RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 SRRM2Q9UQ35 2752 aaKnown RBP8.61□□□□□ -1.03
APOBEC3B-202ENST00000335760 TRAV13-2A0A0B4J235 113 aa8.61□□□□□ -1.03
APOBEC3B-202ENST00000335760 SPRR1AP35321 89 aa8.6□□□□□ -1.03
APOBEC3B-202ENST00000335760 UBE2AP49459 152 aa8.6□□□□□ -1.03
APOBEC3B-202ENST00000335760 HSD52Q0P140 79 aa8.6□□□□□ -1.03
APOBEC3B-202ENST00000335760 CBY1Q9Y3M2 126 aa8.6□□□□□ -1.03
APOBEC3B-202ENST00000335760 ETDCA0A1B0GVM5 59 aa8.59□□□□□ -1.03
APOBEC3B-202ENST00000335760 ZNF861PO60384 105 aa8.59□□□□□ -1.03
APOBEC3B-202ENST00000335760 RPL28P46779 137 aaKnown RBP8.59□□□□□ -1.03
APOBEC3B-202ENST00000335760 SPINK6Q6UWN8 80 aa8.59□□□□□ -1.03
APOBEC3B-202ENST00000335760 PRLHP81277 87 aa8.58□□□□□ -1.04
APOBEC3B-202ENST00000335760 KRTAP4-16G5E9R7 235 aaPredicted RBP8.57□□□□□ -1.04
APOBEC3B-202ENST00000335760 TSTD3H0UI37 97 aa8.57□□□□□ -1.04
APOBEC3B-202ENST00000335760 ZNF73O43830 326 aaPredicted RBP8.57□□□□□ -1.04
APOBEC3B-202ENST00000335760 FXYD2P54710 66 aa8.57□□□□□ -1.04
APOBEC3B-202ENST00000335760 KRTAP13-1Q8IUC0 172 aa8.57□□□□□ -1.04
APOBEC3B-202ENST00000335760 TMEM238LA0A1B0GVL6 79 aa8.56□□□□□ -1.04
APOBEC3B-202ENST00000335760 A6NJY4 79 aa8.56□□□□□ -1.04
APOBEC3B-202ENST00000335760 CFC1BP0CG36 223 aa8.56□□□□□ -1.04
APOBEC3B-202ENST00000335760 CFC1P0CG37 223 aa8.56□□□□□ -1.04
APOBEC3B-202ENST00000335760 DIRC1Q969H9 104 aa8.56□□□□□ -1.04
APOBEC3B-202ENST00000335760 B5MCH6 92 aa8.55□□□□□ -1.04
APOBEC3B-202ENST00000335760 RPL13AP40429 203 aaKnown RBP8.55□□□□□ -1.04
APOBEC3B-202ENST00000335760 RAB37Q96AX2 223 aa8.55□□□□□ -1.04
APOBEC3B-202ENST00000335760 H0Y9J4 135 aa8.54□□□□□ -1.04
APOBEC3B-202ENST00000335760 A0A0B4J2C4 111 aa8.53□□□□□ -1.04
APOBEC3B-202ENST00000335760 HINT1P49773 126 aaPredicted RBP8.53□□□□□ -1.04
APOBEC3B-202ENST00000335760 CTAG1AP78358 180 aa8.53□□□□□ -1.04
APOBEC3B-202ENST00000335760 C6orf99Q4VX62 202 aa8.53□□□□□ -1.04
APOBEC3B-202ENST00000335760 SMIM11BQ8TCY0 68 aa8.53□□□□□ -1.04
APOBEC3B-202ENST00000335760 PCLOQ9Y6V0 5065 aa8.52□□□□□ -1.04
APOBEC3B-202ENST00000335760 HIGD2AQ9BW72 106 aa8.52□□□□□ -1.05
APOBEC3B-202ENST00000335760 BVES-AS1Q5T3Y7 98 aa8.51□□□□□ -1.05
APOBEC3B-202ENST00000335760 Q6ZRX8 168 aa8.51□□□□□ -1.05
APOBEC3B-202ENST00000335760 NHP2Q9NX24 153 aaKnown RBP8.51□□□□□ -1.05
APOBEC3B-202ENST00000335760 FAT3Q8TDW7 4589 aa8.5□□□□□ -1.05
APOBEC3B-202ENST00000335760 H7C2G1 150 aa8.5□□□□□ -1.05
APOBEC3B-202ENST00000335760 COX7BP24311 80 aa8.5□□□□□ -1.05
APOBEC3B-202ENST00000335760 SMCR5Q8TEV8 140 aa8.49□□□□□ -1.05
APOBEC3B-202ENST00000335760 PRO1854Q9UHT4 67 aa8.49□□□□□ -1.05
APOBEC3B-202ENST00000335760 Q9BRP9 147 aa8.48□□□□□ -1.05
APOBEC3B-202ENST00000335760 LRP1Q07954 4544 aaKnown RBP8.48□□□□□ -1.05
APOBEC3B-202ENST00000335760 TRBV7-6A0A0J9YX20 115 aa8.48□□□□□ -1.05
APOBEC3B-202ENST00000335760 A0A1B0GWB2 263 aa8.48□□□□□ -1.05
APOBEC3B-202ENST00000335760 K7ERJ3 54 aa8.48□□□□□ -1.05
APOBEC3B-202ENST00000335760 M0R143 59 aa8.48□□□□□ -1.05
APOBEC3B-202ENST00000335760 ELOF1P60002 83 aaKnown RBP8.48□□□□□ -1.05
APOBEC3B-202ENST00000335760 MYCBP2O75592 4640 aa8.47□□□□□ -1.05
APOBEC3B-202ENST00000335760 SMCPP49901 116 aaPredicted RBP8.47□□□□□ -1.05
APOBEC3B-202ENST00000335760 Q1RN00 199 aa8.47□□□□□ -1.05
APOBEC3B-202ENST00000335760 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3B-202ENST00000335760 ERC2-IT1O76042 136 aa8.46□□□□□ -1.06
APOBEC3B-202ENST00000335760 VAMP3Q15836 100 aa8.46□□□□□ -1.06
APOBEC3B-202ENST00000335760 J3QL48 77 aa8.45□□□□□ -1.06
APOBEC3B-202ENST00000335760 DHRS4-AS1Q9P1J3 65 aa8.45□□□□□ -1.06
APOBEC3B-202ENST00000335760 KRTAP1-4P0C5Y4 121 aa8.44□□□□□ -1.06
APOBEC3B-202ENST00000335760 OXTP01178 125 aa8.43□□□□□ -1.06
APOBEC3B-202ENST00000335760 LINC01600Q96MT4 127 aa8.43□□□□□ -1.06
APOBEC3B-202ENST00000335760 ZNF706Q9Y5V0 76 aaPredicted RBP8.43□□□□□ -1.06
APOBEC3B-202ENST00000335760 KRTAP29-1A8MX34 341 aaPredicted RBP8.42□□□□□ -1.06
APOBEC3B-202ENST00000335760 SPRR4Q96PI1 79 aa8.42□□□□□ -1.06
APOBEC3B-202ENST00000335760 BATFQ16520 125 aa8.41□□□□□ -1.06
APOBEC3B-202ENST00000335760 ANAPC11Q9NYG5 84 aa8.41□□□□□ -1.06
APOBEC3B-202ENST00000335760 TSPAN13O95857 204 aa8.4□□□□□ -1.06
APOBEC3B-202ENST00000335760 ST20-AS1Q8NBB2 130 aa8.4□□□□□ -1.06
APOBEC3B-202ENST00000335760 SLC25A20O43772 301 aa8.39□□□□□ -1.07
APOBEC3B-202ENST00000335760 PSMB2P49721 201 aa8.39□□□□□ -1.07
APOBEC3B-202ENST00000335760 LINC00575Q6W349 94 aa8.39□□□□□ -1.07
APOBEC3B-202ENST00000335760 TRIAP1O43715 76 aa8.38□□□□□ -1.07
APOBEC3B-202ENST00000335760 GAGE2AQ6NT46 116 aa8.38□□□□□ -1.07
APOBEC3B-202ENST00000335760 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
APOBEC3B-202ENST00000335760 H0YGX0 51 aa8.37□□□□□ -1.07
APOBEC3B-202ENST00000335760 FAM229BQ4G0N7 80 aa8.37□□□□□ -1.07
APOBEC3B-202ENST00000335760 hADV29S1A0JD25 119 aa8.36□□□□□ -1.07
APOBEC3B-202ENST00000335760 CRYGAP11844 174 aa8.36□□□□□ -1.07
APOBEC3B-202ENST00000335760 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
APOBEC3B-202ENST00000335760 A0A087X002 238 aa8.35□□□□□ -1.07
APOBEC3B-202ENST00000335760 MT1HL1P0DM35 61 aa8.35□□□□□ -1.07
APOBEC3B-202ENST00000335760 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
APOBEC3B-202ENST00000335760 DEFB105AQ8NG35 78 aa8.35□□□□□ -1.07
APOBEC3B-202ENST00000335760 PCP4L1A6NKN8 68 aa8.35□□□□□ -1.07
APOBEC3B-202ENST00000335760 COX6CP09669 75 aa8.35□□□□□ -1.07
APOBEC3B-202ENST00000335760 KRTAP10-8P60410 259 aa8.35□□□□□ -1.07
APOBEC3B-202ENST00000335760 TNXBP22105 4242 aa8.34□□□□□ -1.07
APOBEC3B-202ENST00000335760 FAM218AQ96MZ4 157 aa8.34□□□□□ -1.07
APOBEC3B-202ENST00000335760 SNCGO76070 127 aa8.33□□□□□ -1.08
APOBEC3B-202ENST00000335760 KRTAP13-2Q52LG2 175 aa8.33□□□□□ -1.08
APOBEC3B-202ENST00000335760 SCGB1C2P0DMR2 95 aa8.32□□□□□ -1.08
APOBEC3B-202ENST00000335760 SPRR1BP22528 89 aa8.32□□□□□ -1.08
APOBEC3B-202ENST00000335760 Q6ZQY7 126 aa8.32□□□□□ -1.08
APOBEC3B-202ENST00000335760 CLEC2BQ92478 149 aa8.32□□□□□ -1.08
APOBEC3B-202ENST00000335760 NAA38Q9BRA0 125 aaKnown RBP8.32□□□□□ -1.08
APOBEC3B-202ENST00000335760 SNHG12Q9BXW3 62 aa8.32□□□□□ -1.08
APOBEC3B-202ENST00000335760 TEX49A0A1B0GTD5 131 aa8.31□□□□□ -1.08
APOBEC3B-202ENST00000335760 LINC01547P58512 204 aaPredicted RBP8.31□□□□□ -1.08
APOBEC3B-202ENST00000335760 C3orf22Q8N5N4 141 aa8.31□□□□□ -1.08
APOBEC3B-202ENST00000335760 TYMSOSQ8TAI1 123 aa8.31□□□□□ -1.08
APOBEC3B-202ENST00000335760 IGLV5-48A0A075B6I7 105 aa8.3□□□□□ -1.08
APOBEC3B-202ENST00000335760 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.3□□□□□ -1.08
APOBEC3B-202ENST00000335760 IGLV9-49A0A0B4J1Y8 123 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms