RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 SPINK1P00995 79 aa11.31□□□□□ -0.6
TRAPPC11-201ENST00000334690 IGKV2-30P06310 120 aa11.31□□□□□ -0.6
TRAPPC11-201ENST00000334690 AKAP13Q12802 2813 aa11.31□□□□□ -0.6
TRAPPC11-201ENST00000334690 C4orf26Q17RF5 130 aa11.29□□□□□ -0.6
TRAPPC11-201ENST00000334690 SPACA4Q8TDM5 124 aa11.28□□□□□ -0.6
TRAPPC11-201ENST00000334690 KRTAP10-3P60369 221 aa11.28□□□□□ -0.6
TRAPPC11-201ENST00000334690 KRTAP1-3Q8IUG1 177 aa11.28□□□□□ -0.6
TRAPPC11-201ENST00000334690 MGAQ8IWI9 3026 aa11.27□□□□□ -0.6
TRAPPC11-201ENST00000334690 ACYP2P14621 99 aa11.27□□□□□ -0.6
TRAPPC11-201ENST00000334690 A8MWP4 228 aa11.26□□□□□ -0.61
TRAPPC11-201ENST00000334690 K7EQZ3 153 aa11.26□□□□□ -0.61
TRAPPC11-201ENST00000334690 TLX1NBP0CAT3 122 aa11.26□□□□□ -0.61
TRAPPC11-201ENST00000334690 KRTAP10-11P60412 298 aa11.26□□□□□ -0.61
TRAPPC11-201ENST00000334690 RPL37AP61513 92 aaKnown RBP11.26□□□□□ -0.61
TRAPPC11-201ENST00000334690 KLKP1Q107X0 134 aa11.25□□□□□ -0.61
TRAPPC11-201ENST00000334690 Q8N377 158 aa11.25□□□□□ -0.61
TRAPPC11-201ENST00000334690 PLA2G2DQ9UNK4 145 aa11.24□□□□□ -0.61
TRAPPC11-201ENST00000334690 LAMA2P24043 3122 aaKnown RBP11.24□□□□□ -0.61
TRAPPC11-201ENST00000334690 C9orf129Q5T035 196 aaKnown RBP11.24□□□□□ -0.61
TRAPPC11-201ENST00000334690 LINC01600Q96MT4 127 aa11.23□□□□□ -0.61
TRAPPC11-201ENST00000334690 LAMA3Q16787 3333 aa11.22□□□□□ -0.61
TRAPPC11-201ENST00000334690 K7EIL1 84 aa11.22□□□□□ -0.61
TRAPPC11-201ENST00000334690 KRTAP1-1Q07627 177 aa11.21□□□□□ -0.62
TRAPPC11-201ENST00000334690 IGFL1Q6UW32 110 aa11.21□□□□□ -0.62
TRAPPC11-201ENST00000334690 LINC00313P59037 77 aa11.2□□□□□ -0.62
TRAPPC11-201ENST00000334690 A0A1B0GU69 56 aa11.19□□□□□ -0.62
TRAPPC11-201ENST00000334690 CHD6Q8TD26 2715 aa11.19□□□□□ -0.62
TRAPPC11-201ENST00000334690 LOC101927531A0A1B0GV80 90 aa11.18□□□□□ -0.62
TRAPPC11-201ENST00000334690 C7orf65Q6ZTY9 151 aa11.18□□□□□ -0.62
TRAPPC11-201ENST00000334690 MKI67P46013 3256 aaKnown RBP11.18□□□□□ -0.62
TRAPPC11-201ENST00000334690 SPAG11AQ6PDA7 123 aa11.17□□□□□ -0.62
TRAPPC11-201ENST00000334690 C9orf163Q8N9P6 203 aa11.16□□□□□ -0.62
TRAPPC11-201ENST00000334690 C8orf87E5RJ46 101 aa11.16□□□□□ -0.62
TRAPPC11-201ENST00000334690 PRR15Q8IV56 129 aa11.16□□□□□ -0.62
TRAPPC11-201ENST00000334690 MRPL34Q9BQ48 92 aaKnown RBP11.15□□□□□ -0.62
TRAPPC11-201ENST00000334690 FAM229AH3BQW9 127 aa11.14□□□□□ -0.63
TRAPPC11-201ENST00000334690 TYMSOSQ8TAI1 123 aa11.14□□□□□ -0.63
TRAPPC11-201ENST00000334690 FAM104AQ969W3 186 aa11.13□□□□□ -0.63
TRAPPC11-201ENST00000334690 OBSCN-AS1Q96MR7 158 aa11.12□□□□□ -0.63
TRAPPC11-201ENST00000334690 WDFY4Q6ZS81 3184 aa11.11□□□□□ -0.63
TRAPPC11-201ENST00000334690 H7BZZ5 65 aa11.1□□□□□ -0.63
TRAPPC11-201ENST00000334690 WWC2-AS2Q96NR7 200 aa11.09□□□□□ -0.63
TRAPPC11-201ENST00000334690 ZNF861PO60384 105 aa11.08□□□□□ -0.64
TRAPPC11-201ENST00000334690 SSBP3-AS1Q7Z2R9 100 aa11.08□□□□□ -0.64
TRAPPC11-201ENST00000334690 MAP1AP78559 2803 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC11-201ENST00000334690 A0A1W2PNM2 257 aa11.07□□□□□ -0.64
TRAPPC11-201ENST00000334690 C8orf17Q9NRJ1 99 aa11.07□□□□□ -0.64
TRAPPC11-201ENST00000334690 IGLV5-48A0A075B6I7 105 aa11.06□□□□□ -0.64
TRAPPC11-201ENST00000334690 CNBPP62633 177 aaKnown RBP11.06□□□□□ -0.64
TRAPPC11-201ENST00000334690 A0A087WTM6 91 aa11.04□□□□□ -0.64
TRAPPC11-201ENST00000334690 IGLV5-37A0A075B6J1 123 aa11.04□□□□□ -0.64
TRAPPC11-201ENST00000334690 BRCA2P51587 3418 aa11.03□□□□□ -0.64
TRAPPC11-201ENST00000334690 COA5Q86WW8 74 aa11.03□□□□□ -0.64
TRAPPC11-201ENST00000334690 TEX15Q9BXT5 2789 aa11.03□□□□□ -0.64
TRAPPC11-201ENST00000334690 A0A1B0GVX0 72 aa11.02□□□□□ -0.64
TRAPPC11-201ENST00000334690 CASC10Q5T4H9 136 aa11.02□□□□□ -0.64
TRAPPC11-201ENST00000334690 STAB1Q9NY15 2570 aa11.02□□□□□ -0.64
TRAPPC11-201ENST00000334690 A0A1W2PNN7 141 aa11.02□□□□□ -0.64
TRAPPC11-201ENST00000334690 CYP4F30PQ9H0H9 118 aa11.02□□□□□ -0.65
TRAPPC11-201ENST00000334690 PLA2G1BP04054 148 aaKnown RBP11.01□□□□□ -0.65
TRAPPC11-201ENST00000334690 PRUNE2Q8WUY3 3088 aa11.01□□□□□ -0.65
TRAPPC11-201ENST00000334690 TEP1Q99973 2627 aaKnown RBP11.01□□□□□ -0.65
TRAPPC11-201ENST00000334690 A0A0G2JQZ4 141 aa11.01□□□□□ -0.65
TRAPPC11-201ENST00000334690 A8MUN3 132 aa11.01□□□□□ -0.65
TRAPPC11-201ENST00000334690 DSPP15924 2871 aaKnown RBP11□□□□□ -0.65
TRAPPC11-201ENST00000334690 Q96NJ1 140 aa10.99□□□□□ -0.65
TRAPPC11-201ENST00000334690 ATP11AUNQ6ZP68 121 aa10.98□□□□□ -0.65
TRAPPC11-201ENST00000334690 GCN1Q92616 2671 aaKnown RBP10.98□□□□□ -0.65
TRAPPC11-201ENST00000334690 CR1P17927 2039 aa10.97□□□□□ -0.65
TRAPPC11-201ENST00000334690 WIPF1O43516 503 aa10.96□□□□□ -0.65
TRAPPC11-201ENST00000334690 APLNQ9ULZ1 77 aa10.96□□□□□ -0.65
TRAPPC11-201ENST00000334690 TRIOO75962 3097 aa10.95□□□□□ -0.66
TRAPPC11-201ENST00000334690 SPRR4Q96PI1 79 aa10.94□□□□□ -0.66
TRAPPC11-201ENST00000334690 UNC79Q9P2D8 2635 aa10.94□□□□□ -0.66
TRAPPC11-201ENST00000334690 VPS13AQ96RL7 3174 aa10.93□□□□□ -0.66
TRAPPC11-201ENST00000334690 COL6A5A8TX70 2615 aa10.93□□□□□ -0.66
TRAPPC11-201ENST00000334690 NOTCH1P46531 2555 aa10.92□□□□□ -0.66
TRAPPC11-201ENST00000334690 PSORS1C2Q9UIG4 136 aa10.92□□□□□ -0.66
TRAPPC11-201ENST00000334690 DSCR10P59022 87 aa10.9□□□□□ -0.66
TRAPPC11-201ENST00000334690 UNC80Q8N2C7 3258 aa10.9□□□□□ -0.66
TRAPPC11-201ENST00000334690 IGLV7-43P04211 117 aa10.89□□□□□ -0.67
TRAPPC11-201ENST00000334690 LINC00336Q6ZUF6 198 aa10.89□□□□□ -0.67
TRAPPC11-201ENST00000334690 SPANXA2-OT1Q8N9U9 137 aa10.88□□□□□ -0.67
TRAPPC11-201ENST00000334690 NBEAL1Q6ZS30 2694 aa10.88□□□□□ -0.67
TRAPPC11-201ENST00000334690 OCR1Q9BZK8 76 aa10.88□□□□□ -0.67
TRAPPC11-201ENST00000334690 UQCR11O14957 56 aa10.86□□□□□ -0.67
TRAPPC11-201ENST00000334690 ANAPC11Q9NYG5 84 aa10.86□□□□□ -0.67
TRAPPC11-201ENST00000334690 IGLV8-61A0A075B6I0 122 aa10.85□□□□□ -0.67
TRAPPC11-201ENST00000334690 LINC00304Q8N9R0 145 aa10.85□□□□□ -0.67
TRAPPC11-201ENST00000334690 IGSF10Q6WRI0 2623 aa10.83□□□□□ -0.68
TRAPPC11-201ENST00000334690 SETXQ7Z333 2677 aaKnown RBP10.83□□□□□ -0.68
TRAPPC11-201ENST00000334690 FRYQ5TBA9 3013 aa10.83□□□□□ -0.68
TRAPPC11-201ENST00000334690 XIRP2A4UGR9 3374 aa10.81□□□□□ -0.68
TRAPPC11-201ENST00000334690 UBR5O95071 2799 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC11-201ENST00000334690 Q8NDZ9 215 aa10.78□□□□□ -0.68
TRAPPC11-201ENST00000334690 NBEAL2Q6ZNJ1 2754 aa10.76□□□□□ -0.69
TRAPPC11-201ENST00000334690 SPRR1AP35321 89 aa10.76□□□□□ -0.69
TRAPPC11-201ENST00000334690 CD164Q04900 197 aa10.7□□□□□ -0.7
TRAPPC11-201ENST00000334690 MIR22HGQ0VDD5 57 aa10.7□□□□□ -0.7
TRAPPC11-201ENST00000334690 FLNCQ14315 2725 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms