RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 OCIAD2Q56VL3 154 aa13.42□□□□□ -0.26
VRK2-201ENST00000340157 TEN1Q86WV5 123 aa13.42□□□□□ -0.26
VRK2-201ENST00000340157 DNAH11Q96DT5 4516 aa13.42□□□□□ -0.26
VRK2-201ENST00000340157 ELOF1P60002 83 aaKnown RBP13.41□□□□□ -0.26
VRK2-201ENST00000340157 A0A1B0GX51 115 aa13.4□□□□□ -0.26
VRK2-201ENST00000340157 FAT2Q9NYQ8 4349 aa13.4□□□□□ -0.26
VRK2-201ENST00000340157 TRBV7-6A0A0J9YX20 115 aa13.4□□□□□ -0.26
VRK2-201ENST00000340157 PKIGQ9Y2B9 76 aa13.4□□□□□ -0.26
VRK2-201ENST00000340157 DNAL4O96015 105 aa13.39□□□□□ -0.27
VRK2-201ENST00000340157 COX7BP24311 80 aa13.39□□□□□ -0.27
VRK2-201ENST00000340157 CBY1Q9Y3M2 126 aa13.39□□□□□ -0.27
VRK2-201ENST00000340157 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.39□□□□□ -0.27
VRK2-201ENST00000340157 BAALC-AS2P0C853 105 aa13.38□□□□□ -0.27
VRK2-201ENST00000340157 KRTAP4-16G5E9R7 235 aaPredicted RBP13.37□□□□□ -0.27
VRK2-201ENST00000340157 SPRR1AP35321 89 aa13.37□□□□□ -0.27
VRK2-201ENST00000340157 LINC00528Q8N1L1 170 aa13.37□□□□□ -0.27
VRK2-201ENST00000340157 PRYO14603 147 aa13.36□□□□□ -0.27
VRK2-201ENST00000340157 SPACA4Q8TDM5 124 aa13.36□□□□□ -0.27
VRK2-201ENST00000340157 hADV29S1A0JD25 119 aa13.36□□□□□ -0.27
VRK2-201ENST00000340157 LINC00474Q9P2X8 69 aa13.36□□□□□ -0.27
VRK2-201ENST00000340157 DNAH5Q8TE73 4624 aa13.35□□□□□ -0.27
VRK2-201ENST00000340157 IGLV5-52A0A0A0MRZ9 124 aa13.35□□□□□ -0.27
VRK2-201ENST00000340157 PHF5AQ7RTV0 110 aaKnown RBP13.33□□□□□ -0.27
VRK2-201ENST00000340157 PKD1P98161 4303 aa13.33□□□□□ -0.28
VRK2-201ENST00000340157 TEX49A0A1B0GTD5 131 aa13.33□□□□□ -0.28
VRK2-201ENST00000340157 KRTAP11-1Q8IUC1 163 aa13.33□□□□□ -0.28
VRK2-201ENST00000340157 LCE6AA0A183 80 aa13.32□□□□□ -0.28
VRK2-201ENST00000340157 KRTAP10-2P60368 255 aa13.32□□□□□ -0.28
VRK2-201ENST00000340157 PPDPFLQ8WWR9 84 aa13.31□□□□□ -0.28
VRK2-201ENST00000340157 ORMDL1Q9P0S3 153 aa13.31□□□□□ -0.28
VRK2-201ENST00000340157 EPM2AB3EWF7 344 aa13.31□□□□□ -0.28
VRK2-201ENST00000340157 B5MCH6 92 aa13.29□□□□□ -0.28
VRK2-201ENST00000340157 Q6ZQY7 126 aa13.29□□□□□ -0.28
VRK2-201ENST00000340157 K7ERU9 68 aa13.28□□□□□ -0.28
VRK2-201ENST00000340157 REG3GQ6UW15 175 aa13.28□□□□□ -0.28
VRK2-201ENST00000340157 Q6ZRX8 168 aa13.28□□□□□ -0.28
VRK2-201ENST00000340157 SNCGO76070 127 aa13.27□□□□□ -0.28
VRK2-201ENST00000340157 Q9BRP9 147 aa13.27□□□□□ -0.29
VRK2-201ENST00000340157 DNAH8Q96JB1 4490 aa13.26□□□□□ -0.29
VRK2-201ENST00000340157 ETDCA0A1B0GVM5 59 aa13.25□□□□□ -0.29
VRK2-201ENST00000340157 DPH3Q96FX2 82 aa13.25□□□□□ -0.29
VRK2-201ENST00000340157 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.23□□□□□ -0.29
VRK2-201ENST00000340157 UBE2BP63146 152 aa13.23□□□□□ -0.29
VRK2-201ENST00000340157 KMT2CQ8NEZ4 4911 aaKnown RBP13.22□□□□□ -0.29
VRK2-201ENST00000340157 RYR2Q92736 4967 aa13.22□□□□□ -0.29
VRK2-201ENST00000340157 TMEM256-PLSCR3K7ERE1 68 aa13.21□□□□□ -0.29
VRK2-201ENST00000340157 INAFM2P0DMQ5 153 aa13.21□□□□□ -0.29
VRK2-201ENST00000340157 OBSCN-AS1Q96MR7 158 aa13.21□□□□□ -0.29
VRK2-201ENST00000340157 PLAC8Q9NZF1 115 aa13.21□□□□□ -0.3
VRK2-201ENST00000340157 DHRS4-AS1Q9P1J3 65 aa13.19□□□□□ -0.3
VRK2-201ENST00000340157 J3QR89 54 aa13.18□□□□□ -0.3
VRK2-201ENST00000340157 ERC2-IT1O76042 136 aa13.18□□□□□ -0.3
VRK2-201ENST00000340157 SMCR5Q8TEV8 140 aa13.17□□□□□ -0.3
VRK2-201ENST00000340157 PRLHP81277 87 aa13.16□□□□□ -0.3
VRK2-201ENST00000340157 FAM19A1Q7Z5A9 133 aa13.16□□□□□ -0.3
VRK2-201ENST00000340157 FAM30AQ9NZY2 134 aa13.16□□□□□ -0.3
VRK2-201ENST00000340157 A0A1B0GV72 72 aa13.16□□□□□ -0.3
VRK2-201ENST00000340157 LINC01547P58512 204 aaPredicted RBP13.14□□□□□ -0.31
VRK2-201ENST00000340157 KRTAP10-1P60331 282 aa13.14□□□□□ -0.31
VRK2-201ENST00000340157 C14orf132Q9NPU4 83 aa13.13□□□□□ -0.31
VRK2-201ENST00000340157 ST20-AS1Q8NBB2 130 aa13.12□□□□□ -0.31
VRK2-201ENST00000340157 H3BQ85 93 aa13.11□□□□□ -0.31
VRK2-201ENST00000340157 PKHD1P08F94 4074 aa13.11□□□□□ -0.31
VRK2-201ENST00000340157 Q6ZSA8 131 aa13.1□□□□□ -0.31
VRK2-201ENST00000340157 Q8N377 158 aa13.1□□□□□ -0.31
VRK2-201ENST00000340157 BCE1O60756 84 aa13.09□□□□□ -0.31
VRK2-201ENST00000340157 SRRM2Q9UQ35 2752 aaKnown RBP13.09□□□□□ -0.31
VRK2-201ENST00000340157 H0Y9J4 135 aa13.08□□□□□ -0.32
VRK2-201ENST00000340157 KRTAP13-1Q8IUC0 172 aa13.08□□□□□ -0.32
VRK2-201ENST00000340157 DEFB105AQ8NG35 78 aa13.08□□□□□ -0.32
VRK2-201ENST00000340157 JMJD7-PLA2G4BH0Y9G9 81 aa13.08□□□□□ -0.32
VRK2-201ENST00000340157 LAMTOR3Q9UHA4 124 aa13.08□□□□□ -0.32
VRK2-201ENST00000340157 IGLV5-48A0A075B6I7 105 aa13.07□□□□□ -0.32
VRK2-201ENST00000340157 LINC00336Q6ZUF6 198 aa13.07□□□□□ -0.32
VRK2-201ENST00000340157 CIRBP-AS1Q8TBR5 109 aa13.07□□□□□ -0.32
VRK2-201ENST00000340157 HIGD2AQ9BW72 106 aa13.06□□□□□ -0.32
VRK2-201ENST00000340157 GHRHP01286 108 aa13.06□□□□□ -0.32
VRK2-201ENST00000340157 PSORS1C2Q9UIG4 136 aa13.06□□□□□ -0.32
VRK2-201ENST00000340157 NDUFV3P56181 108 aaKnown RBP13.05□□□□□ -0.32
VRK2-201ENST00000340157 CDIP1Q9H305 208 aa13.05□□□□□ -0.32
VRK2-201ENST00000340157 VPS25Q9BRG1 176 aa13.04□□□□□ -0.32
VRK2-201ENST00000340157 UBE2AP49459 152 aa13.04□□□□□ -0.32
VRK2-201ENST00000340157 SCXQ7RTU7 201 aa13.04□□□□□ -0.32
VRK2-201ENST00000340157 A0A1B0GVY2 172 aa13.02□□□□□ -0.32
VRK2-201ENST00000340157 HAMPP81172 84 aa13.02□□□□□ -0.32
VRK2-201ENST00000340157 RBM3P98179 157 aaKnown RBP13.02□□□□□ -0.32
VRK2-201ENST00000340157 C3orf22Q8N5N4 141 aa13.02□□□□□ -0.32
VRK2-201ENST00000340157 FAM240AA0A1B0GVK7 77 aa13.02□□□□□ -0.33
VRK2-201ENST00000340157 GAGE2AQ6NT46 116 aa13□□□□□ -0.33
VRK2-201ENST00000340157 LRP1BQ9NZR2 4599 aa12.99□□□□□ -0.33
VRK2-201ENST00000340157 LOC110117498A0A087WWA1 95 aa12.97□□□□□ -0.33
VRK2-201ENST00000340157 Q6ZQT0 140 aa12.97□□□□□ -0.33
VRK2-201ENST00000340157 TRBV7-4A0A0J9YYF1 115 aa12.97□□□□□ -0.33
VRK2-201ENST00000340157 CCKP06307 115 aa12.97□□□□□ -0.33
VRK2-201ENST00000340157 C1orf137Q5JT78 98 aa12.97□□□□□ -0.33
VRK2-201ENST00000340157 SMIM29Q86T20 159 aa12.97□□□□□ -0.33
VRK2-201ENST00000340157 DYNC1H1Q14204 4646 aaKnown RBP12.95□□□□□ -0.34
VRK2-201ENST00000340157 DSCR8Q96T75 97 aa12.94□□□□□ -0.34
VRK2-201ENST00000340157 RYR3Q15413 4870 aa12.93□□□□□ -0.34
VRK2-201ENST00000340157 ACYP1P07311 99 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms