RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 ESRGQ1W209 222 aa13.79□□□□□ -0.2
E2F1-201ENST00000343380 EPM2AB3EWF7 344 aa13.79□□□□□ -0.2
E2F1-201ENST00000343380 DEFB105AQ8NG35 78 aa13.77□□□□□ -0.21
E2F1-201ENST00000343380 SERP1Q9Y6X1 66 aa13.76□□□□□ -0.21
E2F1-201ENST00000343380 C3orf84H3BNL1 204 aa13.75□□□□□ -0.21
E2F1-201ENST00000343380 BPY2O14599 106 aa13.75□□□□□ -0.21
E2F1-201ENST00000343380 SERTAD4-AS1Q5TG53 156 aa13.75□□□□□ -0.21
E2F1-201ENST00000343380 NREPQ16612 68 aa13.75□□□□□ -0.21
E2F1-201ENST00000343380 IGKV4-1P06312 121 aa13.74□□□□□ -0.21
E2F1-201ENST00000343380 IGKV2D-24A0A075B6R9 120 aa13.74□□□□□ -0.21
E2F1-201ENST00000343380 C1orf43Q9BWL3 253 aa13.73□□□□□ -0.21
E2F1-201ENST00000343380 Q8N377 158 aa13.72□□□□□ -0.21
E2F1-201ENST00000343380 OXLD1Q5BKU9 147 aa13.71□□□□□ -0.21
E2F1-201ENST00000343380 H3BNG1 76 aa13.71□□□□□ -0.21
E2F1-201ENST00000343380 C7orf33Q8WU49 177 aa13.71□□□□□ -0.21
E2F1-201ENST00000343380 SYCNQ0VAF6 134 aa13.7□□□□□ -0.22
E2F1-201ENST00000343380 KCNQ1DNQ9H478 68 aa13.7□□□□□ -0.22
E2F1-201ENST00000343380 WIPF1O43516 503 aa13.69□□□□□ -0.22
E2F1-201ENST00000343380 KRTAP10-11P60412 298 aa13.68□□□□□ -0.22
E2F1-201ENST00000343380 TMEM254Q8TBM7 123 aa13.68□□□□□ -0.22
E2F1-201ENST00000343380 NKAPP1Q8N9T2 125 aa13.67□□□□□ -0.22
E2F1-201ENST00000343380 RPL37AP8A6NKH3 93 aa13.66□□□□□ -0.22
E2F1-201ENST00000343380 FAM168BA1KXE4 195 aa13.65□□□□□ -0.22
E2F1-201ENST00000343380 LINC01556Q5JQF7 62 aa13.64□□□□□ -0.23
E2F1-201ENST00000343380 FP248Q71RG6 208 aaPredicted RBP13.64□□□□□ -0.23
E2F1-201ENST00000343380 OCR1Q9BZK8 76 aa13.64□□□□□ -0.23
E2F1-201ENST00000343380 Q9BRP9 147 aa13.63□□□□□ -0.23
E2F1-201ENST00000343380 IGLV5-48A0A075B6I7 105 aa13.62□□□□□ -0.23
E2F1-201ENST00000343380 NDUFC1O43677 76 aa13.61□□□□□ -0.23
E2F1-201ENST00000343380 ST20-AS1Q8NBB2 130 aa13.61□□□□□ -0.23
E2F1-201ENST00000343380 LINC00474Q9P2X8 69 aa13.61□□□□□ -0.23
E2F1-201ENST00000343380 A0A1W2PNM2 257 aa13.6□□□□□ -0.23
E2F1-201ENST00000343380 CASC10Q5T4H9 136 aa13.6□□□□□ -0.23
E2F1-201ENST00000343380 DEFB131BA0A096LNP1 70 aa13.59□□□□□ -0.23
E2F1-201ENST00000343380 KRTAP4-16G5E9R7 235 aaPredicted RBP13.58□□□□□ -0.23
E2F1-201ENST00000343380 Q6ZRX8 168 aa13.58□□□□□ -0.23
E2F1-201ENST00000343380 KRTAP7-1Q8IUC3 87 aa13.58□□□□□ -0.23
E2F1-201ENST00000343380 MAST4O15021 2626 aa13.58□□□□□ -0.24
E2F1-201ENST00000343380 ERC2-IT1O76042 136 aa13.57□□□□□ -0.24
E2F1-201ENST00000343380 F8P00451 2351 aa13.57□□□□□ -0.24
E2F1-201ENST00000343380 A0A0U1RQV1 116 aa13.57□□□□□ -0.24
E2F1-201ENST00000343380 STAB1Q9NY15 2570 aa13.55□□□□□ -0.24
E2F1-201ENST00000343380 SMIM26A0A096LP01 95 aa13.55□□□□□ -0.24
E2F1-201ENST00000343380 HIGD2AQ9BW72 106 aa13.55□□□□□ -0.24
E2F1-201ENST00000343380 F8WDY8 70 aa13.54□□□□□ -0.24
E2F1-201ENST00000343380 LINC00336Q6ZUF6 198 aa13.54□□□□□ -0.24
E2F1-201ENST00000343380 NOTCH1P46531 2555 aa13.54□□□□□ -0.24
E2F1-201ENST00000343380 IGLV1-50A0A075B6I6 118 aa13.54□□□□□ -0.24
E2F1-201ENST00000343380 TNP2Q05952 138 aa13.54□□□□□ -0.24
E2F1-201ENST00000343380 CMYA5Q8N3K9 4069 aa13.53□□□□□ -0.24
E2F1-201ENST00000343380 PRYO14603 147 aa13.53□□□□□ -0.24
E2F1-201ENST00000343380 SMIM29Q86T20 159 aa13.53□□□□□ -0.24
E2F1-201ENST00000343380 DHRS4-AS1Q9P1J3 65 aa13.53□□□□□ -0.24
E2F1-201ENST00000343380 C1orf137Q5JT78 98 aa13.52□□□□□ -0.24
E2F1-201ENST00000343380 DNAH10OSP0CZ25 163 aa13.52□□□□□ -0.25
E2F1-201ENST00000343380 FUSP35637 526 aaKnown RBP eCLIP13.52□□□□□ -0.25
E2F1-201ENST00000343380 FAM229BQ4G0N7 80 aa13.52□□□□□ -0.25
E2F1-201ENST00000343380 C11orf45Q8TAV5 145 aa13.52□□□□□ -0.25
E2F1-201ENST00000343380 DNAH1Q9P2D7 4330 aa13.52□□□□□ -0.25
E2F1-201ENST00000343380 TLX1NBP0CAT3 122 aa13.51□□□□□ -0.25
E2F1-201ENST00000343380 FAM30AQ9NZY2 134 aa13.51□□□□□ -0.25
E2F1-201ENST00000343380 ETDCA0A1B0GVM5 59 aa13.5□□□□□ -0.25
E2F1-201ENST00000343380 SPRR1AP35321 89 aa13.5□□□□□ -0.25
E2F1-201ENST00000343380 PLA2G2DQ9UNK4 145 aa13.49□□□□□ -0.25
E2F1-201ENST00000343380 FBN1P35555 2871 aaKnown RBP13.49□□□□□ -0.25
E2F1-201ENST00000343380 ATP5EP56381 51 aaPredicted RBP13.48□□□□□ -0.25
E2F1-201ENST00000343380 Q8NBF4 154 aa13.47□□□□□ -0.25
E2F1-201ENST00000343380 A0A0G2JQZ4 141 aa13.47□□□□□ -0.25
E2F1-201ENST00000343380 A0A1W2PNN7 141 aa13.47□□□□□ -0.25
E2F1-201ENST00000343380 MRAPQ8TCY5 172 aa13.46□□□□□ -0.26
E2F1-201ENST00000343380 IGLV5-37A0A075B6J1 123 aa13.45□□□□□ -0.26
E2F1-201ENST00000343380 DSCR10P59022 87 aa13.45□□□□□ -0.26
E2F1-201ENST00000343380 LINC00588Q9Y4M8 146 aa13.45□□□□□ -0.26
E2F1-201ENST00000343380 K7EQZ3 153 aa13.42□□□□□ -0.26
E2F1-201ENST00000343380 MRPL55Q7Z7F7 128 aaKnown RBP13.42□□□□□ -0.26
E2F1-201ENST00000343380 SPRR4Q96PI1 79 aa13.42□□□□□ -0.26
E2F1-201ENST00000343380 UBE2BP63146 152 aa13.41□□□□□ -0.26
E2F1-201ENST00000343380 A0A1B0GW54 56 aa13.39□□□□□ -0.27
E2F1-201ENST00000343380 MPLKIPQ8TAP9 179 aa13.39□□□□□ -0.27
E2F1-201ENST00000343380 DNAH3Q8TD57 4116 aa13.39□□□□□ -0.27
E2F1-201ENST00000343380 DNAH10Q8IVF4 4471 aa13.37□□□□□ -0.27
E2F1-201ENST00000343380 LCE6AA0A183 80 aa13.37□□□□□ -0.27
E2F1-201ENST00000343380 PRO0628Q9UI54 55 aa13.36□□□□□ -0.27
E2F1-201ENST00000343380 SRRM2Q9UQ35 2752 aaKnown RBP13.35□□□□□ -0.27
E2F1-201ENST00000343380 LINC00476Q8WZB0 136 aa13.35□□□□□ -0.27
E2F1-201ENST00000343380 NBEAL1Q6ZS30 2694 aa13.35□□□□□ -0.27
E2F1-201ENST00000343380 LYSTQ99698 3801 aa13.34□□□□□ -0.27
E2F1-201ENST00000343380 DEFB116Q30KQ4 102 aa13.34□□□□□ -0.27
E2F1-201ENST00000343380 COL6A5A8TX70 2615 aa13.33□□□□□ -0.28
E2F1-201ENST00000343380 REG3GQ6UW15 175 aa13.33□□□□□ -0.28
E2F1-201ENST00000343380 PRB2P02812 416 aaPredicted RBP13.32□□□□□ -0.28
E2F1-201ENST00000343380 IGFL1Q6UW32 110 aa13.3□□□□□ -0.28
E2F1-201ENST00000343380 ZCCHC13Q8WW36 166 aaKnown RBP13.3□□□□□ -0.28
E2F1-201ENST00000343380 PRLHP81277 87 aa13.29□□□□□ -0.28
E2F1-201ENST00000343380 KRTAP24-1Q3LI83 254 aa13.28□□□□□ -0.28
E2F1-201ENST00000343380 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.28□□□□□ -0.28
E2F1-201ENST00000343380 HUWE1Q7Z6Z7 4374 aaKnown RBP13.27□□□□□ -0.29
E2F1-201ENST00000343380 LRCOL1A6NCL2 159 aa13.27□□□□□ -0.29
E2F1-201ENST00000343380 PSCAO43653 123 aa13.27□□□□□ -0.29
E2F1-201ENST00000343380 CSMD3Q7Z407 3707 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms