202ENST00000344921 RPL28P46779 137 aaKnown RBP12.67□□□□□ -0.38
SMARCB1-202ENST00000344921 TRBV10-3A0A0K0K1G6 114 aa12.66□□□□□ -0.38
SMARCB1-202ENST00000344921 S100A7L2Q5SY68 101 aa12.66□□□□□ -0.38
SMARCB1-202ENST00000344921 FAM19A1Q7Z5A9 133 aa12.65□□□□□ -0.38
SMARCB1-202ENST00000344921 COPS9Q8WXC6 57 aa12.65□□□□□ -0.38
SMARCB1-202ENST00000344921 SPCS1Q9Y6A9 102 aa12.65□□□□□ -0.38
SMARCB1-202ENST00000344921 LRP1Q07954 4544 aaKnown RBP12.64□□□□□ -0.39
SMARCB1-202ENST00000344921 H0Y9J4 135 aa12.64□□□□□ -0.39
SMARCB1-202ENST00000344921 PRYO14603 147 aa12.62□□□□□ -0.39
SMARCB1-202ENST00000344921 IFITM1P13164 125 aa12.62□□□□□ -0.39
SMARCB1-202ENST00000344921 CEND1Q8N111 149 aa12.62□□□□□ -0.39
SMARCB1-202ENST00000344921 PRLHP81277 87 aa12.62□□□□□ -0.39
SMARCB1-202ENST00000344921 KCNQ1DNQ9H478 68 aa12.62□□□□□ -0.39
SMARCB1-202ENST00000344921 MUSTN1Q8IVN3 82 aa12.6□□□□□ -0.39
SMARCB1-202ENST00000344921 OR13C6PQ8NH95 151 aa12.6□□□□□ -0.39
SMARCB1-202ENST00000344921 FXYD2P54710 66 aa12.59□□□□□ -0.39
SMARCB1-202ENST00000344921 FAT3Q8TDW7 4589 aa12.59□□□□□ -0.39
SMARCB1-202ENST00000344921 IGLV6-57P01721 117 aa12.58□□□□□ -0.4
SMARCB1-202ENST00000344921 RAB37Q96AX2 223 aa12.58□□□□□ -0.4
SMARCB1-202ENST00000344921 ETDCA0A1B0GVM5 59 aa12.57□□□□□ -0.4
SMARCB1-202ENST00000344921 LINC01600Q96MT4 127 aa12.57□□□□□ -0.4
SMARCB1-202ENST00000344921 KRTAP13-1Q8IUC0 172 aa12.57□□□□□ -0.4
SMARCB1-202ENST00000344921 F8W1H4 67 aa12.56□□□□□ -0.4
SMARCB1-202ENST00000344921 TRAV23DV6A0A075B6W5 121 aa12.55□□□□□ -0.4
SMARCB1-202ENST00000344921 A0A1B0GWB2 263 aa12.55□□□□□ -0.4
SMARCB1-202ENST00000344921 LINC00337Q8N6G1 96 aa12.55□□□□□ -0.4
SMARCB1-202ENST00000344921 PPDPFQ9H3Y8 114 aa12.55□□□□□ -0.4
SMARCB1-202ENST00000344921 DMBT1Q9UGM3 2413 aaPredicted RBP12.54□□□□□ -0.4
SMARCB1-202ENST00000344921 SPRR1AP35321 89 aa12.54□□□□□ -0.4
SMARCB1-202ENST00000344921 HIGD2AQ9BW72 106 aa12.54□□□□□ -0.4
SMARCB1-202ENST00000344921 J3QR89 54 aa12.54□□□□□ -0.4
SMARCB1-202ENST00000344921 HIST1H4GQ99525 98 aa12.53□□□□□ -0.4
SMARCB1-202ENST00000344921 NHP2Q9NX24 153 aaKnown RBP12.53□□□□□ -0.4
SMARCB1-202ENST00000344921 KRTAP4-16G5E9R7 235 aaPredicted RBP12.51□□□□□ -0.41
SMARCB1-202ENST00000344921 NAA38Q9BRA0 125 aaKnown RBP12.51□□□□□ -0.41
SMARCB1-202ENST00000344921 ZNF73O43830 326 aaPredicted RBP12.5□□□□□ -0.41
SMARCB1-202ENST00000344921 SCGB1A1P11684 91 aa12.5□□□□□ -0.41
SMARCB1-202ENST00000344921 TMEM238LA0A1B0GVL6 79 aa12.49□□□□□ -0.41
SMARCB1-202ENST00000344921 A6NJY4 79 aa12.49□□□□□ -0.41
SMARCB1-202ENST00000344921 KRTAP1-4P0C5Y4 121 aa12.49□□□□□ -0.41
SMARCB1-202ENST00000344921 MT1HL1P0DM35 61 aa12.49□□□□□ -0.41
SMARCB1-202ENST00000344921 B5MCH6 92 aa12.48□□□□□ -0.41
SMARCB1-202ENST00000344921 PRR26Q8N8Z3 221 aa12.47□□□□□ -0.41
SMARCB1-202ENST00000344921 A4D1N5 150 aa12.46□□□□□ -0.41
SMARCB1-202ENST00000344921 K7ERJ3 54 aa12.46□□□□□ -0.41
SMARCB1-202ENST00000344921 TRAV13-2A0A0B4J235 113 aa12.45□□□□□ -0.42
SMARCB1-202ENST00000344921 Q6ZRX8 168 aa12.45□□□□□ -0.42
SMARCB1-202ENST00000344921 SMCR5Q8TEV8 140 aa12.44□□□□□ -0.42
SMARCB1-202ENST00000344921 KRTAP10-8P60410 259 aa12.43□□□□□ -0.42
SMARCB1-202ENST00000344921 LYRM7Q5U5X0 104 aa12.43□□□□□ -0.42
SMARCB1-202ENST00000344921 ANAPC11Q9NYG5 84 aa12.42□□□□□ -0.42
SMARCB1-202ENST00000344921 C6orf99Q4VX62 202 aa12.41□□□□□ -0.42
SMARCB1-202ENST00000344921 RPL13AP40429 203 aaKnown RBP12.4□□□□□ -0.42
SMARCB1-202ENST00000344921 Q9BRP9 147 aa12.4□□□□□ -0.42
SMARCB1-202ENST00000344921 ZNF706Q9Y5V0 76 aaPredicted RBP12.4□□□□□ -0.42
SMARCB1-202ENST00000344921 SIGMAR1Q99720 223 aa12.4□□□□□ -0.43
SMARCB1-202ENST00000344921 PRO0461Q9UI25 63 aa12.4□□□□□ -0.43
SMARCB1-202ENST00000344921 CRYGAP11844 174 aa12.39□□□□□ -0.43
SMARCB1-202ENST00000344921 TNXBP22105 4242 aa12.38□□□□□ -0.43
SMARCB1-202ENST00000344921 HERC1Q15751 4861 aa12.38□□□□□ -0.43
SMARCB1-202ENST00000344921 SPRR4Q96PI1 79 aa12.37□□□□□ -0.43
SMARCB1-202ENST00000344921 A0A087X002 238 aa12.37□□□□□ -0.43
SMARCB1-202ENST00000344921 H3BMG7 143 aa12.37□□□□□ -0.43
SMARCB1-202ENST00000344921 COX7BP24311 80 aa12.37□□□□□ -0.43
SMARCB1-202ENST00000344921 ERC2-IT1O76042 136 aa12.36□□□□□ -0.43
SMARCB1-202ENST00000344921 FAM229BQ4G0N7 80 aa12.35□□□□□ -0.43
SMARCB1-202ENST00000344921 SMIM11BQ8TCY0 68 aa12.35□□□□□ -0.43
SMARCB1-202ENST00000344921 ELOF1P60002 83 aaKnown RBP12.34□□□□□ -0.43
SMARCB1-202ENST00000344921 TRBV20-1A0A075B6N2 111 aa12.34□□□□□ -0.43
SMARCB1-202ENST00000344921 GAGE2AQ6NT46 116 aa12.33□□□□□ -0.44
SMARCB1-202ENST00000344921 TYMSOSQ8TAI1 123 aa12.33□□□□□ -0.44
SMARCB1-202ENST00000344921 DHRS4-AS1Q9P1J3 65 aa12.33□□□□□ -0.44
SMARCB1-202ENST00000344921 TRBV7-6A0A0J9YX20 115 aa12.32□□□□□ -0.44
SMARCB1-202ENST00000344921 ETDBQ3ZM63 59 aa12.31□□□□□ -0.44
SMARCB1-202ENST00000344921 CFC1BP0CG36 223 aa12.3□□□□□ -0.44
SMARCB1-202ENST00000344921 CFC1P0CG37 223 aa12.3□□□□□ -0.44
SMARCB1-202ENST00000344921 H7C2G1 150 aa12.28□□□□□ -0.44
SMARCB1-202ENST00000344921 TSPAN13O95857 204 aa12.28□□□□□ -0.44
SMARCB1-202ENST00000344921 KRTAP13-2Q52LG2 175 aa12.28□□□□□ -0.44
SMARCB1-202ENST00000344921 A0A0B4J2C4 111 aa12.26□□□□□ -0.45
SMARCB1-202ENST00000344921 ST20-AS1Q8NBB2 130 aa12.26□□□□□ -0.45
SMARCB1-202ENST00000344921 LINC00483Q53H64 154 aa12.25□□□□□ -0.45
SMARCB1-202ENST00000344921 C3orf22Q8N5N4 141 aa12.25□□□□□ -0.45
SMARCB1-202ENST00000344921 A0A1B0GV72 72 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms