RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 SPANXB1Q9NS25 103 aaPredicted RBP8.99□□□□□ -0.97
H3F3C-201ENST00000340398 FSIP2Q5CZC0 6907 aa8.99□□□□□ -0.97
H3F3C-201ENST00000340398 J3QQQ9 107 aa8.98□□□□□ -0.97
H3F3C-201ENST00000340398 SOSTDC1Q6X4U4 206 aa8.98□□□□□ -0.97
H3F3C-201ENST00000340398 LOC105371267A0A1B0GV96 52 aa8.97□□□□□ -0.97
H3F3C-201ENST00000340398 LEPROTL1O95214 131 aa8.97□□□□□ -0.97
H3F3C-201ENST00000340398 MIEN1Q9BRT3 115 aa8.97□□□□□ -0.97
H3F3C-201ENST00000340398 TRAV23DV6A0A075B6W5 121 aa8.96□□□□□ -0.98
H3F3C-201ENST00000340398 LINC00310P59036 64 aa8.96□□□□□ -0.98
H3F3C-201ENST00000340398 ADAMTSL4-AS1Q5T5F5 129 aa8.96□□□□□ -0.98
H3F3C-201ENST00000340398 CRCT1Q9UGL9 99 aa8.96□□□□□ -0.98
H3F3C-201ENST00000340398 NDUFC2O95298 119 aa8.95□□□□□ -0.98
H3F3C-201ENST00000340398 KRTAP19-2Q3LHN2 52 aa8.95□□□□□ -0.98
H3F3C-201ENST00000340398 HRCT1Q6UXD1 115 aa8.95□□□□□ -0.98
H3F3C-201ENST00000340398 ZNF73O43830 326 aaPredicted RBP8.94□□□□□ -0.98
H3F3C-201ENST00000340398 SERF1AO75920 110 aa8.94□□□□□ -0.98
H3F3C-201ENST00000340398 TRGC2P03986 189 aa8.94□□□□□ -0.98
H3F3C-201ENST00000340398 FABP4P15090 132 aa8.94□□□□□ -0.98
H3F3C-201ENST00000340398 LGALS3P17931 250 aaKnown RBP8.94□□□□□ -0.98
H3F3C-201ENST00000340398 JOSD1Q15040 202 aaPredicted RBP8.94□□□□□ -0.98
H3F3C-201ENST00000340398 DPM2O94777 84 aa8.93□□□□□ -0.98
H3F3C-201ENST00000340398 PLNP26678 52 aa8.93□□□□□ -0.98
H3F3C-201ENST00000340398 NMUP48645 174 aa8.92□□□□□ -0.98
H3F3C-201ENST00000340398 HERVK_113P61574 105 aa8.92□□□□□ -0.98
H3F3C-201ENST00000340398 PCOTHQ58A44 107 aa8.92□□□□□ -0.98
H3F3C-201ENST00000340398 A0A0J9YXY3 114 aa8.91□□□□□ -0.98
H3F3C-201ENST00000340398 C9orf92A6NGG3 77 aa8.91□□□□□ -0.98
H3F3C-201ENST00000340398 IGKCP01834 107 aa8.91□□□□□ -0.98
H3F3C-201ENST00000340398 IGLV8-61A0A075B6I0 122 aa8.89□□□□□ -0.99
H3F3C-201ENST00000340398 LORP23490 312 aaPredicted RBP8.89□□□□□ -0.99
H3F3C-201ENST00000340398 MT1HP80294 61 aa8.89□□□□□ -0.99
H3F3C-201ENST00000340398 HSPB8Q9UJY1 196 aa8.89□□□□□ -0.99
H3F3C-201ENST00000340398 HINT1P49773 126 aaPredicted RBP8.87□□□□□ -0.99
H3F3C-201ENST00000340398 OR13C6PQ8NH95 151 aa8.87□□□□□ -0.99
H3F3C-201ENST00000340398 C5orf52A6NGY3 159 aa8.86□□□□□ -0.99
H3F3C-201ENST00000340398 SPRR1BP22528 89 aa8.86□□□□□ -0.99
H3F3C-201ENST00000340398 COLCA2A8K830 154 aa8.85□□□□□ -0.99
H3F3C-201ENST00000340398 E9PLD3 99 aa8.84□□□□□ -0.99
H3F3C-201ENST00000340398 LINC00308Q8TCZ7 52 aa8.84□□□□□ -0.99
H3F3C-201ENST00000340398 LIMD2Q9BT23 127 aa8.84□□□□□ -0.99
H3F3C-201ENST00000340398 DEFB105AQ8NG35 78 aa8.83□□□□□ -1
H3F3C-201ENST00000340398 LITAFQ99732 161 aa8.83□□□□□ -1
H3F3C-201ENST00000340398 LAMTOR3Q9UHA4 124 aa8.83□□□□□ -1
H3F3C-201ENST00000340398 DHRS4-AS1Q9P1J3 65 aa8.82□□□□□ -1
H3F3C-201ENST00000340398 H7C2G1 150 aa8.81□□□□□ -1
H3F3C-201ENST00000340398 Q1RN00 199 aa8.81□□□□□ -1
H3F3C-201ENST00000340398 SLC25A34Q6PIV7 304 aa8.81□□□□□ -1
H3F3C-201ENST00000340398 SPANXCQ9NY87 97 aa8.81□□□□□ -1
H3F3C-201ENST00000340398 GHRHP01286 108 aa8.8□□□□□ -1
H3F3C-201ENST00000340398 TAL2Q16559 108 aa8.8□□□□□ -1
H3F3C-201ENST00000340398 CBY1Q9Y3M2 126 aa8.8□□□□□ -1
H3F3C-201ENST00000340398 COX7BP24311 80 aa8.79□□□□□ -1
H3F3C-201ENST00000340398 A0A0G2JQZ4 141 aa8.78□□□□□ -1
H3F3C-201ENST00000340398 S100A6P06703 90 aa8.77□□□□□ -1.01
H3F3C-201ENST00000340398 ELOF1P60002 83 aaKnown RBP8.77□□□□□ -1.01
H3F3C-201ENST00000340398 C6orf99Q4VX62 202 aa8.77□□□□□ -1.01
H3F3C-201ENST00000340398 SPANXDQ9BXN6 97 aa8.77□□□□□ -1.01
H3F3C-201ENST00000340398 TTTY13Q9BZ97 58 aa8.77□□□□□ -1.01
H3F3C-201ENST00000340398 CFC1BP0CG36 223 aa8.76□□□□□ -1.01
H3F3C-201ENST00000340398 KRTAP10-6P60371 365 aaPredicted RBP8.76□□□□□ -1.01
H3F3C-201ENST00000340398 PRO1933Q9H354 126 aa8.76□□□□□ -1.01
H3F3C-201ENST00000340398 SYS1-DBNDD2H3BUS1 97 aa8.75□□□□□ -1.01
H3F3C-201ENST00000340398 TIMM17BO60830 172 aa8.75□□□□□ -1.01
H3F3C-201ENST00000340398 CD164Q04900 197 aa8.75□□□□□ -1.01
H3F3C-201ENST00000340398 C1orf195Q5TG92 126 aa8.75□□□□□ -1.01
H3F3C-201ENST00000340398 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
H3F3C-201ENST00000340398 TEX49A0A1B0GTD5 131 aa8.74□□□□□ -1.01
H3F3C-201ENST00000340398 ZNF815PA8K554 130 aa8.73□□□□□ -1.01
H3F3C-201ENST00000340398 AKR1D1P51857 326 aa8.72□□□□□ -1.01
H3F3C-201ENST00000340398 LINC00518Q8N0U6 118 aa8.72□□□□□ -1.01
H3F3C-201ENST00000340398 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
H3F3C-201ENST00000340398 M0R2T5 61 aa8.7□□□□□ -1.02
H3F3C-201ENST00000340398 SMIM6P0DI80 62 aa8.7□□□□□ -1.02
H3F3C-201ENST00000340398 LINC01545Q5VT33 79 aa8.7□□□□□ -1.02
H3F3C-201ENST00000340398 Q5XG85 94 aa8.7□□□□□ -1.02
H3F3C-201ENST00000340398 RPL37P61927 97 aaKnown RBP8.68□□□□□ -1.02
H3F3C-201ENST00000340398 SNRPEP62304 92 aaKnown RBP8.67□□□□□ -1.02
H3F3C-201ENST00000340398 IGLV5-48A0A075B6I7 105 aa8.66□□□□□ -1.02
H3F3C-201ENST00000340398 TRBV7-6A0A0J9YX20 115 aa8.66□□□□□ -1.02
H3F3C-201ENST00000340398 PET117Q6UWS5 81 aa8.66□□□□□ -1.02
H3F3C-201ENST00000340398 A6NDN8 102 aa8.65□□□□□ -1.02
H3F3C-201ENST00000340398 HIST1H2BKO60814 126 aa8.65□□□□□ -1.02
H3F3C-201ENST00000340398 HIST1H2BJP06899 126 aa8.65□□□□□ -1.02
H3F3C-201ENST00000340398 HIST1H2BOP23527 126 aa8.65□□□□□ -1.02
H3F3C-201ENST00000340398 HIST1H2BBP33778 126 aa8.65□□□□□ -1.02
H3F3C-201ENST00000340398 HIST1H2BDP58876 126 aa8.65□□□□□ -1.02
H3F3C-201ENST00000340398 HIST1H2BCP62807 126 aa8.65□□□□□ -1.02
H3F3C-201ENST00000340398 HIST2H2BEQ16778 126 aa8.65□□□□□ -1.02
H3F3C-201ENST00000340398 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.65□□□□□ -1.02
H3F3C-201ENST00000340398 COX6B2Q6YFQ2 88 aa8.65□□□□□ -1.02
H3F3C-201ENST00000340398 HIST1H2BHQ93079 126 aa8.65□□□□□ -1.02
H3F3C-201ENST00000340398 HIST1H2BNQ99877 126 aa8.65□□□□□ -1.02
H3F3C-201ENST00000340398 HIST1H2BMQ99879 126 aa8.65□□□□□ -1.02
H3F3C-201ENST00000340398 A0A1B0GWB2 263 aa8.64□□□□□ -1.03
H3F3C-201ENST00000340398 C12orf57Q99622 126 aa8.64□□□□□ -1.03
H3F3C-201ENST00000340398 C3orf79P0CE67 100 aa8.63□□□□□ -1.03
H3F3C-201ENST00000340398 S100A2P29034 98 aa8.62□□□□□ -1.03
H3F3C-201ENST00000340398 COA6Q5JTJ3 125 aaKnown RBP8.62□□□□□ -1.03
H3F3C-201ENST00000340398 SCGB1D4Q6XE38 83 aa8.62□□□□□ -1.03
H3F3C-201ENST00000340398 TMEM238LA0A1B0GVL6 79 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms