RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 FAT3Q8TDW7 4589 aa8.62□□□□□ -1.03
TPM4-202ENST00000344824 GAGE10A6NGK3 116 aa8.62□□□□□ -1.03
TPM4-202ENST00000344824 SNHG12Q9BXW3 62 aa8.62□□□□□ -1.03
TPM4-202ENST00000344824 PLA2G2DQ9UNK4 145 aa8.62□□□□□ -1.03
TPM4-202ENST00000344824 A6NDN8 102 aa8.61□□□□□ -1.03
TPM4-202ENST00000344824 M0QXV9 152 aa8.61□□□□□ -1.03
TPM4-202ENST00000344824 LINC00337Q8N6G1 96 aa8.61□□□□□ -1.03
TPM4-202ENST00000344824 C22orf24Q9Y442 160 aa8.61□□□□□ -1.03
TPM4-202ENST00000344824 H7C2G1 150 aa8.6□□□□□ -1.03
TPM4-202ENST00000344824 S100A7L2Q5SY68 101 aa8.6□□□□□ -1.03
TPM4-202ENST00000344824 A0A0B4J2C4 111 aa8.59□□□□□ -1.03
TPM4-202ENST00000344824 M0R378 163 aa8.59□□□□□ -1.03
TPM4-202ENST00000344824 RPL13AP40429 203 aaKnown RBP8.59□□□□□ -1.03
TPM4-202ENST00000344824 PHF5AQ7RTV0 110 aaKnown RBP8.59□□□□□ -1.03
TPM4-202ENST00000344824 IGLV5-37A0A075B6J1 123 aa8.58□□□□□ -1.04
TPM4-202ENST00000344824 TRAV13-2A0A0B4J235 113 aa8.58□□□□□ -1.04
TPM4-202ENST00000344824 TRBV10-2A0A0K0K1G8 114 aa8.57□□□□□ -1.04
TPM4-202ENST00000344824 RPL37AP8A6NKH3 93 aa8.57□□□□□ -1.04
TPM4-202ENST00000344824 MRPL55Q7Z7F7 128 aaKnown RBP8.57□□□□□ -1.04
TPM4-202ENST00000344824 LINC00167Q96N53 147 aa8.57□□□□□ -1.04
TPM4-202ENST00000344824 TRBV10-3A0A0K0K1G6 114 aa8.56□□□□□ -1.04
TPM4-202ENST00000344824 A0A1B0GWB2 263 aa8.56□□□□□ -1.04
TPM4-202ENST00000344824 KRTAP29-1A8MX34 341 aaPredicted RBP8.56□□□□□ -1.04
TPM4-202ENST00000344824 Q1RN00 199 aa8.56□□□□□ -1.04
TPM4-202ENST00000344824 PRO1854Q9UHT4 67 aa8.56□□□□□ -1.04
TPM4-202ENST00000344824 UBE2BP63146 152 aa8.55□□□□□ -1.04
TPM4-202ENST00000344824 LBHQ53QV2 105 aaPredicted RBP8.54□□□□□ -1.04
TPM4-202ENST00000344824 OXTP01178 125 aa8.54□□□□□ -1.04
TPM4-202ENST00000344824 NAA38Q9BRA0 125 aaKnown RBP8.54□□□□□ -1.04
TPM4-202ENST00000344824 TMEM126AQ9H061 195 aa8.54□□□□□ -1.04
TPM4-202ENST00000344824 IGLV6-57P01721 117 aa8.53□□□□□ -1.04
TPM4-202ENST00000344824 TSPAN13O95857 204 aa8.52□□□□□ -1.05
TPM4-202ENST00000344824 COL5A1-AS1Q5SY13 56 aa8.52□□□□□ -1.05
TPM4-202ENST00000344824 SMIM11BQ8TCY0 68 aa8.52□□□□□ -1.05
TPM4-202ENST00000344824 IGLV1-50A0A075B6I6 118 aa8.51□□□□□ -1.05
TPM4-202ENST00000344824 TRAV23DV6A0A075B6W5 121 aa8.51□□□□□ -1.05
TPM4-202ENST00000344824 C1orf137Q5JT78 98 aa8.51□□□□□ -1.05
TPM4-202ENST00000344824 PSORS1C2Q9UIG4 136 aa8.51□□□□□ -1.05
TPM4-202ENST00000344824 TAX1BP3O14907 124 aa8.5□□□□□ -1.05
TPM4-202ENST00000344824 PSMB2P49721 201 aa8.5□□□□□ -1.05
TPM4-202ENST00000344824 KRTAP11-1Q8IUC1 163 aa8.5□□□□□ -1.05
TPM4-202ENST00000344824 H3BUT2 72 aa8.47□□□□□ -1.05
TPM4-202ENST00000344824 PRYO14603 147 aa8.47□□□□□ -1.05
TPM4-202ENST00000344824 C6orf99Q4VX62 202 aa8.47□□□□□ -1.05
TPM4-202ENST00000344824 KCNQ1DNQ9H478 68 aa8.47□□□□□ -1.05
TPM4-202ENST00000344824 TRIAP1O43715 76 aa8.46□□□□□ -1.05
TPM4-202ENST00000344824 ZNF73O43830 326 aaPredicted RBP8.46□□□□□ -1.05
TPM4-202ENST00000344824 REG3GQ6UW15 175 aa8.46□□□□□ -1.05
TPM4-202ENST00000344824 DIRC1Q969H9 104 aa8.46□□□□□ -1.05
TPM4-202ENST00000344824 CBY1Q9Y3M2 126 aa8.46□□□□□ -1.05
TPM4-202ENST00000344824 C9orf118A6NHY6 69 aa8.46□□□□□ -1.06
TPM4-202ENST00000344824 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.06
TPM4-202ENST00000344824 SPINK6Q6UWN8 80 aa8.46□□□□□ -1.06
TPM4-202ENST00000344824 ETDCA0A1B0GVM5 59 aa8.44□□□□□ -1.06
TPM4-202ENST00000344824 SCGB1C2P0DMR2 95 aa8.44□□□□□ -1.06
TPM4-202ENST00000344824 FAM19A1Q7Z5A9 133 aa8.43□□□□□ -1.06
TPM4-202ENST00000344824 COX7BP24311 80 aa8.42□□□□□ -1.06
TPM4-202ENST00000344824 IGLV7-43P04211 117 aa8.41□□□□□ -1.06
TPM4-202ENST00000344824 COX6CP09669 75 aa8.41□□□□□ -1.06
TPM4-202ENST00000344824 SPRR1AP35321 89 aa8.41□□□□□ -1.06
TPM4-202ENST00000344824 VAMP3Q15836 100 aa8.41□□□□□ -1.06
TPM4-202ENST00000344824 CLEC2BQ92478 149 aa8.41□□□□□ -1.06
TPM4-202ENST00000344824 BCE1O60756 84 aa8.4□□□□□ -1.06
TPM4-202ENST00000344824 MT1HL1P0DM35 61 aa8.4□□□□□ -1.06
TPM4-202ENST00000344824 UBE2AP49459 152 aa8.4□□□□□ -1.06
TPM4-202ENST00000344824 PRLHP81277 87 aa8.4□□□□□ -1.06
TPM4-202ENST00000344824 A0A1W2PPM0 123 aa8.39□□□□□ -1.07
TPM4-202ENST00000344824 B5MCH6 92 aa8.39□□□□□ -1.07
TPM4-202ENST00000344824 KRTAP4-16G5E9R7 235 aaPredicted RBP8.38□□□□□ -1.07
TPM4-202ENST00000344824 FABP2P12104 132 aa8.38□□□□□ -1.07
TPM4-202ENST00000344824 ELOF1P60002 83 aaKnown RBP8.38□□□□□ -1.07
TPM4-202ENST00000344824 XP32Q5T750 250 aa8.38□□□□□ -1.07
TPM4-202ENST00000344824 LINC01600Q96MT4 127 aa8.38□□□□□ -1.07
TPM4-202ENST00000344824 TNXBP22105 4242 aa8.38□□□□□ -1.07
TPM4-202ENST00000344824 LYRM7Q5U5X0 104 aa8.37□□□□□ -1.07
TPM4-202ENST00000344824 FAM218AQ96MZ4 157 aa8.37□□□□□ -1.07
TPM4-202ENST00000344824 HMCN2Q8NDA2 5059 aa8.37□□□□□ -1.07
TPM4-202ENST00000344824 TRBV7-6A0A0J9YX20 115 aa8.37□□□□□ -1.07
TPM4-202ENST00000344824 H0YGX0 51 aa8.37□□□□□ -1.07
TPM4-202ENST00000344824 Q6ZRX8 168 aa8.37□□□□□ -1.07
TPM4-202ENST00000344824 H0Y9J4 135 aa8.36□□□□□ -1.07
TPM4-202ENST00000344824 HIGD2AQ9BW72 106 aa8.36□□□□□ -1.07
TPM4-202ENST00000344824 TCL1BO95988 128 aa8.35□□□□□ -1.07
TPM4-202ENST00000344824 LINC00575Q6W349 94 aa8.35□□□□□ -1.07
TPM4-202ENST00000344824 Q9BRP9 147 aa8.35□□□□□ -1.07
TPM4-202ENST00000344824 SLC25A20O43772 301 aa8.34□□□□□ -1.07
TPM4-202ENST00000344824 SPCS1Q9Y6A9 102 aa8.34□□□□□ -1.07
TPM4-202ENST00000344824 A0A1B0GV90 55 aa8.33□□□□□ -1.08
TPM4-202ENST00000344824 hADV29S1A0JD25 119 aa8.32□□□□□ -1.08
TPM4-202ENST00000344824 ATXN8Q156A1 80 aa8.32□□□□□ -1.08
TPM4-202ENST00000344824 KRTAP13-1Q8IUC0 172 aa8.32□□□□□ -1.08
TPM4-202ENST00000344824 SMCR5Q8TEV8 140 aa8.32□□□□□ -1.08
TPM4-202ENST00000344824 DHRS4-AS1Q9P1J3 65 aa8.32□□□□□ -1.08
TPM4-202ENST00000344824 LST1O00453 97 aa8.31□□□□□ -1.08
TPM4-202ENST00000344824 ERC2-IT1O76042 136 aa8.31□□□□□ -1.08
TPM4-202ENST00000344824 TRBV20-1A0A075B6N2 111 aa8.3□□□□□ -1.08
TPM4-202ENST00000344824 ZNF861PO60384 105 aa8.3□□□□□ -1.08
TPM4-202ENST00000344824 SNCGO76070 127 aa8.3□□□□□ -1.08
TPM4-202ENST00000344824 DNAL4O96015 105 aa8.29□□□□□ -1.08
TPM4-202ENST00000344824 PRR26Q8N8Z3 221 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms