RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TM2D3Q9BRN9 247 aa11.55□□□□□ -0.56
LRCH3-201ENST00000334859 LINC01547P58512 204 aaPredicted RBP11.53□□□□□ -0.56
LRCH3-201ENST00000334859 KCNQ1DNQ9H478 68 aa11.53□□□□□ -0.56
LRCH3-201ENST00000334859 K7EIL1 84 aa11.52□□□□□ -0.56
LRCH3-201ENST00000334859 CRYGAP11844 174 aa11.52□□□□□ -0.56
LRCH3-201ENST00000334859 MGAM2Q2M2H8 2515 aa11.52□□□□□ -0.57
LRCH3-201ENST00000334859 TLX1NBP0CAT3 122 aa11.51□□□□□ -0.57
LRCH3-201ENST00000334859 RMI2Q96E14 147 aa11.51□□□□□ -0.57
LRCH3-201ENST00000334859 FAM168BA1KXE4 195 aa11.51□□□□□ -0.57
LRCH3-201ENST00000334859 RPL37AP8A6NKH3 93 aa11.5□□□□□ -0.57
LRCH3-201ENST00000334859 SMIM20Q8N5G0 67 aa11.5□□□□□ -0.57
LRCH3-201ENST00000334859 DEFB105AQ8NG35 78 aa11.49□□□□□ -0.57
LRCH3-201ENST00000334859 HUWE1Q7Z6Z7 4374 aaKnown RBP11.48□□□□□ -0.57
LRCH3-201ENST00000334859 CYSTM1Q9H1C7 97 aa11.47□□□□□ -0.57
LRCH3-201ENST00000334859 PLA2G2DQ9UNK4 145 aa11.47□□□□□ -0.57
LRCH3-201ENST00000334859 STAB2Q8WWQ8 2551 aa11.46□□□□□ -0.57
LRCH3-201ENST00000334859 CXCL6P80162 114 aa11.45□□□□□ -0.58
LRCH3-201ENST00000334859 SCXQ7RTU7 201 aa11.45□□□□□ -0.58
LRCH3-201ENST00000334859 DNAH1Q9P2D7 4330 aa11.44□□□□□ -0.58
LRCH3-201ENST00000334859 FAM19A5Q7Z5A7 132 aaPredicted RBP11.44□□□□□ -0.58
LRCH3-201ENST00000334859 Q6ZRX8 168 aa11.44□□□□□ -0.58
LRCH3-201ENST00000334859 ETDCA0A1B0GVM5 59 aa11.43□□□□□ -0.58
LRCH3-201ENST00000334859 IGLV1-50A0A075B6I6 118 aa11.43□□□□□ -0.58
LRCH3-201ENST00000334859 PRYO14603 147 aa11.43□□□□□ -0.58
LRCH3-201ENST00000334859 IGLV5-37A0A075B6J1 123 aa11.42□□□□□ -0.58
LRCH3-201ENST00000334859 DHRS4-AS1Q9P1J3 65 aa11.42□□□□□ -0.58
LRCH3-201ENST00000334859 Q8N377 158 aa11.42□□□□□ -0.58
LRCH3-201ENST00000334859 KRTAP7-1Q8IUC3 87 aa11.41□□□□□ -0.58
LRCH3-201ENST00000334859 LOC107984640A0A0U1RRK4 108 aa11.4□□□□□ -0.58
LRCH3-201ENST00000334859 Q9BRP9 147 aa11.4□□□□□ -0.58
LRCH3-201ENST00000334859 MRPL55Q7Z7F7 128 aaKnown RBP11.4□□□□□ -0.58
LRCH3-201ENST00000334859 KRTAP4-16G5E9R7 235 aaPredicted RBP11.39□□□□□ -0.59
LRCH3-201ENST00000334859 COL7A1Q02388 2944 aa11.39□□□□□ -0.59
LRCH3-201ENST00000334859 C3orf84H3BNL1 204 aa11.37□□□□□ -0.59
LRCH3-201ENST00000334859 SPRR1AP35321 89 aa11.37□□□□□ -0.59
LRCH3-201ENST00000334859 ST20-AS1Q8NBB2 130 aa11.35□□□□□ -0.59
LRCH3-201ENST00000334859 LYSTQ99698 3801 aa11.35□□□□□ -0.59
LRCH3-201ENST00000334859 KRTAP1-5Q9BYS1 174 aa11.35□□□□□ -0.59
LRCH3-201ENST00000334859 TMEM258P61165 79 aa11.34□□□□□ -0.59
LRCH3-201ENST00000334859 NREPQ16612 68 aa11.34□□□□□ -0.59
LRCH3-201ENST00000334859 C20orf197Q8N268 126 aa11.34□□□□□ -0.59
LRCH3-201ENST00000334859 IGLV5-48A0A075B6I7 105 aa11.34□□□□□ -0.59
LRCH3-201ENST00000334859 UBE2BP63146 152 aa11.34□□□□□ -0.59
LRCH3-201ENST00000334859 PSCAO43653 123 aa11.33□□□□□ -0.6
LRCH3-201ENST00000334859 UBE2DNLQ8IWF7 75 aa11.33□□□□□ -0.6
LRCH3-201ENST00000334859 TRAV7A0A075B6U4 112 aa11.33□□□□□ -0.6
LRCH3-201ENST00000334859 IGKV2-24A0A0C4DH68 120 aa11.32□□□□□ -0.6
LRCH3-201ENST00000334859 Q8N9L7 120 aa11.32□□□□□ -0.6
LRCH3-201ENST00000334859 BCE1O60756 84 aa11.32□□□□□ -0.6
LRCH3-201ENST00000334859 ERC2-IT1O76042 136 aa11.31□□□□□ -0.6
LRCH3-201ENST00000334859 FUSP35637 526 aaKnown RBP eCLIP11.31□□□□□ -0.6
LRCH3-201ENST00000334859 REG3GQ6UW15 175 aa11.31□□□□□ -0.6
LRCH3-201ENST00000334859 DNAH10Q8IVF4 4471 aa11.3□□□□□ -0.6
LRCH3-201ENST00000334859 A0A096LNI7 61 aa11.29□□□□□ -0.6
LRCH3-201ENST00000334859 J3KT08 172 aa11.29□□□□□ -0.6
LRCH3-201ENST00000334859 C1orf137Q5JT78 98 aa11.29□□□□□ -0.6
LRCH3-201ENST00000334859 TENM2Q9NT68 2774 aa11.28□□□□□ -0.6
LRCH3-201ENST00000334859 BPY2O14599 106 aa11.28□□□□□ -0.6
LRCH3-201ENST00000334859 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.26□□□□□ -0.61
LRCH3-201ENST00000334859 TNP2Q05952 138 aa11.26□□□□□ -0.61
LRCH3-201ENST00000334859 A0A1W2PNM2 257 aa11.26□□□□□ -0.61
LRCH3-201ENST00000334859 C16orf90A8MZG2 172 aa11.26□□□□□ -0.61
LRCH3-201ENST00000334859 CNBPP62633 177 aaKnown RBP11.25□□□□□ -0.61
LRCH3-201ENST00000334859 IGKV4-1P06312 121 aa11.25□□□□□ -0.61
LRCH3-201ENST00000334859 APLNQ9ULZ1 77 aa11.23□□□□□ -0.61
LRCH3-201ENST00000334859 A0A1W2PNN7 141 aa11.23□□□□□ -0.61
LRCH3-201ENST00000334859 Q8NBF4 154 aa11.23□□□□□ -0.61
LRCH3-201ENST00000334859 PRLHP81277 87 aa11.22□□□□□ -0.61
LRCH3-201ENST00000334859 DNAH9Q9NYC9 4486 aa11.22□□□□□ -0.61
LRCH3-201ENST00000334859 DPH3Q96FX2 82 aa11.21□□□□□ -0.61
LRCH3-201ENST00000334859 SNURFQ9Y675 71 aa11.21□□□□□ -0.61
LRCH3-201ENST00000334859 A0A1B0GW54 56 aa11.2□□□□□ -0.62
LRCH3-201ENST00000334859 F8WEM9 126 aa11.2□□□□□ -0.62
LRCH3-201ENST00000334859 C14orf177Q52M58 125 aa11.19□□□□□ -0.62
LRCH3-201ENST00000334859 HIGD2AQ9BW72 106 aa11.19□□□□□ -0.62
LRCH3-201ENST00000334859 CHTF8P0CG12 524 aa11.18□□□□□ -0.62
LRCH3-201ENST00000334859 RPS28P62857 69 aaKnown RBP11.18□□□□□ -0.62
LRCH3-201ENST00000334859 KLKP1Q107X0 134 aa11.18□□□□□ -0.62
LRCH3-201ENST00000334859 SMIM29Q86T20 159 aa11.17□□□□□ -0.62
LRCH3-201ENST00000334859 LINC00476Q8WZB0 136 aa11.17□□□□□ -0.62
LRCH3-201ENST00000334859 H7BZZ5 65 aa11.16□□□□□ -0.62
LRCH3-201ENST00000334859 B9D2Q9BPU9 175 aa11.16□□□□□ -0.62
LRCH3-201ENST00000334859 CSMD3Q7Z407 3707 aa11.16□□□□□ -0.62
LRCH3-201ENST00000334859 SPRR4Q96PI1 79 aa11.16□□□□□ -0.62
LRCH3-201ENST00000334859 FAM236DA0A1B0GTK5 79 aa11.15□□□□□ -0.62
LRCH3-201ENST00000334859 FAM236CP0DP71 79 aa11.15□□□□□ -0.62
LRCH3-201ENST00000334859 MDFIQ99750 246 aa11.14□□□□□ -0.63
LRCH3-201ENST00000334859 DNAH7Q8WXX0 4024 aa11.14□□□□□ -0.63
LRCH3-201ENST00000334859 A0A0G2JQZ4 141 aa11.14□□□□□ -0.63
LRCH3-201ENST00000334859 PHF5AQ7RTV0 110 aaKnown RBP11.14□□□□□ -0.63
LRCH3-201ENST00000334859 DYNC2H1Q8NCM8 4307 aaKnown RBP11.11□□□□□ -0.63
LRCH3-201ENST00000334859 OXTP01178 125 aa11.1□□□□□ -0.63
LRCH3-201ENST00000334859 IGFL1Q6UW32 110 aa11.1□□□□□ -0.63
LRCH3-201ENST00000334859 SRRM2Q9UQ35 2752 aaKnown RBP11.1□□□□□ -0.63
LRCH3-201ENST00000334859 NBDYA0A0U1RRE5 68 aa11.1□□□□□ -0.63
LRCH3-201ENST00000334859 KRTAP11-1Q8IUC1 163 aa11.1□□□□□ -0.63
LRCH3-201ENST00000334859 TMEM254Q8TBM7 123 aa11.1□□□□□ -0.63
LRCH3-201ENST00000334859 OCR1Q9BZK8 76 aa11.1□□□□□ -0.63
LRCH3-201ENST00000334859 LRCOL1A6NCL2 159 aa11.07□□□□□ -0.64
LRCH3-201ENST00000334859 NUPR2A6NF83 97 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms