RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 C4orf26Q17RF5 130 aa8.07□□□□□ -1.12
HDAC6-201ENST00000334136 SYCNQ0VAF6 134 aa8.07□□□□□ -1.12
HDAC6-201ENST00000334136 LINC01547P58512 204 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-201ENST00000334136 WFDC13Q8IUB5 93 aa8.07□□□□□ -1.12
HDAC6-201ENST00000334136 SERP1Q9Y6X1 66 aa8.07□□□□□ -1.12
HDAC6-201ENST00000334136 H0Y9J4 135 aa8.06□□□□□ -1.12
HDAC6-201ENST00000334136 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-201ENST00000334136 M0R378 163 aa8.05□□□□□ -1.12
HDAC6-201ENST00000334136 LINC00575Q6W349 94 aa8.05□□□□□ -1.12
HDAC6-201ENST00000334136 LINC00612Q8N6U2 182 aa8.05□□□□□ -1.12
HDAC6-201ENST00000334136 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-201ENST00000334136 A0A1B0GUV1 79 aa8.04□□□□□ -1.12
HDAC6-201ENST00000334136 TENM1Q9UKZ4 2725 aa8.04□□□□□ -1.12
HDAC6-201ENST00000334136 ZFHX3Q15911 3703 aa8.03□□□□□ -1.12
HDAC6-201ENST00000334136 NDUFB1O75438 58 aa8.03□□□□□ -1.12
HDAC6-201ENST00000334136 CSMD2Q7Z408 3487 aa8.02□□□□□ -1.13
HDAC6-201ENST00000334136 UBE2AP49459 152 aa8.02□□□□□ -1.13
HDAC6-201ENST00000334136 LINC00588Q9Y4M8 146 aa8.01□□□□□ -1.13
HDAC6-201ENST00000334136 LINC01556Q5JQF7 62 aa8.01□□□□□ -1.13
HDAC6-201ENST00000334136 TMEM254Q8TBM7 123 aa8.01□□□□□ -1.13
HDAC6-201ENST00000334136 C1orf134Q5TEV5 83 aa8□□□□□ -1.13
HDAC6-201ENST00000334136 V9GYY9 64 aa8□□□□□ -1.13
HDAC6-201ENST00000334136 ATP5EP56381 51 aaPredicted RBP8□□□□□ -1.13
HDAC6-201ENST00000334136 C10orf25Q5T742 122 aa7.99□□□□□ -1.13
HDAC6-201ENST00000334136 C1orf195Q5TG92 126 aa7.99□□□□□ -1.13
HDAC6-201ENST00000334136 LINC01561Q8N1V8 128 aa7.99□□□□□ -1.13
HDAC6-201ENST00000334136 C9orf129Q5T035 196 aaKnown RBP7.98□□□□□ -1.13
HDAC6-201ENST00000334136 TRBV7-6A0A0J9YX20 115 aa7.97□□□□□ -1.13
HDAC6-201ENST00000334136 PRYO14603 147 aa7.97□□□□□ -1.13
HDAC6-201ENST00000334136 RPS28P62857 69 aaKnown RBP7.97□□□□□ -1.13
HDAC6-201ENST00000334136 DEFB116Q30KQ4 102 aa7.96□□□□□ -1.13
HDAC6-201ENST00000334136 C1orf137Q5JT78 98 aa7.96□□□□□ -1.13
HDAC6-201ENST00000334136 PSPHP1O15172 72 aa7.96□□□□□ -1.13
HDAC6-201ENST00000334136 VPS13CQ709C8 3753 aa7.96□□□□□ -1.14
HDAC6-201ENST00000334136 STAB2Q8WWQ8 2551 aa7.95□□□□□ -1.14
HDAC6-201ENST00000334136 NBDYA0A0U1RRE5 68 aa7.95□□□□□ -1.14
HDAC6-201ENST00000334136 IGKV4-1P06312 121 aa7.95□□□□□ -1.14
HDAC6-201ENST00000334136 LINC00208Q96KT6 92 aa7.94□□□□□ -1.14
HDAC6-201ENST00000334136 DHRS4-AS1Q9P1J3 65 aa7.94□□□□□ -1.14
HDAC6-201ENST00000334136 Q6ZRU5 148 aa7.93□□□□□ -1.14
HDAC6-201ENST00000334136 Q6ZQT0 140 aa7.92□□□□□ -1.14
HDAC6-201ENST00000334136 DNAH10OSP0CZ25 163 aa7.92□□□□□ -1.14
HDAC6-201ENST00000334136 APLNQ9ULZ1 77 aa7.92□□□□□ -1.14
HDAC6-201ENST00000334136 CUBNO60494 3623 aa7.91□□□□□ -1.14
HDAC6-201ENST00000334136 CHKB-CPT1BH3BT56 60 aa7.91□□□□□ -1.14
HDAC6-201ENST00000334136 CXCL6P80162 114 aa7.91□□□□□ -1.14
HDAC6-201ENST00000334136 PRO0628Q9UI54 55 aa7.9□□□□□ -1.14
HDAC6-201ENST00000334136 A6NED7 52 aa7.89□□□□□ -1.15
HDAC6-201ENST00000334136 C6orf48Q9UBA6 75 aa7.89□□□□□ -1.15
HDAC6-201ENST00000334136 FBN1P35555 2871 aaKnown RBP7.87□□□□□ -1.15
HDAC6-201ENST00000334136 SMIM29Q86T20 159 aa7.87□□□□□ -1.15
HDAC6-201ENST00000334136 A0A087WSZ3 146 aa7.87□□□□□ -1.15
HDAC6-201ENST00000334136 IGLV5-52A0A0A0MRZ9 124 aa7.87□□□□□ -1.15
HDAC6-201ENST00000334136 KIAA0087Q14695 138 aa7.87□□□□□ -1.15
HDAC6-201ENST00000334136 MRPL55Q7Z7F7 128 aaKnown RBP7.87□□□□□ -1.15
HDAC6-201ENST00000334136 VWFP04275 2813 aa7.87□□□□□ -1.15
HDAC6-201ENST00000334136 PMAIP1Q13794 54 aa7.86□□□□□ -1.15
HDAC6-201ENST00000334136 FAM104AQ969W3 186 aa7.85□□□□□ -1.15
HDAC6-201ENST00000334136 CASC10Q5T4H9 136 aa7.85□□□□□ -1.15
HDAC6-201ENST00000334136 SPINK6Q6UWN8 80 aa7.84□□□□□ -1.15
HDAC6-201ENST00000334136 C2orf48Q96LS8 159 aa7.84□□□□□ -1.15
HDAC6-201ENST00000334136 LINC00474Q9P2X8 69 aa7.84□□□□□ -1.15
HDAC6-201ENST00000334136 LOC110117498A0A087WWA1 95 aa7.82□□□□□ -1.16
HDAC6-201ENST00000334136 PRR15LQ9BU68 103 aa7.82□□□□□ -1.16
HDAC6-201ENST00000334136 ANK3Q12955 4377 aaKnown RBP7.81□□□□□ -1.16
HDAC6-201ENST00000334136 IGLV9-49A0A0B4J1Y8 123 aa7.81□□□□□ -1.16
HDAC6-201ENST00000334136 PRLHP81277 87 aa7.81□□□□□ -1.16
HDAC6-201ENST00000334136 C7orf33Q8WU49 177 aa7.81□□□□□ -1.16
HDAC6-201ENST00000334136 PCOTHQ58A44 107 aa7.81□□□□□ -1.16
HDAC6-201ENST00000334136 LINC00476Q8WZB0 136 aa7.81□□□□□ -1.16
HDAC6-201ENST00000334136 F8WDY8 70 aa7.8□□□□□ -1.16
HDAC6-201ENST00000334136 ELOF1P60002 83 aaKnown RBP7.8□□□□□ -1.16
HDAC6-201ENST00000334136 LINC00336Q6ZUF6 198 aa7.8□□□□□ -1.16
HDAC6-201ENST00000334136 PRR34Q9NV39 138 aa7.8□□□□□ -1.16
HDAC6-201ENST00000334136 BCE1O60756 84 aa7.79□□□□□ -1.16
HDAC6-201ENST00000334136 REG3GQ6UW15 175 aa7.79□□□□□ -1.16
HDAC6-201ENST00000334136 CASC2Q6XLA1 102 aa7.78□□□□□ -1.16
HDAC6-201ENST00000334136 HCG22E2RYF7 251 aa7.78□□□□□ -1.16
HDAC6-201ENST00000334136 H7BZZ5 65 aa7.78□□□□□ -1.16
HDAC6-201ENST00000334136 LINC01600Q96MT4 127 aa7.77□□□□□ -1.17
HDAC6-201ENST00000334136 CYSTM1Q9H1C7 97 aa7.77□□□□□ -1.17
HDAC6-201ENST00000334136 IGLV6-57P01721 117 aa7.77□□□□□ -1.17
HDAC6-201ENST00000334136 H0Y9P7 68 aa7.76□□□□□ -1.17
HDAC6-201ENST00000334136 ST20-AS1Q8NBB2 130 aa7.76□□□□□ -1.17
HDAC6-201ENST00000334136 C22orf24Q9Y442 160 aa7.76□□□□□ -1.17
HDAC6-201ENST00000334136 Q9BRP9 147 aa7.76□□□□□ -1.17
HDAC6-201ENST00000334136 LINC00167Q96N53 147 aa7.75□□□□□ -1.17
HDAC6-201ENST00000334136 KLKP1Q107X0 134 aa7.74□□□□□ -1.17
HDAC6-201ENST00000334136 VPREB1P12018 145 aa7.73□□□□□ -1.17
HDAC6-201ENST00000334136 Q6ZRP5 223 aa7.73□□□□□ -1.17
HDAC6-201ENST00000334136 GVQW2A0A096LPI5 108 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-201ENST00000334136 RTL8CO15255 209 aa7.72□□□□□ -1.17
HDAC6-201ENST00000334136 Q8NBF4 154 aa7.71□□□□□ -1.17
HDAC6-201ENST00000334136 TENM3Q9P273 2699 aa7.71□□□□□ -1.17
HDAC6-201ENST00000334136 PKD1L1Q8TDX9 2849 aa7.71□□□□□ -1.18
HDAC6-201ENST00000334136 IGHV6-1A0A0B4J1U7 121 aa7.7□□□□□ -1.18
HDAC6-201ENST00000334136 C16orf90A8MZG2 172 aa7.7□□□□□ -1.18
HDAC6-201ENST00000334136 A0A087WTM6 91 aa7.7□□□□□ -1.18
HDAC6-201ENST00000334136 C1orf64Q8NEQ6 169 aa7.7□□□□□ -1.18
HDAC6-201ENST00000334136 Q6ZRX8 168 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms