RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 hDV103S1A0JD37 113 aa10.86□□□□□ -0.67
NPHP3-201ENST00000337331 FSHBP01225 129 aa10.86□□□□□ -0.67
NPHP3-201ENST00000337331 CHD6Q8TD26 2715 aa10.86□□□□□ -0.67
NPHP3-201ENST00000337331 LINC01556Q5JQF7 62 aa10.85□□□□□ -0.67
NPHP3-201ENST00000337331 IGHV6-1A0A0B4J1U7 121 aa10.84□□□□□ -0.67
NPHP3-201ENST00000337331 HELZ2Q9BYK8 2649 aaKnown RBP10.84□□□□□ -0.67
NPHP3-201ENST00000337331 CIRBP-AS1Q8TBR5 109 aa10.84□□□□□ -0.67
NPHP3-201ENST00000337331 PCOTHQ58A44 107 aa10.84□□□□□ -0.67
NPHP3-201ENST00000337331 NUPR2A6NF83 97 aa10.83□□□□□ -0.68
NPHP3-201ENST00000337331 RBM12B-AS1Q9P1G2 102 aa10.83□□□□□ -0.68
NPHP3-201ENST00000337331 H0Y9P7 68 aa10.82□□□□□ -0.68
NPHP3-201ENST00000337331 LINC00167Q96N53 147 aa10.82□□□□□ -0.68
NPHP3-201ENST00000337331 CFAP47Q6ZTR5 3102 aa10.82□□□□□ -0.68
NPHP3-201ENST00000337331 A0A096LNT2 108 aa10.8□□□□□ -0.68
NPHP3-201ENST00000337331 EPM2AB3EWF7 344 aa10.8□□□□□ -0.68
NPHP3-201ENST00000337331 CR1P17927 2039 aa10.8□□□□□ -0.68
NPHP3-201ENST00000337331 SPAG11AQ6PDA7 123 aa10.79□□□□□ -0.68
NPHP3-201ENST00000337331 Q6ZRP5 223 aa10.77□□□□□ -0.68
NPHP3-201ENST00000337331 ELOF1P60002 83 aaKnown RBP10.77□□□□□ -0.69
NPHP3-201ENST00000337331 Q8NAQ8 132 aa10.77□□□□□ -0.69
NPHP3-201ENST00000337331 OCR1Q9BZK8 76 aa10.77□□□□□ -0.69
NPHP3-201ENST00000337331 Q1T7F1 81 aa10.76□□□□□ -0.69
NPHP3-201ENST00000337331 IGLV5-52A0A0A0MRZ9 124 aa10.75□□□□□ -0.69
NPHP3-201ENST00000337331 ADGRG4Q8IZF6 3080 aa10.75□□□□□ -0.69
NPHP3-201ENST00000337331 ATP11AUNQ6ZP68 121 aa10.74□□□□□ -0.69
NPHP3-201ENST00000337331 SERTAD4-AS1Q5TG53 156 aa10.73□□□□□ -0.69
NPHP3-201ENST00000337331 H3BNG1 76 aa10.73□□□□□ -0.69
NPHP3-201ENST00000337331 DMXL1Q9Y485 3027 aa10.72□□□□□ -0.69
NPHP3-201ENST00000337331 BOD1L1Q8NFC6 3051 aa10.72□□□□□ -0.69
NPHP3-201ENST00000337331 IGLV6-57P01721 117 aa10.72□□□□□ -0.69
NPHP3-201ENST00000337331 K7EQZ3 153 aa10.71□□□□□ -0.69
NPHP3-201ENST00000337331 CSNK1G2-AS1Q8NCQ2 148 aa10.71□□□□□ -0.69
NPHP3-201ENST00000337331 K7ERS5 55 aa10.71□□□□□ -0.7
NPHP3-201ENST00000337331 Q8NBF4 154 aa10.7□□□□□ -0.7
NPHP3-201ENST00000337331 WDFY3Q8IZQ1 3526 aa10.7□□□□□ -0.7
NPHP3-201ENST00000337331 Q6ZRX8 168 aa10.69□□□□□ -0.7
NPHP3-201ENST00000337331 ST20-AS1Q8NBB2 130 aa10.69□□□□□ -0.7
NPHP3-201ENST00000337331 RETNLBQ9BQ08 111 aa10.69□□□□□ -0.7
NPHP3-201ENST00000337331 DCHS1Q96JQ0 3298 aa10.69□□□□□ -0.7
NPHP3-201ENST00000337331 TEP1Q99973 2627 aaKnown RBP10.68□□□□□ -0.7
NPHP3-201ENST00000337331 MDFIQ99750 246 aa10.68□□□□□ -0.7
NPHP3-201ENST00000337331 MUC3AQ02505 3323 aa10.68□□□□□ -0.7
NPHP3-201ENST00000337331 CYP4F30PQ9H0H9 118 aa10.67□□□□□ -0.7
NPHP3-201ENST00000337331 DMXL2Q8TDJ6 3036 aa10.67□□□□□ -0.7
NPHP3-201ENST00000337331 VPREB1P12018 145 aa10.67□□□□□ -0.7
NPHP3-201ENST00000337331 C7orf65Q6ZTY9 151 aa10.67□□□□□ -0.7
NPHP3-201ENST00000337331 GIG44P09565 113 aaPredicted RBP10.67□□□□□ -0.7
NPHP3-201ENST00000337331 LINC00476Q8WZB0 136 aa10.66□□□□□ -0.7
NPHP3-201ENST00000337331 GVQW2A0A096LPI5 108 aaPredicted RBP10.65□□□□□ -0.7
NPHP3-201ENST00000337331 C1orf134Q5TEV5 83 aa10.65□□□□□ -0.7
NPHP3-201ENST00000337331 KRTAP24-1Q3LI83 254 aa10.65□□□□□ -0.7
NPHP3-201ENST00000337331 ZZEF1O43149 2961 aa10.63□□□□□ -0.71
NPHP3-201ENST00000337331 LINC00588Q9Y4M8 146 aa10.63□□□□□ -0.71
NPHP3-201ENST00000337331 LCA10Q71F78 164 aa10.63□□□□□ -0.71
NPHP3-201ENST00000337331 TEX15Q9BXT5 2789 aa10.63□□□□□ -0.71
NPHP3-201ENST00000337331 A0A1B0GW54 56 aa10.63□□□□□ -0.71
NPHP3-201ENST00000337331 C19orf73Q9NVV2 129 aa10.63□□□□□ -0.71
NPHP3-201ENST00000337331 LOC101927531A0A1B0GV80 90 aa10.62□□□□□ -0.71
NPHP3-201ENST00000337331 PHF5AQ7RTV0 110 aaKnown RBP10.62□□□□□ -0.71
NPHP3-201ENST00000337331 RPL37AP61513 92 aaKnown RBP10.61□□□□□ -0.71
NPHP3-201ENST00000337331 COA5Q86WW8 74 aa10.61□□□□□ -0.71
NPHP3-201ENST00000337331 STAB1Q9NY15 2570 aa10.61□□□□□ -0.71
NPHP3-201ENST00000337331 MOBPQ13875 183 aa10.6□□□□□ -0.71
NPHP3-201ENST00000337331 NOTCH1P46531 2555 aa10.6□□□□□ -0.71
NPHP3-201ENST00000337331 SPINK1P00995 79 aa10.59□□□□□ -0.71
NPHP3-201ENST00000337331 C16orf90A8MZG2 172 aa10.59□□□□□ -0.71
NPHP3-201ENST00000337331 H3BS24 57 aa10.59□□□□□ -0.71
NPHP3-201ENST00000337331 IGSF10Q6WRI0 2623 aa10.59□□□□□ -0.71
NPHP3-201ENST00000337331 CHTF8P0CG12 524 aa10.58□□□□□ -0.72
NPHP3-201ENST00000337331 LINC00528Q8N1L1 170 aa10.57□□□□□ -0.72
NPHP3-201ENST00000337331 FAM168BA1KXE4 195 aa10.57□□□□□ -0.72
NPHP3-201ENST00000337331 GCN1Q92616 2671 aaKnown RBP10.57□□□□□ -0.72
NPHP3-201ENST00000337331 Q5VV11 94 aa10.56□□□□□ -0.72
NPHP3-201ENST00000337331 PRR34Q9NV39 138 aa10.56□□□□□ -0.72
NPHP3-201ENST00000337331 DNAH10OSP0CZ25 163 aa10.55□□□□□ -0.72
NPHP3-201ENST00000337331 Q8NDZ9 215 aa10.55□□□□□ -0.72
NPHP3-201ENST00000337331 ITPR1Q14643 2758 aa10.55□□□□□ -0.72
NPHP3-201ENST00000337331 UNC79Q9P2D8 2635 aa10.54□□□□□ -0.72
NPHP3-201ENST00000337331 SETXQ7Z333 2677 aaKnown RBP10.54□□□□□ -0.72
NPHP3-201ENST00000337331 A0A0G2JQZ4 141 aa10.53□□□□□ -0.72
NPHP3-201ENST00000337331 A0A1W2PNN7 141 aa10.53□□□□□ -0.72
NPHP3-201ENST00000337331 Q8N377 158 aa10.53□□□□□ -0.72
NPHP3-201ENST00000337331 IGKV2D-30A0A075B6S6 120 aa10.52□□□□□ -0.72
NPHP3-201ENST00000337331 IGKV2-30P06310 120 aa10.52□□□□□ -0.72
NPHP3-201ENST00000337331 NBEAL1Q6ZS30 2694 aa10.52□□□□□ -0.73
NPHP3-201ENST00000337331 A8MU10 97 aa10.51□□□□□ -0.73
NPHP3-201ENST00000337331 Q8N9P0 234 aaPredicted RBP10.51□□□□□ -0.73
NPHP3-201ENST00000337331 CDC42SE1Q9NRR8 79 aa10.51□□□□□ -0.73
NPHP3-201ENST00000337331 KCNQ1DNQ9H478 68 aa10.51□□□□□ -0.73
NPHP3-201ENST00000337331 TP53AIP1Q9HCN2 124 aa10.51□□□□□ -0.73
NPHP3-201ENST00000337331 A0A1W2PNM2 257 aa10.5□□□□□ -0.73
NPHP3-201ENST00000337331 LINC00612Q8N6U2 182 aa10.5□□□□□ -0.73
NPHP3-201ENST00000337331 C8orf87E5RJ46 101 aa10.49□□□□□ -0.73
NPHP3-201ENST00000337331 NBDYA0A0U1RRE5 68 aa10.49□□□□□ -0.73
NPHP3-201ENST00000337331 H3BPC8 53 aa10.48□□□□□ -0.73
NPHP3-201ENST00000337331 COL6A5A8TX70 2615 aa10.48□□□□□ -0.73
NPHP3-201ENST00000337331 SPACA4Q8TDM5 124 aa10.48□□□□□ -0.73
NPHP3-201ENST00000337331 C15orf56Q8N910 161 aa10.48□□□□□ -0.73
NPHP3-201ENST00000337331 LOC400499M0QZD8 3231 aa10.48□□□□□ -0.73
NPHP3-201ENST00000337331 LRBAP50851 2863 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms